BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927054
Length=3147
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76580.1 | Symbols: | Squamosa promoter-binding protein-lik... 4397 0.0
AT1G20980.1 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa ... 2100 0.0
> AT1G76580.1 | Symbols: | Squamosa promoter-binding protein-like
(SBP domain) transcription factor family protein | chr1:28734234-28738917
FORWARD LENGTH=3686
Length=3686
Score = 4397 bits (2381), Expect = 0.0
Identities = 2722/2889 (94%), Gaps = 13/2889 (0%)
Strand=Plus/Plus
Query 264 AAAGAGGCCTTGATTTGAATCTACCTAGTGGTTTTAATGAT-TTGGAAGACACGCCGGTG 322
||| ||| |||||||||||||||||| |||||||||| ||| || |||| ||||||||||
Sbjct 360 AAAAAGGTCTTGATTTGAATCTACCTTGTGGTTTTAACGATGTT-GAAGGCACGCCGGTG 418
Query 323 GATTTAACCAGACCTAGTAAGAAGGTTAGGTCGGGATCTACGGGAAGTGGCGGCGGAGGA 382
|||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||
Sbjct 419 GATTTAACCAGACCGAGTAAGAAGGTTAGGTCGGGATCTCCGGGAAGTGGCGGC---GGA 475
Query 383 GGAGGAGGAAACTATCCAAAGTGTCAGGTTGATAATTGTAAGGAAGATTTATCAATTGCT 442
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 GGAGGAGGAAACTATCCGAAGTGTCAGGTTGATAATTGTAAGGAAGATTTATCAATTGCT 535
Query 443 AAGGATTATCATAGAAGACATAAAGTATGTGAGGTTCATAGCAAAGCTACTAAAGCTCTT 502
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 536 AAGGATTATCATAGAAGACATAAAGTTTGTGAGGTTCATAGCAAAGCTACTAAAGCTCTT 595
Query 503 GTTGGGAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAG 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 GTTGGGAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAG 655
Query 563 TTTGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGATGGCCATAACAGGCGGAGGAGA 622
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 656 TTTGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGATGGTCATAACAGGCGGAGGAGA 715
Query 623 AAAACGCTGCCCGATGTGATTACGTCTCAGGTTGTAGCTCTCGAGAATCGTGATAATACT 682
||||| | |||||||| |||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 716 AAAACACAGCCCGATGCGATTACATCTCAGGTTGTAGCTCTGGAGAATCGTGATAATACT 775
Query 683 TCTAATAACGCTAATATGGATGTTATGGCTTTGTTAACGGCTTTAGTTTGTGCACAAGGT 742
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 776 TCTAATAACACTAATATGGATGTTATGGCTTTGTTAACAGCTTTAGTTTGTGCACAAGGT 835
Query 743 AAGAACGAGGCTATTACTAATGGGTCTCCGGGAGTGCCTGATAGAGAGCAGCTTCTTCAG 802
| ||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||
Sbjct 836 AGGAACGAGGCTACTACTAATGGGTCTCCGGGAGTGCCTCAAAGAGAGCAACTTCTTCAG 895
Query 803 ATACTTAACAAGATCAAGGCTTTACCTTTGCCTATGGATCTTGCCTCAAAGTTGAACAAT 862
|||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||
Sbjct 896 ATACTTAACAAGATCAAGGCTTTACCTTTGCCTATGAATCTTACCTCGAAGTTGAACAAT 955
