BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927512
Length=2774
Score E
Sequences producing significant alignments: (Bits) Value
AT1G79990.1 | Symbols: | structural molecules | chr1:30084114-... 4525 0.0
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:194993... 1901 0.0
> AT1G79990.1 | Symbols: | structural molecules | chr1:30084114-30092238
FORWARD LENGTH=3934
Length=3934
Score = 4525 bits (2450), Expect = 0.0
Identities = 2652/2750 (96%), Gaps = 11/2750 (0%)
Strand=Plus/Plus
Query 23 GCGTAAGTTTGCTCAAAGATCCGAAAGAGTCAAATCTGTAGATCTCCATCCCACAGAGCC 82
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 906 GCGTAAGTTTGCTCAAAGATCAGAAAGAGTCAAATCTGTAGATCTCCATCCAACAGAGCC 965
Query 83 ATGGATCCTGGCAAGTTTGTATTCCGGAACTGTGTGCATCTGGAATTACCAGACACAGAC 142
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 966 ATGGATCCTGGCAAGTTTGTATTCCGGAACTCTGTGCATCTGGAATTACCAGACCCAGAC 1025
Query 143 AATGGTAAAATCTTTCGACGTGACTGAATTGCCTGTTCGGTCAGCAAAGTTCATTGCACG 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 AATGGTAAAATCTTTCGACGTGACTGAATTGCCTGTTCGGTCAGCAAAGTTCATTGCACG 1085
Query 203 GAAGCAGTGGGTTGTAGCTGGAGCTGATGACATGTTTATTCGTGTCTACAACTACAACAC 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 GAAGCAGTGGGTTGTAGCTGGAGCTGATGACATGTTTATTCGTGTCTACAACTACAACAC 1145
Query 263 AATGGATAAGATCAAAGTATTTGAGGCTCATGCTGATTACATTCGTTGTGTTGCTGTTCA 322
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1146 TATGGATAAGATCAAAGTATTTGAGGCTCATGCTGATTACATTCGCTGTGTTGCTGTTCA 1205
Query 323 TCCCTCCCTTCCCTATGTGTTATCATCATCTGATGATATGCTCATCAAGCTCTGGGACTG 382
|||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1206 TCCCACGCTTCCCTATGTCTTATCATCATCTGATGATATGCTCATCAAGCTCTGGGACTG 1265
Query 383 GGATAAGGGTTGGCTCTGCACTCAGATTTTCGAAGGGCATTCCCATTATGTTATGCAAGT 442
||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1266 GGAAAAGGGTTGGCTTTGCACTCAAATTTTCGAAGGCCATTCCCATTATGTTATGCAAGT 1325
Query 443 GACTTTCAACCCAAAAGACTCCAATACTTTTGCTAGTGCATCCCTTGACCGTACCATCAA 502
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1326 CACTTTCAACCCCAAAGACACCAATACTTTTGCTAGTGCATCCCTTGACCGTACCATAAA 1385
Query 503 AATATGGAATCTTGGCTCTCCGGATCCAAATTTTACTTTGGATGCACATCTGAAAGGGGT 562
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1386 AATATGGAATCTTGGCTCTCCGGATCCAAATTTTACTTTGGATGCACATCTCAAAGGGGT 1445
