BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927399
Length=1511
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79720.1 | Symbols: | Eukaryotic aspartyl protease family p... 2200 0.0
AT1G79710.1 | Symbols: | Major facilitator superfamily protein... 1214 0.0
> AT1G79720.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr1:29997127-29999045 REVERSE LENGTH=1681
Length=1681
Score = 2200 bits (1191), Expect = 0.0
Identities = 1387/1479 (94%), Gaps = 23/1479 (2%)
Strand=Plus/Plus
Query 47 CATTAAATCTTTCACTAGCTCCTTTGCTTCTTGTTCTTATTTTCCTTCTCTTGTGTGTTG 106
|||| ||||||||||| ||||||||||| |||||| || |||||||||||| ||||||||
Sbjct 111 CATTGAATCTTTCACTTGCTCCTTTGCTACTTGTTTTTCTTTTCCTTCTCTCGTGTGTTG 170
Query 107 TTCATGGCGTCGACGAGAAGAAGATTCTCAGTGTACACAACAACATCTGGTCTCCCAAGA 166
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 171 TTCATGGCGTCGATGAGAAGAAGATTCTCAGTGTACATAACAACATCTGGTCTCCCAAGA 230
Query 167 AATCGTATGAAGCTTCGAGTTCATGTTTCTCTCGAAGTCTTGGAAAAGGAAGAGATTCCA 226
|||| || |||||||| | ||||||||| ||||| |||||||||||||||||||| ||||
Sbjct 231 AATCATACGAAGCTTCAACTTCATGTTTTTCTCGCAGTCTTGGAAAAGGAAGAGAATCCA 290
Query 227 CTACATTAGAGATGAAACATAGAGAACTTTGCTCAGGAAAGACTATAGATTGGGGTAAGA 286
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 291 CTACATTGGAGATGAAACATAGAGAACTTTGCTCAGGAAAGACTATAGATTTGGGTAAGA 350
Query 287 AGATGAGAAGAGCCTT-GCTTCTT-GATAACATTCGAGTTCAGTCACTTCAACTCAGAAT 344
|||||||||||||||| | || || ||||||||||||||||||||||||||||||| |||
Sbjct 351 AGATGAGAAGAGCCTTAG-TT-TTGGATAACATTCGAGTTCAGTCACTTCAACTCAAAAT 408
Query 345 CAAAGCAATGACCTCAAGCACCACTGAACAATCTCTTTCCGAAACTCAGATTCCGTTAAC 404
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 409 CAAAGCAATGACCTCAAGCACCACTGAACAATCTGTTTCCGAAACTCAGATTCCGTTAAC 468
Query 405 CTCAGGGATAAAACTTGAGACTTTGAACTACATCGTTACAGTTGAATTAGGAGGGAAAAA 464
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 469 CTCAGGGATAAAACTTGAGTCTTTGAACTACATCGTTACAGTTGAATTAGGAGGGAAAAA 528
Query 465 CATGAGTTTGATCGTTGACACTGGAAGTGACTTGACTTGGGTCCAGTGCCAGCCTTGCAG 524
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 529 CATGAGTTTGATCGTTGACACTGGAAGTGACCTGACTTGGGTCCAATGCCAGCCTTGCAG 588
Query 525 ATCCTGTTACAACCAACAAGGTCCTTTGTATGACCCATCAGTCTCTTCTTCTTACAAGAC 584
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 589 ATCCTGTTACAACCAACAAGGTCCTTTGTATGACCCATCAGTCTCATCTTCTTACAAGAC 648
Query 585 AGTGTTCTGTAACTCATCCACTTGTCAGGACCTTGTAGCAGCTACCGGCAATTCAGGCCC 644
||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||
Sbjct 649 GGTGTTCTGTAACTCATCCACTTGTCAGGACCTTGTGGCAGCTACCAGCAATTCCGGCCC 708
Query 645 TTGTGGAGG-ATTCAATGGTGTTGTAAAGACAACTTGTGAGTACGTTGTCAGCTATGGAG 703
||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 709 TTGTGGAGGTAA-CAATGGTGTTGTAAAGACACCTTGTGAGTACGTTGTCAGCTATGGAG 767
Query 704 ATGGATCATACACTCGAGGAGACTTGGCCAGTGAAAGCATCATATTAGGCGACACAAAAC 763
|||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||
Sbjct 768 ATGGATCATACACTCGAGGAGACTTGGCAAGTGAAAGCATCCTATTGGGCGACACAAAAC 827