Query 863 ATCGGAATTTTAGCCAGGGAAAATCCGGATCAACCTTCCGCGATGAACCCTCAAAATAGT 922
|||||||||||||||||| |||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct 956 ATCGGAATTTTAGCCAGGAAAAATCCGGAGCAACCCTCCCCGATGAATCCTCAAAATAGT 1015
Query 923 ATGAATGGAGCTTCTTCTCCATCTACCATGGACTTACTTGCTGCTCTCTCGGCAACTTTA 982
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct 1016 ATGAATGGGGCTTCTTCTCCATCTACGATGGACTTGCTTGCTGCTCTCTCGGCATCTTTA 1075
Query 983 GGTTCATCTGCTCCCGAGGCCATAGCTTTTTTATCTCAAGGAGGGTTTGGTAACAAAGAA 1042
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 GGTTCATCTGCTCCAGAGGCCATAGCTTTTTTATCTCAAGGAGGGTTTGGTAACAAAGAA 1135
Query 1043 AACAATGATAGTACTAAGTTAACTTCTTCTGACCACGGCGTTACAACCAATGTAGAAAAG 1102
| ||||||||| |||||||||||||||||||||||| ||| ||||||| | ||||||||
Sbjct 1136 AGCAATGATAGGACTAAGTTAACTTCTTCTGACCACAGCGCCACAACCAGTTTAGAAAAG 1195
Query 1103 AGAACTTTGGAGTTTCCTTCTTTTGGGAGAGGAGAGAGGACAAGTAGCAGTAAACATTCT 1162
| ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||
Sbjct 1196 AAAACTTTGGAGTTTCCTTCTTTTGGGGGAGGAGAGAGGACAAGTAGCACTAACCATTCT 1255
Query 1163 CCTTCTCAGGATTCAGATTCACGCGGTCAGGACACGAGATCTAGCTTATCTTTACAACTA 1222
|| |||||| ||||||||||||||||||| ||||| ||||| ||||||||| ||||||||
Sbjct 1256 CCATCTCAGTATTCAGATTCACGCGGTCAAGACACTAGATCGAGCTTATCTCTACAACTA 1315
Query 1223 TTCACCTCTTCACCAGAGGATGAGAGTCAACCAACAGTTGCATCTTCAACAAAGTATTAT 1282
||||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||||
Sbjct 1316 TTCACCTCTTCACCAGAAGAGGAGAGTCGACCAAAAGTTGCATCTTCAACAAAGTATTAT 1375
Query 1283 TCTTCTGCGAGCAGTAACCCTGTTGAGGATAGATCTCCATCATCGTCTCCGGTCGTGCAA 1342
||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||
Sbjct 1376 TCTTCTGCGAGCAGTAACCCTGTTGAGGATAGATCACCATCATCATCTCCAGTCATGCAA 1435
Query 1343 GAGTTGTTCCCTTTGCATACTTCTCCTGGAACCAGGAGGTCTAACAATTACAAAAACACT 1402
||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct 1436 GAGTTATTCCCTTTGCATACTTCTCCTGAAACCAGGAGGTATAACAATTACAAAGACACT 1495
Query 1403 AGTCCCA-TCCCCAGGACCAGTTGTTTGCCCCTAGAGCTCTTTGGTGCATCAAACAGAGG 1461
||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1496 AGTACCAGTCCC-AGGACCAGTTGTTTGCCCCTAGAGCTCTTTGGTGCATCAAATAGAGG 1554
Query 1462 AGCTACTGCAAATCCTAATTCCAATGTTTCT-AGGCATCAATCTGGTTATGCTTCATCTG 1520
|||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct 1555 AGCTACTGCAAATCCTAATTACAATGTTT-TGAGGCATCAATCTGGTTATGCTTCATCTG 1613
Query 1521 GTTCGGATTATTCTCCTCCTAGCTTAAACTCTGATGCTCAGGACCGCACCGGAAAGATCA 1580
|||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||| |
Sbjct 1614 GTTCGGATTATTCTCCTCCTAGCTTAAACTCTAATGCTCAGGAGCGCACAGGAAAGAT-A 1672
Query 1581 T-TTTCAAACTATTTGAAAAAGATCCTAGTCAGCTCCCTGGCACATTGCGAACCGAGAT- 1638
