BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927405
Length=1373
Score E
Sequences producing significant alignments: (Bits) Value
AT1G80900.1 | Symbols: ATMGT1, MGT1, MRS2-10 | magnesium transp... 2298 0.0
AT1G16010.2 | Symbols: MGT2, MRS2-1 | magnesium transporter 2 |... 1363 0.0
> AT1G80900.1 | Symbols: ATMGT1, MGT1, MRS2-10 | magnesium transporter
1 | chr1:30398150-30400340 REVERSE LENGTH=1614
Length=1614
Score = 2298 bits (1244), Expect = 0.0
Identities = 1332/1375 (97%), Gaps = 4/1375 (0%)
Strand=Plus/Plus
Query 1 GTATCTGGAGATTGCCAACAATGTCTGAACTCAAAGAGCGTTTGCTTCCTCCAAGACCTG 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 124 GTATCTGGAGATTGGCAACAATGTCTGAACTCAAAGAGCGTTTGCTTCCTCCAAGACCTG 183
Query 61 CTTCTGCTATAAACCTTAGAGGGGATGCAGGTTCTCGTCCTTCT-CTATCAGGGAGACAA 119
|||| ||||| ||||||||||| |||||||| |||||||||||| || ||||||||||||
Sbjct 184 CTTCGGCTATTAACCTTAGAGGTGATGCAGGCTCTCGTCCTTCTCCT-TCAGGGAGACAA 242
Query 120 CCACTCCTTGGAATTGATGTTTTGGGTCTCAAGAAGCGTGGACAAGGGCTTAAGTCGTGG 179
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 243 CCACTCCTTGGAGTTGATGTTTTGGGTCTCAAGAAGCGTGGACAAGGCCTTAAGTCGTGG 302
Query 180 ATTCGTGTTGATACTTTTGCCAATTCTCAGGTCATTGAGGTTGATAAGTTCACTATGATG 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 ATTCGTGTTGATACTTCTGCCAATTCTCAGGTCATTGAGGTTGATAAGTTCACTATGATG 362
Query 240 CGCAGATGTGATTTACCAGCACGTGATTTAAGGCTGCTTGATCCTTTGTTTGTGTATCCG 299
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 363 CGTAGATGTGATTTACCAGCACGGGATTTAAGGCTGCTTGATCCTTTGTTTGTGTATCCG 422
Query 300 TCAACTATTCTTGGCAGAGAGAAGGCTATTGTTGTTAACTTAGAGCAGATCCGTTGTATT 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 TCAACTATTCTTGGTAGAGAGAAGGCTATTGTTGTTAACTTAGAGCAGATCCGTTGTATT 482
Query 360 ATTACTGCGGATGAGGTTTTGCTCTTGAATTCCCTTGACAACTATGTGCTTCGCTATGTT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 ATTACTGCGGATGAGGTTTTGCTCTTGAATTCCCTTGACAACTATGTGCTTCGCTATGTT 542
Query 420 GTTGAGCTGCAGCAGAGACTAAAGGCAAGTTCTGTTACTGAGGTTTGGAATCAGGACACA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 GTTGAGCTGCAGCAGAGACTAAAGGCAAGTTCTGTTACTGAGGTTTGGAATCAGGACAGT 602
Query 480 CTCGAATTGAGCAGGAGGAGGAGTAGGAGTTTAGACAATGTGTTTCAGAACTCATCCCCT 539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 603 CTCGAATTGAGCAGGAGGAGGAGTAGGAGTTTAGACAATGTGCTTCAGAACTCATCCCCT 662
Query 540 GATTATTTACCTTTCGAGTTCAGGGCTCTTGAAGTTGCCCTTGAAGCTGCTTGCACCTTC 599
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 663 GATTATTTACCTTTCGAGTTCAGGGCTCTTGAAGTTGCACTTGAAGCTGCTTGTACCTTC 722