Query 764 TCGAAAATCTT-GTCTTTGGTTGTGGCCGAAACAATAAAGGTCTGTTTGGGGGAGCCTCT 822
| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 828 TTGAAAA-CTTTGTCTTTGGTTGTGGCCGAAACAACAAAGGTCTGTTTGGGGGATCCTCT 886
Query 823 GGTCTAATGGGTTTGGGCAGAAGCTCAGTTTCTTTAGTCTCCCAGACTTTGAAAACTTTC 882
||| ||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||
Sbjct 887 GGTTTAATGGGTTTGGGAAGAAGTTCAGTCTCTTTAGTCTCCCAAACTTTGAAAACTTTC 946
Query 883 AACGGAGTGTTCTCATACTGTCTACCTTCTCTTGAGGATGGAGCTTCTGG-TACATTGTC 941
|||||||| |||||||||||| |||||||||||||||||||||||||||| | |||||||
Sbjct 947 AACGGAGTTTTCTCATACTGTTTACCTTCTCTTGAGGATGGAGCTTCTGGCT-CATTGTC 1005
Query 942 -TTTCGGTAATGATTTTTCTGTTTACAAGAATTCAACTTCAGTTTCCTACACGCCGCTAG 1000
||| ||||| |||| |||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1006 CTTT-GGTAACGATTCCTCTGTTTACACGAATTCAACTTCAGTTTCCTACACGCCGTTAG 1064
Query 1001 TACAAAACCCTCAGCTTCGTTCCTTTTACATTCTGAATCTCACTGGTGCTAGCATTGGTG 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 TACAAAACCCTCAGCTTCGTTCCTTTTACATTCTGAATCTCACTGGTGCTAGCATTGGTG 1124
Query 1061 GCATGGAGCTGAAAACTTTAAGCTTTGGTAGAGGGATTCTAATCGATTCAGGAACGGTCA 1120
|| |||| |||||| ||| ||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1125 GCGTGGAACTGAAATCTTCAAGCTTTGGCAGAGGGATTCTAATCGATTCAGGAACGGTTA 1184
Query 1121 TCACGAGATTGCCACCTTCCATTTACAAAGCGGTGAAGACAGAGTTTCTGAAACAGTTTT 1180
|||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 1185 TCACAAGATTGCCACCTTCCATTTACAAAGCTGTGAAGATAGAGTTTCTGAAACAGTTTT 1244
Query 1181 CCGGGTTTCCTTCAACTCCTGGCTATTCAATCTTAGACACTTGCTTTAACCTCACAAGTT 1240
||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1245 CCGGGTTTCCTACTGCTCCTGGTTATTCAATCTTAGACACTTGCTTTAACCTCACAAGTT 1304
Query 1241 ATGAAGACATTAGCATTCCCACTATCAAAATGATCTTCGAAGGTAACGCTGAGCTCGAAG 1300
|||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 1305 ATGAAGACATAAGCATTCCCATTATCAAAATGATCTTCCAAGGTAACGCTGAGCTCGAAG 1364
Query 1301 TTGATGTCACCGGTGTGTTCTACTTTGTCAAGCCTGATGCATCTCTAGTCTGTTTGGCCT 1360
| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1365 TGGATGTCACTGGTGTGTTCTACTTTGTCAAGCCTGACGCATCTCTAGTCTGCTTGGCCT 1424
Query 1361 TGGCAAGTCTGTCATATGAAAATGAAGTCGGGATCATCGGAAATTACCAGCAGAAAAACC 1420
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1425 TAGCAAGTCTGTCATATGAAAATGAAGTCGGGATCATCGGAAATTATCAGCAGAAAAACC 1484
Query 1421 AGAGAGTAATATATGATACCACACAAGAGAGGCTAGGAATTG-CAGGAGAAAACTGCA-- 1477
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 1485 AGAGAGTAATATATGATACCACACAAGAGAGGCTAGGAATTGTC-GGAGAAAACTGCAGA 1543
Query 1478 -T--G---CCTACACCATAACTTAATATCC-TTTGTGTG 1509
| | |||||||||||||||||||||| ||||||||
Sbjct 1544 GTCTGATGCCTACACCATAACTTAATATCCATTTGTGTG 1582
> AT1G79710.1 | Symbols: | Major facilitator superfamily protein
| chr1:29995116-29998058 FORWARD LENGTH=2585
Length=2585
Score = 1214 bits (657), Expect = 0.0
Identities = 780/837 (93%), Gaps = 17/837 (2%)
Strand=Plus/Minus
Query 686 ACGTTGTCAGCTATGGAGATGGATCATACACTCGAGGAGACTTGGCCAGTGAAAGCATCA 745
