BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927551
Length=1732
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02020.1 | Symbols: AK3 | aspartate kinase 3 | chr3:340546-3... 2905 0.0
AT5G14060.1 | Symbols: CARAB-AK-LYS | Aspartate kinase family p... 1535 0.0
> AT3G02020.1 | Symbols: AK3 | aspartate kinase 3 | chr3:340546-343835
REVERSE LENGTH=2195
Length=2195
Score = 2905 bits (1573), Expect = 0.0
Identities = 1681/1734 (97%), Gaps = 4/1734 (0%)
Strand=Plus/Plus
Query 1 TCTTCTTCAGAGCTTATTGAGTAATGGCGGCTTCAATGCAGTTCTACGGAGTTCAAACAC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 300 TCTTCTTCAGAGCTTATTGAGTAATGGCGGCTTCAATGCAGTTCTACGGAGTTAAAACAC 359
Query 61 CAGAACTTGCCTTAAACTC-AAAAGCGATTGAGTTTGGCTCAAAGGGGCTGAATTTCTCA 119
||||||||||||||||||| ||||| |||||||||| ||||||||||||| || ||||||
Sbjct 360 CAGAACTTGCCTTAAACTCAAAAAG-GATTGAGTTTAGCTCAAAGGGGCTCAACTTCTCA 418
Query 120 GCACTCGTGTCCTCTGCTCGTGTATTCTCTAGAAACGTAGATCATGCTTGTAAGAACATC 179
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 419 GCACTCGTGTCCTCTGCTCGTGTATTCTCTAGAAACGTAGATCGTTCTTGTAAGAACATC 478
Query 180 GCTCTGAGAGTTACTTGTGAAGCCGGAAGAGTGGAGCTGCTAGAAAGAAAAGGCTCAGAG 239
||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||
Sbjct 479 GCTCTGAGAGTTACTTGTGAAGCGGGAAGAGTGGAGCTGCTAGAGAGAAAAGCCTCAGAG 538
Query 240 ACTTTCAAGTTAAACAGAACTGAGAAAAAATTGACATGTGTAATGAAATTTGGTGGCTCA 299
|||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||
Sbjct 539 ACTTTCAAGTTAAACAAAACTGAGAAAAAATTGACCTGTGTAATGAAATTCGGTGGCTCA 598
Query 300 TCAGTGGCATCAGCAGAAAGGATGAAACAAGTTGCCAAACTCATACTCAGCTTCCCAGAC 359
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 599 TCAGTGGCATCAGCAGAAAGGATGATACAAGTTGCCAAACTCATACTCAGCTTCCCAGAT 658
Query 360 GAGAAGCCTGTTGTTGTGCTATCAGCAATGGCAAAGACCACCAATAAGCTTTTGATGGCT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GAGAAGCCTGTTGTTGTGCTATCAGCAATGGCAAAGACCACCAATAAGCTTTTGATGGCT 718
Query 420 GGAGAGAAGGCTGTTTGCTGCGGTGTCACCAACGTCGACACTATTGAAGAGTTGAGCTAT 479
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 719 GGGGAGAAGGCTGTTTGCTGCGGTGTCACCAACGTCGACACTATCGAAGAGTTGAGCTAT 778
Query 480 ATAAAGGAACTCCATATAAGGACTGCTCATGAGCTTGGAGTGGAAACATCAGTTATTGCA 539
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 779 ATAAAGGAACTCCATATAAGGACTGCTCATGAGCTTGGAGTGGAAACAGCAGTTATTGCA 838
Query 540 GAACACT-TAGAAGGACTGGAACAGCTTCTGAAAGGCATCGCAATGATGAAAGAATTAAC 598
||||| | |||||||||||||||||||||| |||||| ||||||||||||| ||||||||
Sbjct 839 GAACA-TCTAGAAGGACTGGAACAGCTTCTTAAAGGCGTCGCAATGATGAAGGAATTAAC 897