Query 600 CTTGATTCCCAGGCTTCAGAGTTAGAGATTGAGGCATACCCATTATTGGATGAGCTTACC 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 CTTGATTCCCAGGCTTCAGAGTTAGAGATTGAGGCATACCCATTATTGGATGAGCTTACC 782
Query 660 TCAAAGATCAGTACTTTAAACTTGGAGCGTGCACGTAGACTAAAGAGCAGACTTGTAGCA 719
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 783 TCAAAGATCAGTACTCTAAACTTGGAGCGTGCTCGTAGACTAAAGAGCAGACTTGTAGCA 842
Query 720 TTGACGAGAAGAGTTCAGAAGGTTCGGGATGAGATTGAACAGCTAATGGACGATGATGGG 779
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 TTGACGAGACGAGTTCAGAAGGTTCGGGATGAGATTGAACAGCTAATGGACGATGATGGG 902
Query 780 GATATGGCAGAAATGTATCTAACAGAGAAGAAGAAGAGAATGGAAGGATCTTTATATGGT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 GATATGGCAGAAATGTATCTAACAGAGAAGAAGAAGAGAATGGAAGGATCTTTATATGGT 962
Query 840 GATCAATCTTTACCTGTTTACCGAACAAATGATTGTTTTTCTCTGTCTGCACCAGTTTCT 899
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 963 GATCAATCTTTACCTGTTTATCGAACAAATGATTGTTTTTCTCTGTCTGCGCCAGTTTCT 1022
Query 900 CCTGTTTCTTCTCCTCCCGAGTCCCGTAGACTCGAGAAAAGCTTGAGCATTGTAAGGAGC 959
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1023 CCTGTTTCTTCTCCTCCTGAGTCCCGTAGACTTGAGAAAAGCTTGAGCATTGTAAGGAGC 1082
Query 960 CGGCATGACAGTGCTAAGAGCTCAGAAGGCGCAACCGAGAATATAGAGGAGCTAGAGATG 1019
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1083 CGGCATGACAGTGCTAGGAGCTCAGAAGACGCAACCGAGAATATAGAGGAGCTAGAGATG 1142
Query 1020 TTGCTGGAAGCATACTTTGTTGTCATCGATAGCACTCTCAACAAGCTTACCTCGTTAAAG 1079
|||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct 1143 TTGCTGGAAGCATACTTTGTTGTCATTGACAGCACTCTCAACAAGCTAACCTCGTTAAAG 1202
Query 1080 GAATACATCGATGATACCGAGGATTTCATCAACATTCAATTGGATAACGTACGGAATCAG 1139
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1203 GAGTACATCGATGATACCGAAGATTTCATCAACATTCAATTGGATAACGTACGGAATCAG 1262
Query 1140 CTGATCCAATTCGACCTGCTGCTAACTACTGCGACATTCGTTGTAGCCATCTTCGGGGTT 1199
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1263 CTGATCCAATTCGAGCTGCTGCTAACTACTGCCACATTCGTTGTAGCCATCTTCGGGGTT 1322
Query 1200 GTAGCCGGGATCTTTGGGATGAATTTTGAAATAGACTTCTTTGAACAGCCTGGTGCTTTC 1259
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1323 GTAGCCGGGATCTTTGGGATGAATTTTGAGATAGACTTCTTTGAAAAGCCTGGTGCTTTC 1382
Query 1260 AAATGGGTTCT-GACCATTACTGGAGTGTGTGGCCTTGTTGTATTTTTGGCATTCGTCTG 1318
||||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1383 AAATGGGTTTTAG-CCATTACTGGAGTGTGTGGCCTTGTTGTATTTTTGGCATTCCTCTG 1441
Query 1319 GTTCTACAAACGTAGAAGACTCATGCCTCTGTGAAGACATTACTGCCCTGACACG 1373
|| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1442 GTACTACAAACGTAGAAGACTCATGCCTCTGTGAAGACATAACTACCCTGACACG 1496
