BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927340
Length=1180
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79230.1 | Symbols: ST1, ATMST1, MST1, ATRDH1, STR1 | mercap... 1927 0.0
AT1G16460.2 | Symbols: ATRDH2, ATMST2, MST2, ST2, STR2, RDH2 | ... 835 0.0
> AT1G79230.1 | Symbols: ST1, ATMST1, MST1, ATRDH1, STR1 | mercaptopyruvate
sulfurtransferase 1 | chr1:29800693-29803939 FORWARD
LENGTH=1531
Length=1531
Score = 1927 bits (1043), Expect = 0.0
Identities = 1122/1161 (97%), Gaps = 2/1161 (0%)
Strand=Plus/Plus
Query 10 TTGAGGTGGATATGGCCTCGACCCTTTTCTCCAGAAGTTTCTTGGCTGCTAGTCACCGCA 69
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 121 TTGAGGTGGATATGGCCTCGACCCTTTTCTCCAGAACTTTCTTGGCTGCTAGTCACCG-A 179
Query 70 -TGATTGCTCCTTCTCTTCCACAAAAGATCTTTAATCCCGCCACCTTTCTCACTAGATCA 128
||||| ||||||||||||| ||||||||||||||||| ||||||||||||| ||| |||
Sbjct 180 CTGATTACTCCTTCTCTTCCGCAAAAGATCTTTAATCCAGCCACCTTTCTCAGTAGGTCA 239
Query 129 TTCTACTCTCAGCTAGGCACCGCTTCTACAGCCTATAAATCAACTACATGGGCTCGTCGA 188
|| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 240 CTCCACTCTCAGTTAGGCTCCGCTTCTACAGCCTATAAATCAACTACTTGGGCTCGTCGA 299
Query 189 GCCATGGCTTCTACTGGAGTTGAGACAAAAGCCGGTTACTCGACATCATCCATATCAACC 248
|| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 300 GCTATGGCTTCTACTGGAGTTGAGACAAAAGCCGGTTACTCCACATCATCCGTATCAACC 359
Query 249 AGTGAACCTGTTGTTTCTGTTGATTGGCTTCATGCTAATCTTAGAGAGCCTGATTTGAAG 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 AGTGAACCTGTTGTTTCTGTTGATTGGCTTCATGCTAATCTTAGAGAGCCTGATTTGAAG 419
Query 309 ATTTTGGATGCTTCATGGTACATGCCCGATGAGCAGAGAAATCCAATCCAAGAATATCAG 368
|||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct 420 ATTTTGGATGCTTCATGGTATATGCCGGATGAGCAGAGAAATCCGATCCAAGAATATCAG 479
Query 369 GTCGCTCATATTCCCCGCGCTCTCTTCTTTGATTTGGATGGAATATCAGATCGAAGAACT 428
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 480 GTTGCTCATATTCCCCGCGCTCTCTTCTTTGATTTGGATGGAATATCAGATCGAAAAACT 539
Query 429 AGTTTGCCACATATGTTACCCTCTGAGGAAGCTTTTGCTGCTGGTTGTTCTGCTCTTGGA 488
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 540 AGTTTGCCACATATGTTGCCCACTGAGGAAGCTTTTGCTGCTGGTTGTTCTGCTCTTGGA 599
Query 489 ATTGATAACAAAGATGAAGTGGTTGTCTATGATGGAAAGGGGATCTTTAGTGCAGCCCGT 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 ATTGATAACAAAGATGAAGTGGTTGTCTATGATGGAAAGGGGATCTTTAGTGCAGCCCGT 659
Query 549 GTATGGTGGATGTTCCGAGTTTTTGGACATGAAAAAATTTGGGTGCTCGATGGAGGGCTA 608
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 660 GTATGGTGGATGTTCCGAGTTTTTGGACATGAAAAAGTTTGGGTGCTCGATGGAGGTCTA 719
Query 609 CCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCATCAGGTGATGCTATTCTG 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 CCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCATCAGGTGATGCTATTCTG 779
Query 669 AAAGCCAGTGCCGCAAGTGAGGCTATAGAGAAAATTTATCAAGGACAAACCGTCAGTCCG 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 AAAGCCAGTGCCGCAAGTGAGGCTATAGAGAAAATTTATCAAGGACAAACCGTCAGTCCG 839
Query 729 ATAACCTTTCAGACAAAGTTCCAGCCACATCTAGTGTGGACACTTGATCAGGTCAAGAAC 788
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 ATAACCTTTCAGACTAAGTTCCAGCCACATCTAGTGTGGACACTTGATCAGGTCAAGAAC 899
Query 789 AATATGGAGGATCCGACTTATCAACACATAGACGCTCGTTCCAAAGCCAGGTTTGATGGT 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 AATATGGAGGATCCGACTTATCAACACATAGACGCTCGTTCCAAAGCCAGGTTTGATGGT 959
Query 849 ACTGCTCCAGAACCCCGTAAGGGAATAAGAAGCGGCCATATACCTGGAAGCAAATGTGTC 908
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 960 ACTGCTCCAGAACCCCGTAAGGGAATAAGAAGCGGTCATATACCTGGAAGCAAATGTATC 1019
Query 909 CCTTTTCCTCAGATGTTTGATTCTTGTAACACACTGTTACCAGCAGACGAGCTGAAGAAA 968
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 1020 CCTTTTCCTCAGATGTTTGATTCTTGTAACACATTGTTACCAGCAGAGGAGCTGAAGAAA 1079
Query 969 CGATTTGAACAAGAAGACATCTCACTGGACAAGCCTATTATGGCCTCGTGTGGGACTGGC 1028
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CGATTTGACCAAGAAGATATCTCACTGGACAAGCCTATTATGGCCTCGTGTGGGACTGGT 1139
Query 1029 GTAACAGCTTGCATCCTGGCAATGGGGCTTCACCGGCTGGGGAAAACCGACGTGCCGGTC 1088
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1140 GTAACAGCTTGCATCTTGGCAATGGGGCTTCACCGGCTGGGGAAAACCGACGTGCCGATC 1199
Query 1089 TATGATGGGTCGTGGACTGAATGGGCGACGCAACCAGACTTGCCCATAGAGGGTGAAGAA 1148
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct 1200 TATGATGGGTCGTGGACTGAATGGGCGACACAACCAGACTTGCCCATAGAGAGTGTTGAA 1259
Query 1149 TCTTCTTCATGAAAGTCTCCA 1169
|||||||||||||||||||||
Sbjct 1260 TCTTCTTCATGAAAGTCTCCA 1280
> AT1G16460.2 | Symbols: ATRDH2, ATMST2, MST2, ST2, STR2, RDH2
| rhodanese homologue 2 | chr1:5619641-5622624 REVERSE LENGTH=1379
Length=1379
Score = 835 bits (452), Expect = 0.0
Identities = 806/974 (83%), Gaps = 36/974 (4%)
Strand=Plus/Plus
Query 184 GTCGAGCCATGGCTTCTACTGGAGT-TGAGACAAAAGCCGGTTACTCGACATCATCCATA 242
|||||| |||||||||| ||||| | |||| ||||||| ||| || || | |||||
Sbjct 208 GTCGAGTCATGGCTTCTTCTGGA-TCTGAGGCAAAAGCTAATTA--CG-CA-C--CCATA 260
Query 243 TCAACCAGTGAACCTGTTGTTTCTGTTGATTGGCTTCA-TGCTAATCTTAGAGA-GCCTG 300
|| |||| |||||||||||| |||||||||||||| || | |||||||| |||| | |||
Sbjct 261 TCTACCAATGAACCTGTTGTGTCTGTTGATTGGCTCCACT-CTAATCTTGGAGATG-CTG 318
Query 301 ATTTGAAGATTTTGGATGCTTCATGGTACAT-GCCCGATGAGCAGAGAAATCCAATCCAA 359
|| | ||| |||||||||| ||||||||||| || | ||||||| |||||||||||||||
Sbjct 319 ATATAAAGGTTTTGGATGCCTCATGGTACATGGCAC-ATGAGCAAAGAAATCCAATCCAA 377
Query 360 GAATATCAGGTCGCTCATATTCCCCGCGCTCTCTTCTTTGATTTGGATGGAATATCAGAT 419
|| ||||| || ||||||||||| | |||||||||||||||||| |||||||| |||||
Sbjct 378 GAGTATCAAGTTGCTCATATTCCAGGTGCTCTCTTCTTTGATTTGAATGGAATAGCAGAT 437