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2585 ACGTTGTCAGCTATGGAGATGGATCATACACTCGAGGAGACTTGGCAAGTGAAAGCATCC 2526
Query 746 TATTAGGCGACACAAAACTCGAAAATC-TTGTCTTTGGTTGTGGCCGAAACAATAAAGGT 804
|||| |||||||||||||| ||||| | ||||||||||||||||||||||||| ||||||
Sbjct 2525 TATTGGGCGACACAAAACTTGAAAA-CTTTGTCTTTGGTTGTGGCCGAAACAACAAAGGT 2467
Query 805 CTGTTTGGGGGAGCCTCTGGTCTAATGGGTTTGGGCAGAAGCTCAGTTTCTTTAGTCTCC 864
|||||||||||| |||||||| ||||||||||||| ||||| ||||| ||||||||||||
Sbjct 2466 CTGTTTGGGGGATCCTCTGGTTTAATGGGTTTGGGAAGAAGTTCAGTCTCTTTAGTCTCC 2407
Query 865 CAGACTTTGAAAACTTTCAACGGAGTGTTCTCATACTGTCTACCTTCTCTTGAGGATGGA 924
|| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 2406 CAAACTTTGAAAACTTTCAACGGAGTTTTCTCATACTGTTTACCTTCTCTTGAGGATGGA 2347
Query 925 GCTTCTGG-TACATTGT-CTTTCGGTAATGATTTTTCTGTTTACAAGAATTCAACTTCAG 982
|||||||| | |||||| |||| ||||| |||| |||||||||| ||||||||||||||
Sbjct 2346 GCTTCTGGCT-CATTGTCCTTT-GGTAACGATTCCTCTGTTTACACGAATTCAACTTCAG 2289
Query 983 TTTCCTACACGCCGCTAGTACAAAACCCTCAGCTTCGTTCCTTTTACATTCTGAATCTCA 1042
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2288 TTTCCTACACGCCGTTAGTACAAAACCCTCAGCTTCGTTCCTTTTACATTCTGAATCTCA 2229
Query 1043 CTGGTGCTAGCATTGGTGGCATGGAGCTGAAAACTTTAAGCTTTGGTAGAGGGATTCTAA 1102
|||||||||||||||||||| |||| |||||| ||| ||||||||| |||||||||||||
Sbjct 2228 CTGGTGCTAGCATTGGTGGCGTGGAACTGAAATCTTCAAGCTTTGGCAGAGGGATTCTAA 2169
Query 1103 TCGATTCAGGAACGGTCATCACGAGATTGCCACCTTCCATTTACAAAGCGGTGAAGACAG 1162
|||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||
Sbjct 2168 TCGATTCAGGAACGGTTATCACAAGATTGCCACCTTCCATTTACAAAGCTGTGAAGATAG 2109
Query 1163 AGTTTCTGAAACAGTTTTCCGGGTTTCCTTCAACTCCTGGCTATTCAATCTTAGACACTT 1222
||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||
Sbjct 2108 AGTTTCTGAAACAGTTTTCCGGGTTTCCTACTGCTCCTGGTTATTCAATCTTAGACACTT 2049
Query 1223 GCTTTAACCTCACAAGTTATGAAGACATTAGCATTCCCACTATCAAAATGATCTTCGAAG 1282
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||
Sbjct 2048 GCTTTAACCTCACAAGTTATGAAGACATAAGCATTCCCATTATCAAAATGATCTTCCAAG 1989
Query 1283 GTAACGCTGAGCTCGAAGTTGATGTCACCGGTGTGTTCTACTTTGTCAAGCCTGATGCAT 1342
||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 1988 GTAACGCTGAGCTCGAAGTGGATGTCACTGGTGTGTTCTACTTTGTCAAGCCTGACGCAT 1929
Query 1343 CTCTAGTCTGTTTGGCCTTGGCAAGTCTGTCATATGAAAATGAAGTCGGGATCATCGGAA 1402
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1928 CTCTAGTCTGCTTGGCCTTAGCAAGTCTGTCATATGAAAATGAAGTCGGGATCATCGGAA 1869
Query 1403 ATTACCAGCAGAAAAACCAGAGAGTAATATATGATACCACACAAGAGAGGCTAGGAATTG 1462
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1868 ATTATCAGCAGAAAAACCAGAGAGTAATATATGATACCACACAAGAGAGGCTAGGAATTG 1809
Query 1463 -CAGGAGAAAACTGCA---T--G---CCTACACCATAACTTAATATCC-TTTGTGTG 1509
| ||||||||||||| | | |||||||||||||||||||||| ||||||||
Sbjct 1808 TC-GGAGAAAACTGCAGAGTCTGATGCCTACACCATAACTTAATATCCATTTGTGTG 1753
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74547809325
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5