Query 563 AAACTGTGTAGACTACTTTACTGGTGGGGATAAACCATACCTAATCACTGGTTCTGATGA 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 AAACTGTGTAGACTACTTTACTGGTGGGGATAAACCATACCTAATCACTGGTTCTGATGA 1505
Query 623 TCATACTGCTAAGGTGTGGGATTACCAAACGAAGAGTTGCGTTCAGACACTTGAAGGTCA 682
|||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct 1506 TCATACTGCTAAGGTGTGGGATTACCAAACAAAGAGTTGCGTTCAGACTCTCGAAGGTCA 1565
Query 683 TACACACAATGTTTCTGCAGTATCTTTTCATCCAGAGCTCCCAATAATTATTACAGGATC 742
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1566 TACACACAATGTTTCTGCAGTATCTTTTCATCCAGAGCTACCTATAATTATTACAGGATC 1625
Query 743 CGAGGATGGAACTGTTCGTATATGGCATGCCACCACTTACAGGCTTGAGAATACATTGAA 802
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1626 CGAGGATGGAACTGTTCGCATATGGCACGCCACCACTTACAGGCTTGAGAATACATTGAA 1685
Query 803 CTATGGCCTTGAGAGGGTTTGGGCTATTGGACACATTAAAGGTTCACGCCGGGTTGTAAT 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1686 CTATGGCCTTGAGAGGGTTTGGGCTATTGGACACATTAAAGGTTCACGCCGGGTTGTAAT 1745
Query 863 TGGTTATGACGAAGGATCCATAATGGTGAAACTTGGCCGTGAAATACCAGTGGCTAGTAT 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1746 TGGTTATGACGAAGGATCCATAATGGTGAAACTTGGCCGTGAAATACCAGTGGCTAGTAT 1805
Query 923 GGATAACAGCGGAAAAATTATTTGGGCTAAACACAATGAGATACATACTGTAAACATCAA 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1806 GGATAACAGCGGAAAAATTATTTGGGCTAAACACAATGAGATACATACTGTAAACATCAA 1865
Query 983 GAGTGTGGGCGCAGATGAGGTCACTGATGGTGAGAGACTGCCTTTGGCTGTTAAAGAGCT 1042
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1866 GAGTGTGGGCGCAGATGAGGTCACTGATGGTGAGAGACTTCCTTTGGCCGTTAAAGAGCT 1925
Query 1043 AGGGACCTGCGATCTTTATCCTCAAAGCTTGAAGCACAACCCTAATGGTAGGTTTGTAGT 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1926 AGGGACCTGCGATCTTTATCCTCAAAGCTTGAAGCACAACCCTAATGGTAGGTTTGTGGT 1985
Query 1103 TGTTTGTGGAGATGGTGAGTACATCATCTACACTGCCTTGGCGTGGCGAAATAGGTCATT 1162
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1986 AGTTTGTGGAGATGGTGAGTATATTATCTACACTGCCTTGGCGTGGCGAAATAGGTCATT 2045
Query 1163 TGGCTCTGGGCTGGAATTTGTTTGGTCATCTGATGGGGAGCATGCTGTCAGGGAAAGCTC 1222
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2046 TGGCTCTGCGCTAGAATTTGTTTGGTCATCTGATGGGGAGCATGCTGTCAGGGAAAGCTC 2105
Query 1223 GACAAAGATCAAGATTTTCAGCAAGAATTTCCAGGAAAAGAAGACTGTGAGACCCACTTT 1282
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2106 GACAAAGATCAAGATCTTCAGCAAGAATTTCCAGGAAAAGAAGACTGTGAGACCCACCTT 2165
Query 1283 CTCAGCAGAGCACATTTTTGGTGGGACGTTATTGGCAATGTGCTCAAGTGATTTTATCTG 1342
