BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927566
Length=1538
Score E
Sequences producing significant alignments: (Bits) Value
AT3G01900.1 | Symbols: CYP94B2 | cytochrome P450, family 94, su... 2333 0.0
AT5G63450.1 | Symbols: CYP94B1 | cytochrome P450, family 94, su... 106 7e-22
> AT3G01900.1 | Symbols: CYP94B2 | cytochrome P450, family 94,
subfamily B, polypeptide 2 | chr3:312359-313849 REVERSE LENGTH=1491
Length=1491
Score = 2333 bits (1263), Expect = 0.0
Identities = 1424/1501 (95%), Gaps = 14/1501 (1%)
Strand=Plus/Plus
Query 21 ATGGAAGCTTCAACTCTCATTCTTCTTCTTATCCTTGTGCTGCTGCTTGTCTCTGCGGGA 80
||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1 ATGGAAGCTTCAACTTTTATTCTTCTTCTTGTCCTTGTGCTGTTGCTTGTCTCTGCGGGA 60
Query 81 AAACATGTTGTGATATATCCTTGCCGCAACTCTATACCGAAAACATACCCGGTTATCGGA 140
||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 61 AAACA---TGTGATATATTCTTGCCGCAACTCTACACCGAAAACATACCCGGTTATCGGA 117
Query 141 TGCTTAATTTCATTCTATACCAACCGCAACCGGTTACTGGATTGGTATACAGAGCTCCTA 200
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 118 TGCTTAATTTCATTCTATACCAACCGAAACCGGTTACTGGATTGGTATACAGAGCTCCTA 177
Query 201 ACCGAATCCACGAGTCGGACGGTAGTCATTCGCCGCTTAGCTGCCCGGAGAACCGTAGTG 260
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 178 ACCGAATCCCCGAGTCGGACGGTAGTCATTCGCCGCTTAGCTGCACGGAGAACCGTAGTG 237
Query 261 ACGGCGAACCCCTCGAACGTGGAGTATATCCTCAAAACAAACTTCGACAACTATCCCAAA 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 ACGGCGAACCCCTCGAACGTGGAGTATATCCTCAAAACAAACTTCGACAACTATCCCAAA 297
Query 321 GGCAAACCCTTTACGGAGATCCTCGGAGACTTTCTCGGCAACGGAATCTTTAACGTTGAC 380
|||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct 298 GGCAAACCTTTTACGGAGATCCTCGGAGATTTTCTCGGCAACGGGATCTTCAACGTTGAC 357
Query 381 GGAAACCTCTGGTTAAAGCAGAGGAGACTTGCTACTCACGATTTCACCCCAAAGTCGCTG 440
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 358 GGAAACCTCTGGTTAAAGCAGAGGAGACTTGCTACACACGACTTCACCCCAAAGTCGCTG 417
Query 441 AGAGAATACGTCACCGTTTTGAGAAACGAGGTGGAGAAGGAGCTCGTAGCGTTTCTAAAC 500
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 418 AGAGAATACGTCACCGTTTTGAGAAACGAGGTGGAGAAGGAGCTCTTAGCGTTTCTAAAC 477
Query 501 GCAGCTGCGGAAGATTCACAACCCTTCGATCTTCAGGAACTTCTCCGTAGATTCACTTTC 560
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 478 GCAGCTGCGGAAGATTCACAACCCTTCGATCTTCAGGAGCTTCTCCGTAGATTCACTTTC 537
Query 561 AATATTGTATGCATTGTTTTCCTCGGGATCGACCGTTGCTCTTTAAACCCGTCGTCGCCT 620
|||||||| ||||||||||||||||||||||| |||||| |||||||||| || || ||
Sbjct 538 AATATTGTTTGCATTGTTTTCCTCGGGATCGATCGTTGCACTTTAAACCCTTCCTCCCCC 597
Query 621 GTTTCTGAGTTCGACCGAGCGTTCCACACAGCTTCTGCGGTTAGCGCTGGACGCGGTTCC 680
||||||||||||||| |||| || || |||||||||||||| ||||||||||||||||||
Sbjct 598 GTTTCTGAGTTCGACAGAGCCTTTCAGACAGCTTCTGCGGTCAGCGCTGGACGCGGTTCC 657
Query 681 GCACCGCTGTCTTTTGTGTGGAAGTTTAAGAGACTGGTCGGTTTTGGATCTGAAAAAGAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 658 GCACCGCTGTCTTTTGTGTGGAAGTTTAAGAGACTGGTCGGTTTTGGATCTGAGAAAGAG 717
Query 741 CTCAGAAACGCTATCGGACAAGTTCATAGCTGCGTCGATGAGATCATTCGGGAGAAGAAG 800
|||||||| || ||||| |||| |||| |||||||||||||||||||||||| ||||||
Sbjct 718 CTCAGAAAAGCCGTCGGAGAAGTCCATAACTGCGTCGATGAGATCATTCGGGATAAGAAG 777
Query 801 AGGAGGCCTGCCAACCAAGACTTTCTGTCGCGGTTGATCGTCGCCGGAGAAAGCGACGAG 860
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 778 AGGAAGCCTGCCAACCAAGACTTTCTCTCGCGGTTGATCGTCGCCGGAGAAAGCGACGAG 837