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1673 TCTTTCAAACTATTTGAAAAAGATCCTAGTCAGCTCCCTAACACATTGCGAACCGAGATC 1732
Query 1639 TTATAGATGGCTTTCTAGCTTTCCATCAGAAATGGAGAGTTATATCAGGCCTGGTTGTGT 1698
|| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1733 TT-TAGATGGCTTTCTAGTTTTCCATCAGATATGGAGAGTTTTATCAGGCCTGGTTGTGT 1791
Query 1699 TATCTTATCTGTCTATGTGGCAATGTCAGCTTCTGCTTGGGAACAACTCGAGGAAAATTT 1758
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1792 TATTTTATCTGTCTATGTGGCAATGTCAGCTTCTGCTTGGGAACAACTTGAGGAAAATTT 1851
Query 1759 ACTGCAACGGGTTAGTTCTTTGGTTCAAGATTCAGATTTTTGGAGGAATACAAGATTTTT 1818
||||||||| ||||| |||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct 1852 ACTGCAACGAGTTAGATCTTTGGTTCAAGATTCAGAATTTTGGAGTAATTCAAGATTTTT 1911
Query 1819 GGTCAATACAGGCAGACAGCTCGCATCACACAAACACGGTAGAATTCGTCTGAGCAAATC 1878
||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1912 GGTCAATGCAGGCAGACAGCTCGCGTCACACAAACATGGTAGAATTCGTCTGAGCAAATC 1971
Query 1879 TTGGAGAACTTTGAATTCACCAGAACTGATCACGGTGTCGCCGTTGGCTGTTGTAGCCGG 1938
||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||
Sbjct 1972 TTGGAGAACTTTGAATTTACCAGAGCTAATCACGGTGTCGCCGTTGGCTGTTGTAGCCGG 2031
Query 1939 TGAAGAAACAGCTTTGATAGTAAGGGGTAGAAACTTGACCAATGACGGAATTAGACTTCG 1998
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2032 TGAAGAAACAGCTTTAATAGTAAGGGGTAGAAACTTGACTAATGACGGAATGAGACTTCG 2091
Query 1999 TTGCGCACATATGGGTAACTACACGTCAATAGAGGTAACTGGAACAGAACATAGGCGAAC 2058
|||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||
Sbjct 2092 TTGCGCACATATGGGTAACTACGCGTCAATGGAGGTAACTGGAAGAGAACATAGGTTAAC 2151
Query 2059 AAAATTTGATGAGTTAAACGTTAGTAGTTTCAAAGTCCAGAGTGCAAGCCCTGTTTCTCT 2118
|||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct 2152 AAAAGTTGATGAGTTAAACGTAAGTAGTTTCCAAGTCCAGAGTGCAAGCTCTGTTTCTCT 2211
Query 2119 AGGACGCTGTTTCATTGAGGTGGAGAATGGATTCAGAGGTGACAATTTCCCTTTGATAAT 2178
|||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 2212 AGGACGATGTTTCATTGAGTTGGAGAATGGATTAAGAGGTGACAATTTCCCTTTGATAAT 2271
Query 2179 AGCCAATGCCACGATTTGCAAAGAGTTGAATTGCCTTGAAGACGAGTTTCATCCAAAAGA 2238
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 2272 AGCCAATGCCACGATTTGCAAAGAGTTGAATCGCCTTGAAGAAGAGTTTCATCCAAAAGA 2331
Query 2239 CGTGATAGAGGAACAGACACAGAACTTAGATCGTCCAAGATCAAGAGAAGAAGTTATTTG 2298
||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2332 CGTGATAGAGGAACAAATACAGAACTTAGATCGTCCAAGATCAAGAGAAGAAGTTCTTTG 2391
Query 2299 CTTCTTGAATGAGCTCGGTTGGCTATTTCAGAGGAAATGGACATCCGATATTCATGGAGA 2358
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2392 CTTCTTGAATGAGCTTGGTTGGCTATTTCAGAGGAAATGGACATCCGATATTCATGGAGA 2451
Query 2359 ATCTGACTTTTCTCTTCCCCGCTTCAAATTTTTGCTTGTATGCTCTGTTGAAAGAGATTG 2418
| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2452 ACCCGACTTTTCTCTTCCTCGCTTCAAATTTTTGCTCGTATGCTCTGTTGAAAGAGATTA 2511
Query 2419 CTGTTCTCTCATAAGAACTGTCCTGGATATGATGGTAGAGAGAAATTTGGGAAAAGATGG 2478
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 2512 CTGTTCTCTCATAAGAACCGTCCTGGATATGATGGTAGAGAGAAATTTGGGAAAAGACGG 2571
Query 2479 TCTGATGAACAAGGAGTCCTTAGATATGCTGGCTGAGACTCAGCTATTGAATCGCGCTGT 2538
|||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |
Sbjct 2572 TCTGTTGAACAAGGAGTCCTTAGATATGCTGGCTGATATTCAGCTACTGAATCGCGCTAT 2631
Query 2539 CAAAAGGAGAAATACAAAAATGGCTGAAACGCTGATTCATTACTCCGTTAATCCGTCTAC 2598
|||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct 2632 CAAAAGGAGAAACACAAAAATGGCTGAAACTCTGATCCATTATTCCGTTAATCCCTCTAC 2691
Query 2599 TAAAAACTTCATCTTCTTGCCTAATATCGCTGGACCTGGTGATATCACACCTTTGCATTT 2658
|| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 2692 TAGAAACTTCATCTTCTTGCCTAGTATCGCTGGACCTGGCGATATCACACCTTTGCATTT 2751
Query 2659 GGCTGCTTCCACATCTGGTTCTGATGATATGATTGATGTACTGACTAATGATCCACAAGA 2718
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2752 GGCTGCTTCCACATCTAGTTCTGATGATATGATTGATGCCCTGACTAATGATCCACAAGA 2811
Query 2719 GATTGGATTATCTTGTTGGAATACCCTAGTTGATGCATCCGGGCAGACTCCATTTAGGTA 2778
||||||||||||||| |||||||||||||| |||||| ||||||| ||||| ||||| ||
Sbjct 2812 GATTGGATTATCTTGCTGGAATACCCTAGTCGATGCAACCGGGCAAACTCCCTTTAGCTA 2871
Query 2779 TGCTGCAATGAGAAACAACCACAGTTACAACACCTTGGTGGGTCGTAAACTTGCAGATAA 2838
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2872 CGCTGCAATGAGAGACAACCACAGTTACAACACCTTGGTGGCTCGTAAACTTGCAGATAA 2931
Query 2839 AAGAAACGGGCAAATATCTCTGAACATTGAAAATGGGATCGATCAGATTGGTCTGAGTAA 2898
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2932 AAGAAACGGTCAAATATCTCTGAACATTGAAAATGGGATCGATCAGATTGGCCTGAGTAA 2991
Query 2899 GAGACTAAGCTCAGAGCTAAAGAGATCTTGCAACACATGTGCAAGTGTGGCTCTAAAGTA 2958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2992 GAGACTAAGCTCAGAGCTAAAGAGATCTTGCAACACATGTGCAAGTGTGGCTCTAAAGTA 3051
Query 2959 TCAGAAGAAGGTTTCGAGTTCACGTCGTTTGTTCCCAACTCCGATCATCCACTCGATGCT 3018
||||| |||||||||| |||||||||| |||||||||||||||||||| |||||||||||
Sbjct 3052 TCAGAGGAAGGTTTCGGGTTCACGTCGATTGTTCCCAACTCCGATCATTCACTCGATGCT 3111
Query 3019 TGCTGTTGCGACAGTCTGCGTTTGCGTCTGCGTGTTTATGCATGCTTTCCCAATCGTCAG 3078
||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct 3112 TGCGGTTGCGACAGTATGTGTTTGCGTCTGCGTGTTTATGCATGCTTTCCCAATGGTCAG 3171
Query 3079 ACAAGGCTCTCACTTCAGTTGGGGTGGTCTTGATTACGGTTCAATCTAAGGTTTGCTATA 3138
|||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||
Sbjct 3172 ACAAGGCTCTCACTTCAGTTGGGGTGGTCTTGATTATGGCTCAATCTAAGGTTTGTTATA 3231