Query 420 CGAAGAACTAGTTTGCCACATATGTTACCCTCTGAGGAAGCTTTTGCTGCTGGTTGTTCT 479
|||| ||| | ||| | ||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct 438 CGAAAAACAAATTTACGACACATGCTACCATCTGAGGAAGCTTTTGCTGCTGGTTGTTCT 497
Query 480 GCTCTTGGAATTGATAACAAAGATGAAGTGGTTGTCTATGATGGAAAGGGGATCTTTAGT 539
||||||||||| || ||||| |||| ||||||||| |||||||||| |||| ||||||||
Sbjct 498 GCTCTTGGAATCGAGAACAACGATGGAGTGGTTGTGTATGATGGAATGGGGCTCTTTAGT 557
Query 540 GCAGCCCGTGTATGGTGGATGTTCCGAGTTTTTGGACATGAAAAAATTTGGGTGCTCGAT 599
||||| ||||||||||||||||| |||| ||||||||||| ||| | ||||| || |||
Sbjct 558 GCAGCTCGTGTATGGTGGATGTTTAGAGTCTTTGGACATGACAAAGTATGGGTACTTGAT 617
Query 600 GGAGGGCTA-CC-AAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCATCAGGTG 657
||||| || || || ||||||||| ||||| ||||| |||||||| |||| ||| ||
Sbjct 618 GGAGG-CTTGCCGAA-ATGGCGTGCTTCAGGCTATGACGTTGAATCCAGTGTTTCAAATG 675
Query 658 ATGCTATTCTGAAAGCCAGTGCCGCAAGTGAGGCTATAGAGAAAATTTATCAAGGACAAA 717
|||| ||| ||||||||||||| |||| ||||||||||||||| || |||||||||||||
Sbjct 676 ATGCCATTTTGAAAGCCAGTGCAGCAACTGAGGCTATAGAGAAGATCTATCAAGGACAAA 735
Query 718 CCGTCAGTCCGATAACCTTTCAGACAAAGTTCCAGCCACATCTAGTGT-GGACACTTGAT 776
| | || || ||||| |||||||| ||||||| ||||||||| || | || ||||||||
Sbjct 736 CAATTAGCCCAATAACTTTTCAGACGAAGTTCCGGCCACATCTTGTATTGG-CACTTGAT 794
Query 777 CAGGTCAAG-AACAATATGGAGGATCCGACTTATCAACACATAGACGCTCGTTCCAAAGC 835
||||| ||| || || || |||||| ||||||||| ||||| || || ||||| ||||
Sbjct 795 CAGGTGAAGGAA-AACATCGAGGATAAGACTTATCAGCACATCGATGCGCGTTC-AAAGG 852
Query 836 C-AGGTTTGATGGTACTGCTCCAGAACCCCGTAAGGGAATAA-GAAGCGGCCATATACCT 893
| || ||||| |||| |||||||||||| | ||||| || || | || ||||||||
Sbjct 853 CTAGATTTGACGGTATTGCTCCAGAACCTTGGAAGGGTTTACCGA-GTGGTCATATACCC 911
Query 894 GGAAGCAAATGTGTCCCTTTTCCTC-AGATGTTTGATTCTTGT-AACACACTGTTACCAG 951
|| ||||| |||||||||||||| | | ||||||||||| | | || |||||||||||||
Sbjct 912 GGTAGCAAGTGTGTCCCTTTTCCCCTA-ATGTTTGATTCCTCTCAA-ACACTGTTACCAG 969
Query 952 CAGACGAGCTGAAGAAAC-GATTTGAACAAGAAGACATCTCACTGGACAAG-CCTATTAT 1009
|||| ||||||||||| | | |||||||| |||||||| || ||||||| | || |||
Sbjct 970 CAGAGGAGCTGAAGAAGCAG-TTTGAACAGGAAGACATATCTCTGGACA-GTCCGATTGC 1027
Query 1010 GGCCTCGTGTGGGACTGGCGTAACAGCTTGCATCCTGGCAATGGGGCTTCACCGGCTGGG 1069
|||||| ||||| || || ||||||||||| || ||||| |||| ||| | || |||||
Sbjct 1028 GGCCTCATGTGGAACCGGTGTAACAGCTTGTATTTTGGCATTGGGACTTTATCGTCTGGG 1087
Query 1070 GAAAACCGACGTGCCGGTCTATGATGGGTCGTGGACTGAATGGGCGAC-GCAACCAGACT 1128
||||| | ||| | ||||||||||||| |||||||||||||| || ||| ||| |||
Sbjct 1088 AAAAACTAATGTGGCAATCTATGATGGGTCTTGGACTGAATGGGCAACTGCA-CCAAACT 1146
Query 1129 TGCCCATAGAGGGT 1142
||||||||| ||||
Sbjct 1147 TGCCCATAGTGGGT 1160
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57931428930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5