Query 599 TTTACGCTCAAGAGATTACTTGGTTTCATTTGGAGAATGCATGTCCACAAGGCTATTTGC 658
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 898 TTTACGCTCAAGAGACTACTTGGTTTCATTTGGAGAATGCATGTCCACTAGGCTATTTGC 957
Query 659 TGCGTACTTGAACAAAATTGGGCACAAAGCACGACAGTATGATGCATTTGAGATTGGGAT 718
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 958 TGCGTACCTGAACAAAATTGGGCACAAAGCACGACAGTATGATGCATTTGAGATCGGGAT 1017
Query 719 TATCACCACAGATGACTTCACTAATGCTGATATTCTTGAGGCAACATACCCGGCGGTTTC 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 TATCACCACAGATGACTTCACTAATGCTGATATTCTTGAGGCAACATACCCGGCGGTTTC 1077
Query 779 AAAAAAGTTACTTGGTGACTGGAGCAAGGAAAATGCAGTCCCCATTGTCACAGGCTTCCT 838
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1078 GAAAAAGTTACTTGGTGACTGGAGCAAGGAAAATGCACTCCCCGTTGTCACAGGCTTCCT 1137
Query 839 TGGAAAGGGATGGAGATCTTGTGCTGTAACTACGCTTGGTAGAGGAGGTAGCGATTTGAC 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 TGGAAAGGGATGGAGATCTTGTGCTGTAACTACGCTTGGTAGAGGAGGTAGCGATTTGAC 1197
Query 899 TGCAACAACGATCGGGAAGGCTTTAGGTTTGCGGGAGATCCAGGTTTGGAAAGATGTGGA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 TGCAACAACGATCGGGAAGGCTTTAGGTTTGCGGGAGATCCAGGTTTGGAAAGATGTGGA 1257
Query 959 TGGAGTTTTGACTTGTGATCCAAACATTTACTGCGGAGCTCAACCTGTTCCACACTTGAC 1018
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TGGAGTTTTGACTTGTGATCCTAACATTTACTGCGGAGCTCAACCTGTTCCACACTTGAC 1317
Query 1019 ATTTGATGAGGCTGCTGAACTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTTTCCAT 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 ATTTGATGAGGCTGCTGAACTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTTTCCAT 1377
Query 1079 GCGCCCAGCACGAGAAGGTAACATTCCTGTAAGGGTTAAGAACTCTTACAATCCCACTGC 1138
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 GCGCCCAGCGCGAGAAGGTAACATTCCTGTAAGGGTTAAGAACTCTTACAATCCCACTGC 1437
Query 1139 TCCAGGAACTGTCATCACCAGATCAAGAGACATGAGCAAGGCTGTATTGACCAGCATCGT 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TCCAGGAACTGTCATCACCAGATCAAGAGACATGAGCAAGGCTGTATTGACCAGCATCGT 1497
Query 1199 TCTGAAACGTAATGTTACCATGTTAGACATCACTAGCACCCGTATGCTCGGCCAATATGG 1258
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1498 TCTGAAACGTAATGTCACCATGTTGGACATCACTAGCACCCGTATGCTCGGCCAATATGG 1557
Query 1259 TTTCCTTTCCAAGGTGTTTTCCACATTTGAAAAGTTGGGCATATCTGTGGATGTTGTTGC 1318
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 TTTCCTTGCCAAGGTGTTTTCCACATTTGAAAAGTTGGGCATATCTGTGGATGTTGTTGC 1617
Query 1319 AACCAGCGAAGTTAGCATTTCCTTGACATTGGATCCTTCAAAGTTCTGCAGCAGAGAATT 1378