Query 3139 TAACTAAGT 3147
|||||||||
Sbjct 3232 TAACTAAGT 3240
> AT1G20980.1 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa
promoter binding protein-like 14 | chr1:7324588-7329385 FORWARD
LENGTH=4014
Length=4014
Score = 2100 bits (1137), Expect = 0.0
Identities = 2296/2835 (81%), Gaps = 161/2835 (6%)
Strand=Plus/Plus
Query 386 GGAGGAAACTATCCAAAGTGTCAGGTTGATAATTGTAAGGAAGATTTATC-AATTGCTAA 444
||||| || ||||| | |||||||||||||||||||| |||||||| || | ||||||
Sbjct 794 GGAGGGAATTATCCCATGTGTCAGGTTGATAATTGTACTGAAGATTTGTCTCA-TGCTAA 852
Query 445 GGATTATCATAGAAGACATAAAGTATGTGAGGTTCATAGCAAAGCTACTAAAGCTCTTGT 504
||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 853 GGATTATCATAGAAGGCATAAAGTTTGTGAAGTTCATAGTAAAGCTACTAAAGCTCTTGT 912
Query 505 TGGGAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTT 564
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 913 TGGTAAACAGATGCAGAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAGTT 972
Query 565 TGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGATGGCCATAA-CAGGCGGAGGA-GA 622
||||||||||||||||||||||||||||||||||| ||||||||| | | ||||||| ||
Sbjct 973 TGATGAGGGGAAGAGAAGTTGTAGGCGTAGATTGGCTGGCCATAATC-GACGGAGGAGGA 1031
Query 623 AAA--ACGCTGCCCGATGTGATTACGTCTCAGGTTGTAGCTCTC-GAGAATCGTGATAAT 679
||| |||| ||| || | | || | ||| |||||| | || | | ||| | ||||| |
Sbjct 1032 AAACTACGCAGCCGGAGGAGGTTGCATCTGGGGTTGTGGTTC-CGGGGAACCATGATACT 1090
Query 680 ACT-TC--TA---ATAACGCTAATATGGATGTTATGGCTTTGTTAACGGCTTTAGTTTGT 733
||| | || |||||| ||||||||| |||||||||||||||| || |||| ||||
Sbjct 1091 ACTAACAATACGGCTAACGCCAATATGGATCTTATGGCTTTGTTAACCGCCTTAGCTTGT 1150
Query 734 GCACAAGGTAAGAACGAGGCT--A-TTACTAATGGG-TCTCCGGGAGTGCCTGATAGAGA 789
|||||||||||||| | || | | | | |||| ||||| | ||||||||||||||
Sbjct 1151 GCACAAGGTAAGAATGCGG-TAAAGCCCCCAGTGGGATCTCCAGCTGTGCCTGATAGAGA 1209
Query 790 GCAGCTTCTTCAGATACTTAACAAGATCAAGGCTTTACCTTTGCCTATGGATCTTGCCTC 849
||||||||||||||||||||||||||| || || || ||||||||||||||||||| |||
Sbjct 1210 GCAGCTTCTTCAGATACTTAACAAGATAAATGCATTGCCTTTGCCTATGGATCTTGTCTC 1269
Query 850 AAAGTTGAACAATATCGGAATTTTAGCCAGGGAAAATCCGGATCAACCTTCCGCGATGAA 909
|||||||||||||| |||| |||||||||| ||||| |||||| || | | | ||||
Sbjct 1270 TAAGTTGAACAATATTGGAAGTTTAGCCAGGAAAAATATGGATCACCCGAC-G-G-TGAA 1326
Query 910 CCCTCAAAAT-AGTATGAATGGAGCTTCTTCTCCATCTACCATGGACTTACTTGCTGCTC 968
||| |||||| | ||||||||| |||||| || |||||||||||||| ||||||| ||
Sbjct 1327 CCCACAAAATGA-TATGAATGGGGCTTCTCCT---TCTACCATGGACTTGCTTGCTGTTC 1382
Query 969 TCTCGGCAACTTTAGGTTCATCTGCTCCCGAGGC-CATAGCTTTTTTATCTCAAGGAGGG 1027
| ||| | || |||||||||||| | || || || | |||| | ||||||||||| |||
Sbjct 1383 TTTCGACGACATTAGGTTCATCTTCACCTGATGCAC-TAGCGATATTATCTCAAGGTGGG 1441