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 2166 CTCAGCAGAGCACATTTTTGGTGGGACGTTATTGACAATGTGCTCAAGTGATTTTATATG 2225
Query 1343 CTTCTATGATTGGGCGGAATGTAGGTTGATTAGGCGAATAGATGTTACTGTTAAAAATCT 1402
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2226 CTTCTATGATTGGGCGGAATGTAGGTTGATTAGGCGAATAGATGTTACTGTCAAAAATCT 2285
Query 1403 TTATTGGGCGGACAGTGGTGATCTAGTTGCAATTGCCAGTGATTCATCATTCTACATCCT 1462
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2286 TTATTGGGCGGACAGTGGTGATCTAGTTGCAATTGCCAGTGATACATCATTCTACATCCT 2345
Query 1463 TAAGTTTAATCGCGAGATTGTTTCCTCTTATTTTGATGGCGGTAAACAAATTGATGAGGA 1522
|||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2346 TAAGTTCAATCGTGACATTGTTTCCTCTTATTTTGATGGCGGTAAACAAATTGATGAGGA 2405
Query 1523 AGGCATTGAAGACGCATTTGAGCTTCTCAATGAAACCAATGAACGTGTTCGGACAGGCTT 1582
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2406 AGGCATTGAGGACGCATTTGAGCTTCTCAATGAAACCAATGAACGTGTTCGGACTGGCTT 2465
Query 1583 ATGGGTTGGGGATTGTTTTATCTATACCAACTCTTCTTGGAGGCTTAACTACTGTGTTGG 1642
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2466 ATGGGTTGGGGATTGTTTTATCTATACCAACTCTTCTTGGAGGCTTAATTACTGTGTTGG 2525
Query 1643 TGGTGAGGTAACGACAATGTATCATCTGGACCGTCCTATGTACTTGTTGGGTTATCTTGC 1702
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2526 TGGTGAGGTAACTACAATGTATCATCTGGACCGTCCTATGTACTTGTTGGGTTATCTCGC 2585
Query 1703 TAATCAAAGCCGGGTTTATTTGATTGACAAAGAGTTCAATGTTATTGGATACACTTTACT 1762
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2586 TAATCAAAGCAGGGTTTATTTGATTGACAAAGAGTTCAATGTTATTGGATACACTTTACT 2645
Query 1763 TTTAAGTTTGATTGAGTACAAGACTCTTGTGATGCGTGGAGATTTGGAACAGGCTAATGA 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2646 TTTAAGTTTGATTGAGTACAAGACTCTTGTGATGCGTGGAGATTTGGAACAGGCTAATGA 2705
Query 1823 AATCTTACCTTCAATTCCTAAGGAGCATCATAATAGCGTGGCACACTTTTTGGAATCACG 1882
| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 2706 AGTCTTACCTTCAATTCCTAAGGAGCACCATAATAGCGTGGCACACTTTTTGGAGTCACG 2765
Query 1883 TGGTATGACAGAAGATGCTCTACAGGTAGCTACTGACCCTGATTACAGATTTGAGTTGGC 1942
||| |||||||||||||||||| | ||||| ||||| ||||| |||||||||||||||||
Sbjct 2766 TGGCATGACAGAAGATGCTCTAGAAGTAGCAACTGATCCTGACTACAGATTTGAGTTGGC 2825
Query 1943 CGTACAGCTCGGTAGATTGGCGGTCGCAAAGGACATTGCTGTAGAGGCACAAAATGAGTC 2002
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 2826 CATACAGCTCGGTAGATTGGCTGTCGCAAAGGACATTGCTGTAGAGGCACAAAATGAATC 2885