> AT1G16010.2 | Symbols: MGT2, MRS2-1 | magnesium transporter 2
| chr1:5495373-5497720 REVERSE LENGTH=1833
Length=1833
Score = 1363 bits (738), Expect = 0.0
Identities = 1157/1358 (85%), Gaps = 33/1358 (2%)
Strand=Plus/Plus
Query 12 TTGCCAACAATGTCTGAACTCAAAGAGCGTTTGCTTCCTCCAAGACCTGCTTCTGCTATA 71
||| ||||||||||||| || |||||||| |||||||||||||||||||||| |||||
Sbjct 408 TTG-CAACAATGTCTGAGCTAAAAGAGCGCCTGCTTCCTCCAAGACCTGCTTCAGCTATG 466
Query 72 AACCTTAGAGGGGATGCAGGT-TCTCGTCCTTCT-CTATCAGGGAGACAACCACTCCTTG 129
||||| |||| | | | || |||| |||||| || || || |||| ||| || ||||
Sbjct 467 AACCTCAGAGATGCTTC-TGTGACTCGGCCTTCTGCT-TCTGGAAGACCACCCCTTCTTG 524
Query 130 GAATTGATGTTTTGGGTCTCAAGAAGCGTGGACAAGGGCTTAAG-TCGTGGATTCGTGTT 188
|| ||||||| |||||||| ||||||||||||||| ||| || | || ||||||||||||
Sbjct 525 GAGTTGATGTCTTGGGTCTGAAGAAGCGTGGACAA-GGCCTACGCTCTTGGATTCGTGTT 583
Query 189 GATACTTTTGCCAATTCTCAGGTCATTGAGGTTGATAAGTTCACTATGATGCGCAGATGT 248
||||||| || ||| |||||||||| |||||||| ||||||||||||||||| || |||
Sbjct 584 GATACTTCTGGTAATACTCAGGTCATGGAGGTTGACAAGTTCACTATGATGCGTAGGTGT 643
Query 249 GATTTACCAGCACGTGATTTAAGGCTGCTTGATCCTTTGTTTGTGTATCCGTCAACTATT 308
|| ||||| || ||||||||||||||||||||||| || || |||||||| || |||||
Sbjct 644 GACTTACCCGCCCGTGATTTAAGGCTGCTTGATCCCTTATTCGTGTATCCCTCTACTATC 703
Query 309 CTTGGCAGAGAGAAGGCTATTGTTGTTAACTTAGAGCAGATCCGTTGTATTATTACTGCG 368
|| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 704 CTAGGCCGAGAGAAGGCTATTGTTGTCAACTTAGAGCAGATCCGTTGTATTATTACTGCA 763
Query 369 GATGAGGTTTTGC-TCTTGAATTCCCTTGACAACTATGTGCTTCGCTATGTTGTTGAGCT 427
|| || ||| ||| || ||||||||||||||||||| ||||| ||||||||||||||| |
Sbjct 764 GACGAAGTTCTGCTTC-TGAATTCCCTTGACAACTACGTGCTGCGCTATGTTGTTGAGTT 822
Query 428 GCAGCAGAGACTAAAGGCAAGTTCTGTTA-CTGAGGTTTGGAATCAGGACACACT-CGAA 485
|||||||||||||||| | ||| || || |||| | ||| | ||||| | | | | |
Sbjct 823 GCAGCAGAGACTAAAGACTAGTAGTG-TAGGTGAGATGTGGCAGCAGGA-AAATTCCCAG 880
Query 486 TTGAGCAGGAGGAGGAGTAGGAGTTTAGACAATG-TGTTTCAGAACTCATCCCCTGATTA 544
||||| ||||||||||| |||||||| ||||||| | ||| |||| ||||||||||||||
Sbjct 881 TTGAGTAGGAGGAGGAGCAGGAGTTTTGACAATGCT-TTTGAGAATTCATCCCCTGATTA 939
Query 545 TTTACCTTTCGAGTTCAGGGCTCTTGAAGTTGCCCTTGAAGCTGCTTGCACCTTCCTTGA 604
||||||||||||||| || ||||||||| | ||||||||||||||||| || || || ||
Sbjct 940 TTTACCTTTCGAGTTTAGAGCTCTTGAAATAGCCCTTGAAGCTGCTTGTACGTTTCTCGA 999
Query 605 TTCCCAGGCTTCAGAGTTAGAGATTGAGGCATACCCATTATTGGATGAGCTTACCTCAAA 664
|||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1000 TTCCCAGGCTTCAGAGTTGGAGATTGAGGCATACCCGTTATTAGATGAGCTTACCTCAAA 1059
Query 665 GATCAGTACTTTAAACTTGGAGCGTGCACGTAGACTAAAGAGCAGACTTGTAGCATTGAC 724