Query 1028 TTTGGTAACAAAGAAAACAATGATAGTACTAAGTTAACTTCTTCTGACCACGGCGTTACA 1087
|||||||||||||| | | | || || ||||||||| | |||| ||| | || ||||||
Sbjct 1442 TTTGGTAACAAAGACAGCGA-GA-AG-ACTAAGTTATCGTCTTATGAAAATGGTGTTACA 1498
Query 1088 ACCAA-TGTAGAAAAGAGAACTTT-GGAGTTTCCTTCTTTTGGGAGAGGAGAGAGGA-CA 1144
||||| | | |||||||||||||| || |||| ||||| ||||| | | |||||||| ||
Sbjct 1499 ACCAACT-TGGAAAAGAGAACTTTTGG-GTTTTCTTCTGTTGGG-G-G-AGAGAGGAGCA 1553
Query 1145 AGTAGCAGTAAACATTCTCCTTCTCAGGATTCAGATTCACGCGGTCAGGACACGAGATCT 1204
|||||||||| || ||||||||||||||||| || ||||| ||||| ||||| || |||
Sbjct 1554 -GTAGCAGTAACCAATCTCCTTCTCAGGATTCTGACTCACGTGGTCAAGACACTAGGTCT 1612
Query 1205 AGCTTATCTTTACAACTATTCACCTCTTCACCAGAGGATGAGAGTCAACCAACAGTTGCA 1264
||||| ||| |||||||||||||||| ||||| ||||||||||||| ||| ||||| |||
Sbjct 1613 AGCTTGTCTCTACAACTATTCACCTCATCACCCGAGGATGAGAGTCGACCGACAGTAGCA 1672
Query 1265 TCTTCAACAAAGTATTATTCTTCTGCGAGCAGTAACCCTGTTGAGGATAGATCTCCATCA 1324
||||| | |||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct 1673 TCTTCTAGAAAGTATTATTCTTCTGCCAGCAGTAATCCTGTGGAGGATAGATCACCATCT 1732
Query 1325 TCGTCTCCGGTCGTGCAAGAGTTGTTCCCTTTGCATACTTCTCCTGGAACCAGGAGGTCT 1384
|| ||||||||| |||| ||||| ||||| ||||| | || |||| ||||| ||||||
Sbjct 1733 TCTTCTCCGGTCATGCAGGAGTTATTCCCCTTGCAGGCATCCCCTGAAACCATGAGGTCC 1792
Query 1385 AACAATTACAAAAACACTAGTCCCATCCCCAGGACCAGTTGTTTGCCCCTAGAGCTCTTT 1444
|| ||| | |||||| | ||||||| |||| |||| |||||||| |||||||||
Sbjct 1793 AAGAATCATAAAAACTCAAGTCCCA------GGACTGGTTGCTTGCCCCTTGAGCTCTTT 1846
Query 1445 GGTGCATCAAACAGAGGAGCTACTGCAAATCCTAA-TTCCAATGTTTCTAGGCATCAATC 1503
|||||||| || ||||||||| ||| ||||||| || || ||||| |||| || ||
Sbjct 1847 GGTGCATCGAATAGAGGAGCT---GCAGATCCTAACTTTAAAGGTTTCG-GGCAACAGTC 1902
Query 1504 TGGTTATGCTTCATCTGGTTCGGATTATTCTCCTCCTAGCTTAAACTCTGATGCTCAGGA 1563
|||||||||||| ||||| || || || ||||||||||||||||||||||||||||||||
Sbjct 1903 TGGTTATGCTTCTTCTGGCTCTGACTACTCTCCTCCTAGCTTAAACTCTGATGCTCAGGA 1962
Query 1564 CCGCACCGGAAAGATCA-T-TTTCAAACTATTTGAAAAAGATCCTAGTCAGCTCCCTGGC 1621
|||||| |||||||| | | ||| |||||| |||| |||||||| ||||||||||||||
Sbjct 1963 CCGCACTGGAAAGAT-AGTCTTT-AAACTACTTGATAAAGATCCAAGTCAGCTCCCTGGG 2020
Query 1622 ACAT-TGCGAACCGAGATTTATAGA-TGGCTTTCTAGCTTTCCATCAGAAATGGAGAGTT 1679
|| | | ||| | ||||| |||| | |||||||| | | |||||||||||||||||||||
Sbjct 2021 AC-TCTACGATCTGAGATCTATA-ACTGGCTTTCGAACATTCCATCAGAAATGGAGAGTT 2078
Query 1680 ATATCAGGCCTGGTTGTGTTAT-CTTATCTGTCTATGTGGCAATGTCAGCTTCTGCTTGG 1738
||||||||||||| |||||| | || |||||| ||||| ||||||||| || | || |||
Sbjct 2079 ATATCAGGCCTGGCTGTGTTGTTCT-ATCTGTTTATGTAGCAATGTCACCTGCAGCCTGG 2137
Query 1739 GAACAACTCGAGGAAAATTTACTGCAACGGGTTAGT-TCTTTGGTTCAAGATTCA----- 1792