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct 1618 AACCAGCGAAGTTAGCATTTCTTTGACATTGGATCCTTCAAAGTTCTGTAGCAGAGAGTT 1677
Query 1379 AATTCAGCATGAGCTTGATCAAGTGGTTGAGGAACTTGAGAAGATTGCTATTGTAAATCT 1438
|||||| || ||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct 1678 AATTCAACACGAGCTTGATCAGGTGGTGGAGGAACTTGAGAAGATTGCTGTTGTAAATCT 1737
Query 1439 GCTTCGACACAGATCAATTATCTCCCTCATCGGAAATGTTCAAAGATCATCATTCATATT 1498
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1738 GCTTCGACACAGATCAATTATCTCTCTCATCGGAAATGTTCAGAGATCATCATTCATATT 1797
Query 1499 AGAGAAGGGCTTCCGAGTTCTTCGAACCAATGGGATTAATGTCCAGATGATCTCCCAAGG 1558
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1798 AGAGAAGGGCTTCCGAGTACTTCGAACCAATGGGATTAATGTCCAGATGATCTCCCAAGG 1857
Query 1559 TGCATCTAAGGTAAACATCTCACTGATAGTGAATGATGATGAGGCGGAGCATTGTGTGAA 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 TGCATCTAAGGTAAACATCTCACTGATAGTGAATGATGATGAGGCGGAGCATTGTGTGAA 1917
Query 1619 GGCTCTCCACTCGGCCTTCTTTGAGACAGGCACTTGTGAAGCAGTCTCAGAACGCCCGAC 1678
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1918 GGCTCTCCACTCGGCCTTCTTTGAGACAGACACTTGTGAAGCAGTCTCAGAATGCCCGAC 1977
Query 1679 TGGCTACATTGCTGCCTCTTCGCGAAACCTGTAGGTGCAACCTGCAAGGTCTGA 1732
|||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 1978 CGGCTACATCGCTGCCTCTTCGTGAAACCTCTAGGTGCAACCTGCAAGGTCTGA 2031
> AT5G14060.1 | Symbols: CARAB-AK-LYS | Aspartate kinase family
protein | chr5:4535401-4539193 FORWARD LENGTH=2229
Length=2229
Score = 1535 bits (831), Expect = 0.0
Identities = 1385/1648 (84%), Gaps = 56/1648 (3%)
Strand=Plus/Plus
Query 29 GGCTTCAATGCAGTTCTACGGAGTTCAAACACCAGAACTTGCCTTAAACTCAAA-AGCGA 87
||||||| ||||||| ||||||||| |||| |||| ||||| |||| ||||| || |
Sbjct 397 GGCTTCATTGCAGTTGTACGGAGTTAAAACTCCAGGGCTTGCTTTAAGTTCAAAGAG-GC 455
Query 88 TTGAGTTTGGC-TCAAA-GGGGC-TGAATTTCTCAGCACT-CG-TGTCCTC-TGCTCGTG 141
|||||||| || ||||| ||||| || ||| |||| | || || |||| | | |||
Sbjct 456 TTGAGTTT-GCTTCAAAGGGGGCATG--TTTTTCAG--TTACGTTGCCCTCAAG-TAGTG 509
Query 142 TAT-TCTCTAGAAACGTAGATCATGCTTGTAAGAACATCGCTCTGAGAGTTACTTGTGAA 200
| ||| |||| ||||||| ||| |||||| ||| || | | ||||||||| |||||||
Sbjct 510 -CTGTCTTTAGAGACGTAGAGCATTCTTGTAGGAATATAGGTTTGAGAGTTAGTTGTGAA 568
Query 201 GC-CGGAAGAGTGGAGCTGCTAGAAAGAAAAG-GCTCAGAGACTTTCAAGTT-AAACAGA 257
|| | |||||| || |||| ||||||||| || | ||||| | | | || || | ||
Sbjct 569 GCTC-TAAGAGTCGATTTGCTTCAAAGAAAAGAGC-CTGAGACGTGCGA-TTCAAGCGGA 625
Query 258 ACTGAG-AAAAAATTGACATGTGTAATGAAATTTGGTGGCTCATCAGTGGCATCAGCAGA 316
|||| | ||| | ||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct 626 ACTG-GCAAAGAGTTGACATGTGTAATGAAATTTGGCGGTTCATCAGTGGAATCAGCAGA 684