Query 2003 TAAATGGAAGCAACTTGGAGAATTAGCTATGTCCACTGGGAAGCTGGATATGGCTGAGGA 2062
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 2886 TAAATGGAAGCAACTTGGAGAATTAGCTATGTCAAGTGGGAAGCTGGATATGGCTGAGGA 2945
Query 2063 ATGCATGAGGCATGCTATGGATTTGAGTGGACTGTTGCTGCTTTATTCTTCATTGGGAGA 2122
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 2946 ATGCATGAGGCATGCTATGGATTTGAGTGGTCTGCTGCTGCTTTATTCTTCATTGGGAGA 3005
Query 2123 TGCAGAGGGATTGATGAAGCTGTCAGCACTTGCCAAAGAGCAAGGAAAGAATAATGTCGC 2182
|||||| ||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||
Sbjct 3006 TGCAGATGGAATGATGAAGCTGGCAGCACTTGCAAAAGAGCAAGGAAAGAACAATGTCGC 3065
Query 2183 TTTTCTTTGCTTGTTCATGTTGGGTCAAGTAGAAGACTGCCTGCATCTGTTGGTGGAAAG 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3066 TTTTCTTTGCTTGTTCATGTTGGGTCAAGTAGAAGACTGCCTGCATCTGTTGGTGGAAAG 3125
Query 2243 TAATCGAATACCTGAAGCCGCTCTGATGGC-ACGATCGTACCTTCCAAGCAAGGTCTCCG 2301
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 3126 TAATCGAATACCTGAAGCCGCTCTGATGGCGA-GATCGTACCTTCCAAGCAAGGTCTCCG 3184
Query 2302 AAATAGTGGCATTGTGGAGAAATGATTTGACCAAGATAAGTCCAAAGGCTGCTGAATCTC 2361
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3185 AAATAGTGGCATTGTGGAGAAACGATTTGACCAAGATAAGTCCAAAGGCTGCTGAATCTC 3244
Query 2362 TGGCTGATCCCGAAGAGTATCCCAATCTCTTTGAGGAGTGGCAAGTCACCCTGTCCCTTG 2421
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3245 TGGCTGATCCCGAAGAGTATCCCAATCTCTTTGAGGAGTGGCAAGTCGCCCTGTCCCTTG 3304
Query 2422 AAAATAGAGCTGCAGAGACAAGGGGCGTCCATCCTCCTGCTGGGGATTATTGTAGTCATG 2481
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3305 AAAATAGAGCTGCAGAGACGAGGGGCGTCCATCCTCCTGCTGGGGATTATTGTAGTCATG 3364
Query 2482 CAGACAGAGATCATACAACTTTGGTGGAAGCTTTTAGAATTATGCAAATAGAGGAAGAGG 2541
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 3365 CAGACAGAGATCATACAACTTTAGTGGATGCTTTTAGAATTATGCAAATAGAGGAAGAGG 3424
Query 2542 GGGGACTTGAGCAAGGGGATGTTGTCGACGAGTTTGGGGAAGAGGG--A-GA-GGA-AG- 2595
| |||||||||||||||||||| |||||||| ||||||||||||| | || ||| ||
Sbjct 3425 GTCGACTTGAGCAAGGGGATGTTCTCGACGAGGTTGGGGAAGAGGGGGAAGATGGAGAGG 3484
Query 2596 AGGAGGATG-GG-G-ATCATCAGGAAGAGAGTAGTGATGGGAGGCAACAGAATGTGGAAG 2652
| ||||| | || | ||| |||||||||||||||||||||||| || |||||||||||||
Sbjct 3485 AAGAGGAGGAGGAGGATCGTCAGGAAGAGAGTAGTGATGGGAGACAGCAGAATGTGGAAG 3544
Query 2653 AAGAGGCCGTAGTGGTGGACGCTGACTCTACGGATGGTGCTGTGCTAGTTAATGGGAACG 2712