|||||||| ||| |||| || ||||||||| || || | |||| | ||| ||||
Sbjct 2138 GAACAACTTGAGCAAAAATTGCTGCAACGGCTTGGTGT-TTTGCTACAAAATTCTCCTTC 2196
Query 1793 -GATTTTTGGAGGAATACAAGATTTTTGGTCAATACAGGCAGACAGCTCGCATCACACAA 1851
||||||||||| || |||||||| | || || || || ||||| ||||||||||||||
Sbjct 2197 TGATTTTTGGAGAAACGCAAGATTTATAGTTAACACGGGAAGACAACTCGCATCACACAA 2256
Query 1852 ACACGGTAGAA-TTCG-TCTGAGCAAATCTTGGAGAACTTTGAATTCACCAGAACTGATC 1909
| | |||| || |||| | | ||||||||||||||||||| |||||||||||| || |||
Sbjct 2257 AAATGGTA-AAGTTCGATGT-AGCAAATCTTGGAGAACTTGGAATTCACCAGAGCTCATC 2314
Query 1910 ACGGTGTCGCC-GTTGGCTGTTGTAGCCGGTGAAGAAACA-GCTTTGATAGTAAGGGGTA 1967
| ||||| || || | |||| ||||| |||||||||||| | |||| | ||||| ||||
Sbjct 2315 TCAGTGTCACCTGTAG-CTGTGGTAGCTGGTGAAGAAACAAG-TTTGGTTGTAAGAGGTA 2372
Query 1968 GAAACTTGACCAATGACGGAATTAG-ACTTCGTTGCGCACATATGGGTAACTACACGTCA 2026
||| |||||| ||||| ||||| || | |||||||| |||||||||||| ||||| | ||
Sbjct 2373 GAAGCTTGACGAATGATGGAATCAGTA-TTCGTTGCACACATATGGGTAGCTACATGGCA 2431
Query 2027 ATAGAGGTAACT-GGAACAGAACATAGGCGAACAAAATTTGATGAGTTAAACGTTAGTAG 2085
|| |||||||| || ||| ||| | ||| | |||||| ||||| || || | |||
Sbjct 2432 ATGGAGGTAACCAGGG-CAGTGTGTAGACAAACCATATTTGACGAGTTGAATGTAAATAG 2490
Query 2086 TTTCAAAGTCCAGAGTGCA-AGCCCTG-TTTCTCTAGGACGCTGTTTCATTGAGGTGGAG 2143
|||||||||||| | || | | ||||| ||| ||| ||||||||||||||||||||||||
Sbjct 2491 TTTCAAAGTCCAAAATGTACA-CCCTGGTTT-TCTTGGACGCTGTTTCATTGAGGTGGAG 2548
Query 2144 AATGGATTCAGAGGTGACAATTTCCCTTTGATAATAGCCAATGCCA-CGATTTGCAAAGA 2202
||||||||||| ||||||| ||| || |||||||| |||||||| | | || ||||||||
Sbjct 2549 AATGGATTCAGGGGTGACAGTTTTCCATTGATAATTGCCAATGC-ATCCATCTGCAAAGA 2607
Query 2203 GTTGAATTGCCTTGAAGACGAGTTTCATCC-AAAAGACGTGATA-GAG-GAACAG-A--C 2256
||||||| | || | ||| |||||||| || ||||| | |||| || ||| || | |
Sbjct 2608 GTTGAATCGTCTCGGAGAAGAGTTTCACCCCAAAAGTCAAGATATGACAGAAGAGCAAGC 2667
Query 2257 ACAGAACTTAGATCGT---CCAAGATCAAGAGAAGAAGTTATT-TGCTTCTTGAATGAGC 2312
|||| || | ||||| || | |||||||||||||||| || ||||||||||| ||||
Sbjct 2668 GCAGAGCTCAAATCGTGGTCCCACATCAAGAGAAGAAGTT-TTGTGCTTCTTGAACGAGC 2726
Query 2313 TCGGTTGGCTATTTC-AGAGGAAATG-GACATCCGATATTCATGGAG-AATCTGACTTTT 2369
| |||||||| |||| ||| ||| | ||| || || ||| ||| ||||||||||||
Sbjct 2727 TTGGTTGGCT-TTTCCAGAAGAA-TCAGACCTCTGAGCTTCG-GGAACAATCTGACTTTT 2783
Query 2370 CTCTTCCCCGCTTCAAATTTTTGCTTGTATGCTCTGTTGAAAGAGATTGCTGTTCTCTCA 2429
| ||| |||||||||| |||||||| || ||||| ||||||||||||| |||| ||||||
Sbjct 2784 CCCTTGCCCGCTTCAAGTTTTTGCTAGTTTGCTCAGTTGAAAGAGATTACTGTGCTCTCA 2843
Query 2430 TAAGAACTG-TCCTGGATATGATGGTAGAGAGAAATTTGG-GAAAAGATG-GTCTGATGA 2486
| ||||| | |||| || ||| | |||||||||||||||| ||| |||| | |||| |