||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct 1060 GATCAGTACACTAAACTTGGAGCGTGTGCGTAGACTAAAGAGCAGGCTTGTAGCACTGAC 1119
Query 725 GAGAAGAGTTCAGAAGGTTCGGGATGAGATTGAACAGCTAATGGACGATGATGGGGATAT 784
||||||||||||||||||||||||||||| || ||||||||||| |||||||| |||||
Sbjct 1120 AAGAAGAGTTCAGAAGGTTCGGGATGAGATCGAGCAGCTAATGGATGATGATGGAGATAT 1179
Query 785 GGCAGAAATGTATCTAACAGAGAAGAAGAAGAGAATGGAAGGATCTTTATATGGTGATCA 844
||||||||||||||||||||||||||||| |||||||||||||||| | || ||||| ||
Sbjct 1180 GGCAGAAATGTATCTAACAGAGAAGAAGAGGAGAATGGAAGGATCTATGTACGGTGACCA 1239
Query 845 ATCTTTACCTGT-TTACCGAACAAATGATTGTTTTTCTCTGTCTGCACCAGTTTCTCCTG 903
|| ||| || |||| | |||||||| || | ||| | |||||||| || |||||||
Sbjct 1240 GTCCTTAT-TGGGTTACAGGTCAAATGATGGTCTATCTGTTTCTGCACCGGTGTCTCCTG 1298
Query 904 TTTCTTCTCCTCCCGAGTCCCGTAGACTCGAGAAAAGCTTGAGCATTGTAAGGAGCCGGC 963
|||||||||| || || ||||| ||||| || |||||||||||||||| ||||| ||||
Sbjct 1299 TTTCTTCTCCACCTGATTCCCGAAGACTTGATAAAAGCTTGAGCATTGCGAGGAGTCGGC 1358
Query 964 ATGACAGTGCTAAG-AGCTCAGAAGGCGCAACCGAGAATATAGAGGAGCTAGAGATGTTG 1022
|||||||||| ||| || || ||||| ||| ||||||||||| |||||||||||||||
Sbjct 1359 ATGACAGTGC-AAGGAGTTCTGAAGGTGCA---GAGAATATAGAAGAGCTAGAGATGTTG 1414
Query 1023 CTGGAAGCATACTTTGTTGTCATCGATAGCACTCTCAACAAGCTT-ACCTCGTTAAAGGA 1081
|||||||| |||||||| ||||| ||||| ||||| |||||| || || |||||||||||
Sbjct 1415 CTGGAAGCTTACTTTGTCGTCATTGATAGTACTCTAAACAAG-TTGACATCGTTAAAGGA 1473
Query 1082 ATACATCGATGATACCGAGGATTTCATCAACATTCAATTGGATAACGTACGGAATCAGCT 1141
||||| ||||| || || |||||||| ||||||||| ||||||| || |||||||||||
Sbjct 1474 GTACATTGATGACACTGAAGATTTCATTAACATTCAACTGGATAATGTGCGGAATCAGCT 1533
Query 1142 GATCCAATTCGACCTGCTGCTAACTACTGCGACATTCGTTGTAGCCATCTTCGGGGTTGT 1201
|||||| ||||| |||| || || ||||| || || ||||||||||| || ||||| ||
Sbjct 1534 GATCCAGTTCGAGTTGCTTCTGACGACTGCAACGTTTGTTGTAGCCATATTTGGGGTCGT 1593
Query 1202 AGCCGGGATCTTTGGGATGAATTTTGAAATAGACTTCTTTGAA-CAGCCTGGTGCTTTCA 1260
|| ||||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||
Sbjct 1594 TGCTGGGATCTTTGGGATGAACTTTGAGATAGACTTCTTC-AATCAGCCAGGTGCATTCA 1652
Query 1261 AATGGGTTCTGACCATTACTGGAGTGTGTGGCCTTGTTG-TATTTTTGGCATTCGTCTGG 1319
|||||| || | ||||||||||| |||||| |||| | |||||| |||||||||||||
Sbjct 1653 GATGGGTACTCATAATTACTGGAGTATGTGGCTTTGT-GATATTTTCGGCATTCGTCTGG 1711
Query 1320 TTCTACAAACGTA--GAAGACTCATGCCTCTGTGAAGA 1355
|||| ||| ||| |||||||||||||||| | ||||
Sbjct 1712 TTCTTCAA--GTACAGAAGACTCATGCCTCTAT-AAGA 1746
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67620134115
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5