||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3545 AAGAGGCTGTTGTGGTGGACGCTGACTCTACGGATGGTGCTGTGCTAGTTAATGGTAACG 3604
Query 2713 AGTCTGAAGAACAGTGGGTTCTAACACCGCCACAGGAGTAGGGTTGGTGA 2762
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3605 AGTCTGAAGAACAGTGGGTTCTAACACCGCCACAAGAGTAGGGTTGGTGA 3654
> AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:19499343-19505757
FORWARD LENGTH=3099
Length=3099
Score = 1901 bits (1029), Expect = 0.0
Identities = 1985/2446 (81%), Gaps = 67/2446 (3%)
Strand=Plus/Plus
Query 36 CAAAGATCCGAAAGAGTCAAATCTGTAGATCTCCATCCCACAGAGCCATGGATCCTGGCA 95
||||| || || ||||| |||||||| ||||| ||||| ||||| |||||||| || |||
Sbjct 246 CAAAGGTCTGAGAGAGTTAAATCTGTGGATCTTCATCCTACAGAACCATGGATTCTTGCA 305
Query 96 AGTTTGTATTCCGGAA-CTGTGTGCATCTGGAATTACCAGACACAGACAATGGTAAAAT- 153
||||||||||| |||| || |||| || ||||| |||||||| ||| |||| |||||
Sbjct 306 AGTTTGTATTCTGGAACCT-TGTGTATTTGGAACTACCAGACGCAGGTGATGGCAAAATC 364
Query 154 CTTTCGACGTGACTGAATTGCCTGTTCGGTCAGCAAAGTTCATTGCACGGAAGCAGTGGG 213
|||| || ||||||||||| || ||||||||||| ||||| | ||||| ||||| ||||
Sbjct 365 CTTT-GAGGTGACTGAATTACCAGTTCGGTCAGCCAAGTTTGTAGCACGAAAGCAATGGG 423
Query 214 TTGTAGCTGGAGCTGATGACATGTTTATTCGTGTCTACAACTACAACACAATGGATAAGA 273
|||| || ||||||||||| |||| ||| ||||| ||||| |||||||| ||||| |||
Sbjct 424 TTGTCGCAGGAGCTGATGATATGTATATCCGTGTATACAATTACAACACCATGGACAAGG 483
Query 274 TCAAAGTATTTGAGGCTCATGCTGATTACATTCGTTGTGTTGCTGTTCATCCCTCCCTTC 333
| ||||| |||||||||||| | || |||||| | ||||| ||||||||||| ||||||
Sbjct 484 TTAAAGTGTTTGAGGCTCATTCAGACTACATTAGGTGTGTGGCTGTTCATCCAACCCTTC 543
Query 334 CCTATGTGTTATCATCATCTGATGATATGCTCATCAAGCTCTGGGACTGGGATAAGGGTT 393
| |||||| | ||||| ||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct 544 CATATGTGCTGTCATCTTCTGATGATATGCTCATAAAGCTTTGGGACTGGGAAAAGGGTT 603
Query 394 -GGCTCTGCACTCAGATTTTCGAAGGG-CATTCCCATTATGTTATGCAAGTGAC-TTTCA 450
|||| ||||||||||| |||| |||| || || || ||||| |||||||| || ||| |
Sbjct 604 GGGCT-TGCACTCAGATATTCG-AGGGACACTCACACTATGTGATGCAAGTCACATTT-A 660
Query 451 ACCCAAAAGACTCCAATACTTTTGCTAGTGCATCCCTTGACCGTACCATCAAA-ATATGG 509
| ||||||||| |||| |||||||| |||||||||||||| |||||||| ||| || |||
Sbjct 661 ATCCAAAAGACACCAACACTTTTGCCAGTGCATCCCTTGATCGTACCAT-AAAGATTTGG 719
Query 510 AATCTTGGCTCTCCGGATCCAAATTTTACTTTGGATGCACATCTGAAAGGGGTAAACTGT 569
|||||||| || || || ||||||||||| |||||||| |||| |||||| ||||| |||