Query 317 AAGGATGAAACAAGTTGCCAAACTCATACTCAGCTTCCCAGACGAGAAGCCTGTTGTTGT 376
||||||||| |||||||||| || ||||||||||| ||||| |||| ||| || ||||
Sbjct 685 GAGGATGAAAGAAGTTGCCAATCTTATACTCAGCTTTCCAGATGAGAGGCCCGTCATTGT 744
Query 377 GCTATCAGCAATGGCAAAGACCACCAATAAGCTTTTGATGGCTGGAGAGAAGGCTGTTTG 436
|||||||||||||| |||||| || ||||||||||||| ||||||||||||||||| ||
Sbjct 745 GCTATCAGCAATGGGAAAGACGACTAATAAGCTTTTGAAGGCTGGAGAGAAGGCTG-TTA 803
Query 437 C-TGCGGTGTCACCAACGTCGACACTATTGAAGAGTTGAGCTATATAAAGGAACTCCATA 495
| ||||||||||| ||||| || | ||||||||| ||||||| ||||||||||||||||
Sbjct 804 CTTGCGGTGTCACTAACGTAGAAAGTATTGAAGAATTGAGCTTTATAAAGGAACTCCATT 863
Query 496 TAAGGACTGCTCATGAGCTTGGAGTGGAAACATCAGTTATTGCAGAACACTTAGAAGGAC 555
|||| ||||||||||||||||||||||||||| | ||||||| | ||||| |||||||||
Sbjct 864 TAAGAACTGCTCATGAGCTTGGAGTGGAAACAACGGTTATTGAAAAACACCTAGAAGGAC 923
Query 556 TGGAACAGCTTCTGAAAGGCATCGCAATGATGAAAGAATTAACTTTACGCTCAAGAGATT 615
| | |||||||| |||||||| ||||||||||||| |||| |||||| |||| || |
Sbjct 924 TACACCAGCTTCTCAAAGGCATATCAATGATGAAAGAGCTAACCTTACGCACAAGGGACT 983
Query 616 ACTTGGTTTCATTTGGAGAATGCATGTCCACAAGGCTATTT-GCTGCGTACT-TGAACAA 673
||||||||||||||||||| ||||||||||||||||| ||| ||||||| | | || ||
Sbjct 984 ACTTGGTTTCATTTGGAGAGTGCATGTCCACAAGGCT-TTTCTCTGCGTA-TCTCAATAA 1041
Query 674 AATTGGGCACAAAGCACGACAGTATGATGCATTTGAGATTGGGA-TTATCACCACAGATG 732
|||||| |||||||| || || |||||||||||||||| | ||| ||||||||||||| |
Sbjct 1042 AATTGGCCACAAAGCGCGTCAATATGATGCATTTGAGA-TCGGATTTATCACCACAGACG 1100
Query 733 ACTTCACTAATGCTGATATTCTTGAGGCAACATACCCGGCGGTTTCAAAAA-AGTTACTT 791
|||| |||||||||||||| ||||| ||||||||||| || || ||||||| | || ||
Sbjct 1101 ACTTTACTAATGCTGATATACTTGAAGCAACATACCCTGCCGTCTCAAAAACACTT-GTT 1159
Query 792 GGTGACTGGAGCAAGGAAAATGCAGTCCCCATTGTCACAGGCTTCCTTGGAAAGGGATGG 851
|| |||||||||||||||||||||||||| |||| || |||| ||| ||||||||||||
Sbjct 1160 GGCGACTGGAGCAAGGAAAATGCAGTCCCTGTTGTTACTGGCTACCTCGGAAAGGGATGG 1219
Query 852 AGATCTTGTGCTGTAACTACGCTTGGTAGAGGAGGTAGCGATTTGACTGCAACAACGATC 911
|| ||||||||| | |||||||| ||||| || || || |||||||| || ||||||||
Sbjct 1220 AGGTCTTGTGCTATCACTACGCTGGGTAGGGGTGGCAGTGATTTGACAGCTACAACGATT 1279
Query 912 GGGAAGGCTTTAGGTTTGCGGGAGATCCAGGTTTGGAAAGATGTGGATGGAGTTTTGACT 971
||||| || |||| ||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1280 GGGAAAGCGCTAGGACTGCGGGAAATTCAGGTTTGGAAAGATGTGGATGGAGTTTTGACT 1339
Query 972 TGTGATCCAAACATTTACTGC-GGAGCTCAACCTGTTCCACACTTGACATTTGATGAGGC 1030
|||||||| ||||| || | | ||||||||| ||||||| |||| || || ||||||||