Query 861 ACAGTGAGGGATATGGTAATAAGTATCATAATGGCCGGGAGGGATACCACATCGGCGGTA 920
|| ||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 838 ACGGTGAGAGATATGGTAATAAGTATCATAATGGCGGGGAGGGACACCACGTCGGCGGTA 897
Query 921 GCCACACGGCTGTTTTGGTTGATCACCGGTCACAAGGAAACCGAGCACGATCTGGTTAGT 980
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 898 GCCACACGGCTGTTTTGGTTGATCACCGGTCACGAGGAAACCGAGCACGATCTGGTTAGT 957
Query 981 GAAATCCGATCGGT-TA--AGGAGACAACCGGGGGTTTTGATTACGAATCATTGAAAAAA 1037
|||||||||||||| | |||||| ||| |||||||||||||||||||||||||| |||
Sbjct 958 GAAATCCGATCGGTCAAGGAGGAGATAACGGGGGGTTTTGATTACGAATCATTGAAGAAA 1017
Query 1038 CTGAGTTTGTTGAGAGCGTGTTTGTGTGAAGTGATGCGATTGTATCCTCCGGTGCCGTGG 1097
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CTGAGTTTGTTGAAAGCGTGTTTGTGTGAAGTGATGCGATTGTATCCTCCGGTGCCGTGG 1077
Query 1098 GACTCCAAACACGCCTTAACCGATGACCGGTTACCAGACGGTACGTTGGTGCGTGCAGGA 1157
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1078 GACTCCAAACACGCCTTAACCGATGACCGGTTACCAGACGGTACGTTGGTGCGTGCCGGA 1137
Query 1158 GACCGGGTAACGTATTTTCCATATGGTATGGGGAGAATGGAGGAGC-ATTGGGGGGAAGA 1216
||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||
Sbjct 1138 GACCGGGTAACGTATTTTCCATATGGTATGGGGAGAATGGAAGAGCTAT-GGGGGGAAGA 1196
Query 1217 TTGGGATGAGTTTAAACCAAACCGGTGGGTTGATGAGTCGTCCTATGATAAAACCTGCTG 1276
||||||||||||||||||||||||||||| ||| | || | |||||||||||||||||
Sbjct 1197 TTGGGATGAGTTTAAACCAAACCGGTGGGCTGA-G--TC-T--TATGATAAAACCTGCTG 1250
Query 1277 CAGAGTTTTGAAAAAGGTGAATCCGTTCAAGTTTCCGGTTTTCCAAGCCGGCCCAAGGGT 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 CAGAGTTTTGAAAAAGGTGAATCCGTTCAAGTTTCCGGTTTTCCAAGCCGGCCCAAGGGT 1310
Query 1337 TTGTCTCGGAGAAGAGATGGCGTACGTGCAGATGAAGTACGTTGTGGCTTCCATACTTGA 1396
|||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1311 TTGTCTTGGGGAAGAGATGGCGTACGTGCAGATGAAGTATATTGTGGCTTCCATACTTGA 1370
Query 1397 CCGGTTTGAGATCGAACCGATCCCTACGGATAAACCGGATTTTGTGGCGATGCTCACAGC 1456
|||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct 1371 CCGGTTTGAGATTGAACCGATCCCTACGGATAAACCGGATTTTGTGCCAATGCTCACGGC 1430
Query 1457 TCACATGGCTGGTGGGATGCAAGTCCGCGTTCGTCGGAGAGATCCTTCTCTTTCTCCTTG 1516
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1431 TCACATGGCTGGTGGGATGCAAGTCCGCGTTCATCGGAGAGATCCTTCTCTTTCCCCTTG 1490
Query 1517 A 1517
|
Sbjct 1491 A 1491
> AT5G63450.1 | Symbols: CYP94B1 | cytochrome P450, family 94,
subfamily B, polypeptide 1 | chr5:25408895-25410573 REVERSE
LENGTH=1679
Length=1679
Score = 106 bits (57), Expect = 7e-22
Identities = 139/176 (79%), Gaps = 15/176 (9%)
Strand=Plus/Plus
Query 1170 TATTTTCCATATGGTATGGGGAGAATGGAGGAGCAT-TGGGGGGAAGATTGGGATGAGTT 1228
||||| || || |||||||| || |||||| || | ||||| |||||||||| |||||
Sbjct 1237 TATTTCCCTTACGGTATGGGAAGGATGGAGAAG-GTGTGGGGTAAAGATTGGGACGAGTT 1295
Query 1229 TAAACCAAACCGGTGGGTTGATG-AG--TCGTCCTATGATA-AAACCTGCTGCAGAGTTT 1284
|||||||||||||||| |||| | || || || | || ||| | | | ||||
Sbjct 1296 TAAACCAAACCGGTGGTTTGAGGAAGAACCGAGTTACGGTACAAA---AC--C-G-GTTT 1348
Query 1285 TGAAAAAG-GTGAATCCGTTCAAGTTTCCGGTTTTCCAAGCCGGCCCAAGGGTTTG 1339
|| ||||| |||| | |||||||||||||||||||||||||||| |||||||||||
Sbjct 1349 TG-AAAAGTGTGAGTTCGTTCAAGTTTCCGGTTTTCCAAGCCGGACCAAGGGTTTG 1403
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75903224040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5