Sbjct 720 AATCTTGGTTCCCCAGACCCAAATTTTACATTGGATGCCCATCAGAAAGGAGTAAATTGT 779
Query 570 GTAGACTACTTT-ACTGGTGGGGATAAACCATACCTAATCACTGGTTCTGATGATCATAC 628
||||| || ||| || ||||| ||||| || || |||| || || ||||||||||| ||
Sbjct 780 GTAGATTA-TTTCACCGGTGGTGATAAGCCCTATTTAATTACCGGCTCTGATGATCACAC 838
Query 629 TGCTAAGGTGTGGGATTACCAAACGAAGAGTTGCGTTCAGACACTTGAAGGTCATACACA 688
||||||||| ||||| |||||||| || ||||| || ||||| || || || || |||||
Sbjct 839 TGCTAAGGTCTGGGACTACCAAACAAAAAGTTGTGTACAGACCCTGGAGGGGCACACACA 898
Query 689 CAATGTTTCTGCAGTATCTTTTCATCCAGAGCTCCCAATAATTATTACAGGATCCGAGGA 748
|||||| |||||||||| ||| ||||||||||| ||||| || || ||||| || || ||
Sbjct 899 CAATGTATCTGCAGTATGTTTCCATCCAGAGCTTCCAATTATAATCACAGGTTCTGAAGA 958
Query 749 TGGAACTGTTCGTATATGGCATGCCACCACTTACAGGCTTGAGAATACATTGAACTATGG 808
||| || ||||| || |||||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct 959 TGGCACCGTTCGCATTTGGCATGCAACCACATACAGGCTAGAGAACACATTGAATTATGG 1018
Query 809 CCTTGAGAGGGTTTGGGCTATTGGACACATTAAAGGTTCACGCCGGGTTGTAATTGGTTA 868
||||||||| || ||||| ||||| |||||||| |||||||||||||||| || || ||
Sbjct 1019 CCTTGAGAGAGTCTGGGCAATTGGTTACATTAAAAGTTCACGCCGGGTTGTGATCGGATA 1078
Query 869 TGACGAAGGATCCATAATGGTGAAACTTGGCCGTGAAATACCAGTGGCTAGTATGGATAA 928
||| |||||| |||| ||||| |||||||| || ||||| || || ||||| ||||| ||
Sbjct 1079 TGATGAAGGAACCATCATGGTTAAACTTGGACGAGAAATTCCTGTCGCTAGCATGGACAA 1138
Query 929 CAGCGGAAAAATTATTTGGGCTAAACACAATGAGATACATACTGTAAACATCAAGAGTGT 988
| ||||||||| || |||||||| || ||||| || || |||| ||||||||| ||| |
Sbjct 1139 TACCGGAAAAATCATATGGGCTAAGCATAATGAAATTCAAACTGCAAACATCAAAAGTAT 1198
Query 989 GGGCGCAGA-T--GAGGTCACTGATGGTGAGAGACTGCCTTTG-GCTGTTAAAGAGCTAG 1044
|| ||||| | ||||| |||||||| || || |||| ||| | |||||||||| | |
Sbjct 1199 TGGTGCAGATTACGAGGTTACTGATGGAGAAAGGTTGCCCTTGAG-TGTTAAAGAGTTGG 1257
Query 1045 GGACCTGCGATCTTTATCCTCAAAGCTTGAAGCACAACCCTAATGGTAGGTTTGTAGTTG 1104
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || |
Sbjct 1258 GGACCTGTGATCTTTATCCACAAAGCTTGAAGCACAACCCTAATGGGAGGTTTGTCGTAG 1317
Query 1105 TTTGTGGAGATGGTGAGTACATCATCTACACTGCCTTGGCGTGGCGAAATAGGTCATTTG 1164
| ||||| || || || || || |||||||| || ||||| ||| |||||||||||||||
Sbjct 1318 TCTGTGGTGACGGAGAATATATAATCTACACGGCTTTGGCTTGGAGAAATAGGTCATTTG 1377
Query 1165 GCTCTGGGCTGGAATTTGTTTGGTCATCTGATGGGGAGCATGCTGTCAGGGAAAGCTCGA 1224
| ||||| |||||||||||||||||||| || |||||| ||| || || |||||||| |