Sbjct 1340 TGTGATCCTAACATATA-TCCTGGAGCTCAATCTGTTCCGTACTTAACGTTCGATGAGGC 1398
Query 1031 TGCTGAACTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTTTCCATGCGCCCAGCACG 1090
||||| ||||||||||||||||||||||||||||||||||| || ||| | |||||| |
Sbjct 1399 AGCTGAGCTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTGTCTATGAGGCCAGCAAG 1458
Query 1091 AGAAGGTAACATTCCTGTAAGGGTTAAGAACTCTTACAATCCCACTGCTCCAGGAACTGT 1150
||| || |||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1459 AGATGGCGACATTCCTGTGAGGGTTAAGAACTCGTACAACCCCACTGCTCCAGGAACTGT 1518
Query 1151 CATCACCAGATCAAGAGACATGAGCAAGGCTGTATTGACCAGCATCGTTCTGAAACGTAA 1210
|||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||
Sbjct 1519 CATCACCAGATCAAGAGACATGAGTAAGGCTGTGCTAACCAGCATTGTTCTGAAACGTAA 1578
Query 1211 TGTTACCATGTTAGACATCA-CTAGCACCCGTATGCTCGGCCAATATGGTTTCCTTTCCA 1269
||| |||||||| ||||| | | |||||||||||||| |||||||||||||||||| |||
Sbjct 1579 TGTGACCATGTTGGACAT-AGCAAGCACCCGTATGCTTGGCCAATATGGTTTCCTTGCCA 1637
Query 1270 AGGTGTTTTCCACATTTGAAAAGTTGGGCATATCTGTGGATGTTGTTGCAACCAGCGAAG 1329
|||||||| ||||||||||| | || || ||||| || |||||||| ||||| || ||||
Sbjct 1638 AGGTGTTTACCACATTTGAAGATTTAGGTATATCGGTTGATGTTGTGGCAACAAGTGAAG 1697
Query 1330 TTAGCATTTCCTTGACATTGGATCCTTCAAAGTTCTGCAGCAGAGAATTAATTCAGC-A- 1387
|||| || || |||||||||||||| ||||| |||| | ||||| |||||||||| |
Sbjct 1698 TTAGTATATCATTGACATTGGATCCAGCAAAGCTCTGGGGTAGAGAGTTAATTCAGCGAG 1757
Query 1388 TGA--G--CTTGATCAAGT-GGTTGAGGAACTTGAGAAGATTGCTATTGT-AAATCTGCT 1441
| | | || ||| || | ||| || || || |||||||||||| |||| ||| || ||
Sbjct 1758 TAAATGAACTGGAT-AATTTGGTGGAAGAGCTAGAGAAGATTGCTGTTGTGAAA-CTACT 1815
Query 1442 TCGACACAGATCAATTATCTCCCTCATCGGAAATGTTCA-AAGATCATCATTCATATTAG 1500
|| || ||||||||| ||||| ||||| ||||||||||| || ||| ||| |||||||||
Sbjct 1816 TCAACGCAGATCAATCATCTCTCTCATAGGAAATGTTCAGAA-ATCCTCACTCATATTAG 1874
Query 1501 AGAAGG-GCTTCCGAGT-TCTTCGAACCAATGGGATT-AATGTCCAGATGATCTCCCAAG 1557
|||||| | |||| ||| | || ||| |||||| | | ||||| ||||||||||| || |
Sbjct 1875 AGAAGGTG-TTCCAAGTAT-TTAGAAGCAATGG-AGTGAATGTGCAGATGATCTCGCAGG 1931
Query 1558 GTGCATCTAAGGTAAACATCTCACTGATAGTGAATGATGATGAGGCGGAGCATTGTGTGA 1617
||||||||||||||||||||||| |||||||||||||||| ||||| ||||| |||||||
Sbjct 1932 GTGCATCTAAGGTAAACATCTCATTGATAGTGAATGATGAAGAGGCAGAGCAATGTGTGA 1991
Query 1618 AGGCTCTCCACTCGGCCTTCTTTGAGAC 1645
|||||||||||| ||||||||||||||
Sbjct 1992 GGGCTCTCCACTCCGCCTTCTTTGAGAC 2019
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85642129770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5