BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927337 Length=520 Score E Sequences producing significant alignments: (Bits) Value AT1G79200.1 | Symbols: | unknown protein; Has 30201 Blast hits... 774 0.0 > AT1G79200.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:29794387-29796040 FORWARD LENGTH=826 Length=826 Score = 774 bits (419), Expect = 0.0 Identities = 479/508 (94%), Gaps = 3/508 (1%) Strand=Plus/Plus Query 4 TAGTCCGTCGGGAAATAATGGGAAGCGAACGGAGCCCCAAGGAGAAGAAGAGAAGCAGAG 63 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 1 TAGTCCGTCGGGAAATAATGGTAAGCGAACGGAGCTCCAAGGAGAAGAAGAGAAGCAGAG 60 Query 64 CTCGGAGCGAAGATTCTTCATCTTCCGATTACGAAGGGAAAGTAAAGAGGCATCGAGGAA 123 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 61 CTCGGAGCGAAGATTCTTCATCTTCCGATTACGAAGAGAAAGTTAAGAGGCATCGAGGAA 120 Query 124 CAGAGAAAGATGATGAAAGGAGAAGTAGGAGAAGTGAGAAGAAGGATAAGAAATCTCACA 183 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 121 CAGAGAAAGATGATGAAAGGAGAAGTAGGAGAAGTGATAAGAAGGATAAGAAATCTCACA 180 Query 184 AGCACCACAAATCCAGTTCATCGAAGAAGTCAAAGGATGATAAGCC-AAAAAGGAAACAT 242 ||||||||||||||||| |||| |||||||| |||||||||||||| |||||| |||||| Sbjct 181 AGCACCACAAATCCAGTACATCAAAGAAGTCCAAGGATGATAAGCCGAAAAAG-AAACAT 239 Query 243 GCAGAAGGCGACCACAAGCTAAAAGAGGGGATTCCAGAGCTATCAATGGAGGACTACTTC 302 | ||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 240 ACGGAAAGCGACCACAAGCTAAAAGAGGGAATTCCAGAGCTATCAATGGAAGACTACTTC 299 Query 303 TCGAAGAACAACGAATTTGCTACATGGCTGAAAGAAGAAAAGCGTACTTACTTTAATGAT 362 ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 300 TCGAAAAACAACGAGTTTGCTACATGGCTGAAAGAAGAAAAACGTACTTACTTTAATGAT 359 Query 363 CTCACTACCGAAGCTGCACGAGAATTGTTCTCACGTTTTGTCAAGAGATGGAACAGAGGG 422 ||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||| Sbjct 360 CTCACGACCGAAGCTGCACGAGGACTGTTCTCACGATTTGTCAAGAGATGGAACAGAGGA 419 Query 423 AAACTCGAATCTCAATACTATGAGGGAATCTCCACTGCCCCACGAACAGCTCACAACTGG 482 |||||||| |||| |||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 420 AAACTCGAGTCTCGATACTACGAGGGAATCTCCACTGCCCCACGAACAGCTCACGACTGG 479 Query 483 ATGATCAAGCATAGGTGAAAAAA-GCAA 509 |||||||||| |||||||||||| |||| Sbjct 480 ATGATCAAGCGTAGGTGAAAAAAAGCAA 507 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24865902765 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5