Sbjct 1378 GTTCTGGACTGGAATTTGTTTGGTCATCCGAGGGGGAGTGTGCGGTTAGAGAAAGCTC-A 1436
Query 1225 -CAAAGATCAAGAT-TTTCAGCAAGAATTTCCAGGAAAAGAAGACTGTGAGACCC-ACTT 1281
||||||| || || ||| ||||| |||||||||||||||| || | | | ||| ||||
Sbjct 1437 TCAAAGATTAAAATATTT-AGCAAAAATTTCCAGGAAAAGAGGAGTATCCG-CCCTACTT 1494
Query 1282 TCTCAGCAGAGCACATTTTTGGTGGGACGTTATTGGCAATGTGCTCAAGTGATTTTATCT 1341
| ||||| ||| | || ||||| || || || || || ||||| ||||||||||| ||||
Sbjct 1495 TTTCAGCTGAGAAGATCTTTGGAGGAACCTTGTTAGCTATGTGTTCAAGTGATTTCATCT 1554
Query 1342 GCTTCTATGATTGGGCGGAATGTAGGTTGATT-AGGCGAATAGATGTTACTGTTAAA-AA 1399
|||| ||||||||||| ||||||||| ||||| | || || || || |||| |||| ||
Sbjct 1555 GCTTTTATGATTGGGCTGAATGTAGGCTGATTCA-ACGTATTGACGTCACTG-TAAAGAA 1612
Query 1400 TCTTTATTGGGCGGACAGTGGTGATCTAGTTGCAATTGCCAGTGATTCATCATTCTACAT 1459
||| |||||||| |||||||||||| |||| || ||||| ||||| |||||||||||||
Sbjct 1613 TCTATATTGGGCTGACAGTGGTGATTTAGTAGCCATTGCTAGTGACACATCATTCTACAT 1672
Query 1460 CCTT-AAGTTTAATCGCGAGATT-GTTTCCTCTTATTTTGATGGCGGTAA-ACAAATTGA 1516
||| || || || ||||| || ||| |||| |||||||| |||| || || | |||
Sbjct 1673 -CTTGAAATTCAACCGCGA-CTTAGTTACCTCACATTTTGATAGCGG-AAGACCTACTGA 1729
Query 1517 TGAGGAAGGCATTGAAGACGCATTTGAGCTTCTCAATGAAACCAATGAACGTGTTCGGAC 1576
|| ||||| |||| || || |||||| ||||| |||||| ||||||||||| ||||
Sbjct 1730 GGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTCCATGAAAATGATGAACGTGTTAGGAC 1789
Query 1577 AGGCT-TATGGGTTGGGGATTGTTTTATCTATACCAACTCTTCTTGGAGGCTTAACTACT 1635
||| | |||||||||| || ||||| || || | ||||||||| |||| |||||||||||
Sbjct 1790 AGG-TATATGGGTTGGTGACTGTTTCATTTACAACAACTCTTCCTGGAAGCTTAACTACT 1848
Query 1636 GTGTTGGTGGTGAGGTAACGACAATGTATCATCTGGACCGTCCTATGTACTTGTTGGGTT 1695
||||||| || |||||||| |||||||||||| ||||||| || ||||| |||||||| |
Sbjct 1849 GTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGCCCAATGTATTTGTTGGGAT 1908
Query 1696 ATCTTGCTAA-TCAAAGCCGGGTTTAT-TTGATTGACAAAGAGTTCAATGTTATTGGATA 1753
||||||| || |||||| ||||||| | ||| | |||||||| ||||||||||| || ||
Sbjct 1909 ATCTTGC-AAGTCAAAGTCGGGTTT-TCTTGGTAGACAAAGAATTCAATGTTATAGGGTA 1966
Query 1754 CACTTTACTT-TTAAGTTTGATTGAGTACAAGACTCTTGTGATGCGTGGAGATTTGGA-A 1811
||| || || |||| |||||||||||||||||||||||||||| || ||||| || |
Sbjct 1967 CACCTT-GTTGCTAAGCCTGATTGAGTACAAGACTCTTGTGATGCGGGGTGATTTAGACA 2025
Query 1812 CAGGCTAATGAAATCTTACCTTCAATTCCTAAGGAGCATCATAATAGCGTGGCACACTTT 1871