Sbjct 2844 TCAGAAC-GCTCCTCGACATGTTAGTAGAGAGAAATTTGGTGAAT-GATGAG-CTGA--A 2898
Query 2487 ACA-AGGAGTCCTTAGATATGCTGGCTGAGACTCAGCTATTGAATCGCGCTGTCAAAAGG 2545
|| || || ||| |||||||| ||||||| |||| | |||||||| ||||| || |||
Sbjct 2899 -CAGAGAAGCCCTG-GATATGCTTGCTGAGATTCAGTTGTTGAATCGTGCTGTTAAGAGG 2956
Query 2546 AGAAAT-ACAAAAATGG-CTGAAACG-CTGATTCATTACTCCG-TTAATCCGT---C--T 2596
| ||| |||||||||| | ||| | || ||||||||| | | |||| || | | |
Sbjct 2957 A-AAAGCACAAAAATGGTC-GAA-CTACTCATTCATTAC-CTGGTTAACCCCTTGACACT 3012
Query 2597 -A---C-TA-A-AAACTTCATCTTCTTGCCTAATATCGCTGGACCTGGTGATATCACACC 2649
| | | | ||| ||| | ||||| |||||||| |||||||||| | |||||||||
Sbjct 3013 CAGTTCCTCCAGAAAGTTCGTTTTCTTACCTAATATAACTGGACCTGGCGGTATCACACC 3072
Query 2650 TTTGCATTTGGCTGCTTCCACATCTGGTTCTGATGATATGATTGATGTACTGACTAATGA 2709
||| ||| | ||||| | ||||||||||| ||||||||||||||| |||| || |||||
Sbjct 3073 TTTACATCTAGCTGCATGTACATCTGGTTCAGATGATATGATTGATCTACTCACCAATGA 3132
Query 2710 TCCACAAGAGATTGGATTATCTTGTTGGAATACCCTA-GTTGATGCATCCGGGCAGACTC 2768
||||||||||||||||||||| | ||||| || || | |||||| ||||||| ||||
Sbjct 3133 TCCACAAGAGATTGGATTATCGAGCTGGAACACTCTTCGC-GATGCAACCGGGCAAACTC 3191
Query 2769 CATTTAGGTATGCTGCAATGAGAAACAACCACAGTTACAACACCTTGGTGGGTCGTAAAC 2828
||| || || |||||||| || |||||||| | || ||| | ||||||| ||||||||
Sbjct 3192 CATACAGCTACGCTGCAATAAGGAACAACCATAACTATAACTCATTGGTGGCTCGTAAAC 3251
Query 2829 TTGCAGATAAAAGAAACGGGCAAATATCTCTGAACATTGAAAATG-GG-A-TCGATCAGA 2885
||||||| ||||||||| |||| | || || ||||| || | | || | | || || |
Sbjct 3252 TTGCAGACAAAAGAAACAAGCAAGTCTCACTAAACATCGAGCACGAGGTAGTTGACCAAA 3311
Query 2886 TTGGTCTGAGTAAGAGACTAAGCTCAGAGCT-AA-A-G--AG-ATC-T-T-GCAACACAT 2936
|||||||| |||||| |||| | |||| | || | | | ||| | | | | | |
Sbjct 3312 CCGGTCTGAGCAAGAGATTAAGTTTAGAGATGAACAAGTCATCATCATCTTGTGCCTCGT 3371
Query 2937 GTGCAA-GTGTGGCTCTAAAGTATCAGAAGAAG-GTTTCGAG-TTCACGTCGTTTGTTCC 2993
|||||| | |||||| | |||||||| ||| || ||||| || ||||| ||||||||||
Sbjct 3372 GTGCAACG-GTGGCTTTGAAGTATCA-AAGGAGAGTTTC-AGGTTCACAACGTTTGTTCC 3428
Query 2994 CAACTCCGATCATCCACTCGATGCTTGCTGTTGCGACAGTCTGCGTTTGCGTCTGCGTGT 3053
||||||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||| |
Sbjct 3429 CAACTCCTATCATTCACTCAATGCTTGCGGTTGCAACGGTCTGCGTTTGCGTCTGCGT-T 3487
Query 3054 TT-ATGCATGCTTTCCCAATCGTCAGACAAGGCTCTCACTTCAGTTGGGGTGGTCTTG-A 3111
|| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |
Sbjct 3488 TTCATGCATGCTTTCCCAATCGTCAGACAAGGGTCTCACTTCAGTTGGGGAGGT-TTGGA 3546
Query 3112 TTACGGTTCAATCTA 3126
||| || ||||||||
Sbjct 3547 TTATGGCTCAATCTA 3561
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156520862160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5