|| | | ||||||||||||| |||||||||| || || ||||| || || || || |||
Sbjct 2026 AAGCC-AGTGAAATCTTACCTACAATTCCTAAAGATCAGCATAACAGTGTTGCTCA-TTT 2083
Query 1872 -TTGGAATCACGTGGTATGACAGAAGATGCTCTACAGGTAGCTACTGACCCTGATTACAG 1930
||||| ||||| || |||| ||||||||||| | | || || || ||||| |||||
Sbjct 2084 CTTGGAGTCACGGGGAATGATTGAAGATGCTCTGGAAATTGCAACAGATCCTGACTACAG 2143
Query 1931 ATTTGAGTTGGCCGTACAGCTCGGTAGA-TTGGCGGTCGCAAAGGACATTGCTGTAGAGG 1989
||||||||||||| |||| || |||||| ||| | ||| |||| || ||||| || |
Sbjct 2144 ATTTGAGTTGGCCATACAACTGGGTAGACTTGAAATT-GCACAGGAAATCGCTGTGGAAG 2202
Query 1990 CACAAAATGAGTCTAAATGGAAGCAACTT-GGAGAATTAGCTATGTCCACTGGGAAGCTG 2048
||| | || ||||| ||||| ||| || ||||| |||||||||||| | || ||||||
Sbjct 2203 TACAGAGCGAATCTAAGTGGAAACAA-TTAGGAGAGTTAGCTATGTCCTCCGGAAAGCTG 2261
Query 2049 GATATGGCTGAGGAATGCATGAGGCATGCTATGGATTTGAGTGGACTGTTGCTGCTTTAT 2108
| ||||||||||||||||||| | |||| |||||||||||||| |||| || ||||||
Sbjct 2262 CAAATGGCTGAGGAATGCATGAAGTATGCGATGGATTTGAGTGGTTTGTTACTTCTTTAT 2321
Query 2109 TCTTCAT-TGGGAGATGCAGAGGGAT-TGATGAAGCT-GTCAGCACTTGCCAAAGAGCAA 2165
||||| | |||||||||| || || | | | || || | || ||||||| ||||| |||
Sbjct 2322 TCTTC-TCTGGGAGATGCTGAAGG-TGTAACAAAACTTG-CAACACTTGCTAAAGAACAA 2378
Query 2166 GGAAAGAATAATGTCGCTTTTCTTTGCTTGTTCATGTTGGGTCAAGTAGAAGACTGCCTG 2225
|| ||||| |||||||| ||||||||| | |||||| ||||| || | ||||| || ||
Sbjct 2379 GGGAAGAACAATGTCGCCTTTCTTTGCCTATTCATGCTGGGTAAACTGGAAGATTGTTTG 2438
Query 2226 CA-TCTGTTGGTGGAAAGTAATCGAATACCTGAAGCCGCTCTGATGGCACGATCGTACCT 2284
|| | | |||||||| ||||| || ||||| ||||| ||||||||||||||||| || ||
Sbjct 2439 CAGT-TATTGGTGGAGAGTAACCGGATACCAGAAGCTGCTCTGATGGCACGATCATATCT 2497
Query 2285 TCCAAGCAAGGTCTCCGAAATAGTGGCA-TTGTGGAG-AAATGATTTGACCAAGAT-AAG 2341
||| ||||| || || || ||||| || || ||||| ||| ||| | | |||| | ||
Sbjct 2498 TCCGAGCAAAGTTTCTGAGATAGTAGCTCTT-TGGAGGAAA-GATCTCAGCAAGGTTAAT 2555
Query 2342 TCCAAAGGCTGCTGAATCTCTGGCTGATCCCGAAGAGTATCCCAA-TCTCTTTGAGGAGT 2400
|| |||| | || |||||| |||||||||| || ||||| | ||| ||| ||||| || |
Sbjct 2556 TCAAAAG-CAGCAGAATCTTTGGCTGATCCTGAGGAGTA-CTCAAATCTTTTTGAAGATT 2613
Query 2401 GGCAAGTCACCCTGTCCCTTGAAAATAGAGCTGCAGAGACAAGGGG 2446
||||||| | || || | ||| || ||||| ||||||||||||
Sbjct 2614 GGCAAGTTGCTCTTTCTGTGGAAGCTAAAGCTGTAGAGACAAGGGG 2659
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137808592421
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5