BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927569
Length=1793
Score E
Sequences producing significant alignments: (Bits) Value
AT3G01870.1 | Symbols: | Plant protein of unknown function (DU... 2752 0.0
AT3G01880.1 | Symbols: | Plant protein of unknown function (DU... 1129 0.0
> AT3G01870.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr3:305131-307225 FORWARD LENGTH=2095
Length=2095
Score = 2752 bits (1490), Expect = 0.0
Identities = 1695/1793 (95%), Gaps = 18/1793 (1%)
Strand=Plus/Plus
Query 2 TTAACTAAA-AAGAGAGTAGAATGCAATCATCTATTGGAAAAGCCTTTCAACTTTTCTGT 60
||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 126 TTAACTAAAGAA-AGAGTAGAATGCATTCATCTATTGGAAAAGCCTTTGAACTTTTCTGT 184
Query 61 TTTCTTGTTATTTTAATTGTTAACCATGTGTGTTGGATCCAAGCACAAGGCAACTCCGAT 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 185 TTTCTTGTTATTTTAATTGTTAACCATGTGTGTTGGATCCAGGCACAAGGCAACTCCGAT 244
Query 121 GTGAA-TC-CCA-CAGTGAGCAGATCTGCGGATCCATTTCTTT-TGTCTACAAGCTTACC 176
||||| || || |||||||||||||| ||||| ||||||||| | ||||||||||||||
Sbjct 245 GTGAATTCTACAGCAGTGAGCAGATCTACGGATACATTTCTTTCT-TCTACAAGCTTACC 303
Query 177 TGTGGAGACGGCCTTCACGTTTCCATCTGCTTTACCTGTTATCCCTTCGGGTGGTGGAAA 236
||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 304 TGTGGAGACAGCCTTCACGTTTCCATCGGCTTTACCTGTCATCCCTTCGGGTGGTGGAAA 363
Query 237 TTTTGGGAAAGGAAGGATAGATCTGGGAGGTCTTGAGGTGATCCAAGTCTCCATCTCAAC 296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 364 TTTTGGGAAAGGAAGGATAGATCTCGGAGGTCTTGAGGTGATCCAAGTCTCCATCTCAAC 423
Query 297 CTCAACATCACAGAGAGTATGGAGGACATACGAGGGAGGGCCCAACAGCATGGGACTCAC 356
|||||||||||| |||||||||||||||||||||||||| ||| ||| |||||| ||| |
Sbjct 424 CTCAACATCACAAAGAGTATGGAGGACATACGAGGGAGGTCCCGACAACATGGGGCTCTC 483
Query 357 TATCTTCCAACCTATCAATCTTCCTCCCAGCTTTTTCACTCTTGGCTTCTATGCGCAACC 416
|||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct 484 TATCTTCCAACCAATCAATCTTCCTCCCAGCTTCTCCACTCTTGGCTTCTATGGGCAACC 543
Query 417 CAACAACCGTCTGCTTTTCGGCTGGGTTCTTGCTGCAAGAGACGTCTCTGGAAATAGCTT 476
||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 544 CAACAACCGCCTGCTTTTTGGGTGGGTTCTTGCTGCAAGAGACGTGTCTGGAAATAGCTT 603
Query 477 GAGGCCACCCGTTGGCTACGTTGAAGTCATAAACACTACATCAATGAATATCAACCAAGA 536
|||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||
Sbjct 604 GAGGCCACCCGTTGACTACATTCAAGTCATAAACACTACATCAATGAATATCAACCAAGA 663
Query 537 CGGGGCTGCTTATTTTTGGCAGCCCCTATGTCCCGATGGGTATCAAGCGGTTGGTCTATA 596
|||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 664 AGGGGCTGCTTTTTTTTGGCAGCCCCTATGTCCCAATGGATATCAAGCGGTTGGTCTATA 723
Query 597 TGTCACTACTTCTCCTCTGAAGCCCTCGTTAAGTCAAGAATCCATAAGCTGCGTTCGATC 656
|||||||||||||||| | ||||| || |||||||||||||| |||||||||||||||||
Sbjct 724 TGTCACTACTTCTCCTATAAAGCCATCTTTAAGTCAAGAATCTATAAGCTGCGTTCGATC 783
Query 657 CGATCTTACGGAACAGAGTGAAACGGATACATGGGTTTGGGGGACA-AACGAAATGACTC 715
|||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||
Sbjct 784 CGATCTTACGGAACAGAGTGAAACCGATACATGGGTTTGGGGGACAGAA-GAAATGACTC 842
Query 716 TTTCTAGTTTGAGACCGGCCAACAGAGGAACAGAAGCAACAGGTGTGCACACAGGGACAT 775
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 843 TGTCTAGTTTGAGACCGGCCAACAGAGGAACAGAAGCAACAGGTGTACACACAGGGACAT 902
Query 776 TCAGCTGCCAGCCACT-AAGCGTCCCTCCCCCTCCTCCTCCTCTGTTCTGCTTGAAAAAC 834
|||||||||||||| | || | ||||| ||||| ||||||||||| ||||||||||||
Sbjct 903 TCAGCTGCCAGCCATTGAA-CATCCCT---CCTCCCCCTCCTCTGTTTTGCTTGAAAAAC 958
Query 835 ACAAAATTTGACTTGTCTAGCATGCCAAGCCATAACCAAACTAGCGTTTTGTTTCAATCG 894
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 959 ACAAAATTTGACTTGTCTAGCATGCCAAGCCATAATCAAACTACCGTTTTGTTTCAATCG 1018
Query 895 TATTCTCCTTGGATATATTTGCATCCAGATGAAGATTTTCTTCCTTCCTCTGTCAATTGG 954
||||||||||||||||||||||||||||||||||||||| || ||||||||||| | |||
Sbjct 1019 TATTCTCCTTGGATATATTTGCATCCAGATGAAGATTTTATTTCTTCCTCTGTCGACTGG 1078
Query 955 tttttttCTAATGGTGCCCTGTTATTCCAGAGAGGCAACGAATCCAACCCCGTCCCTGTG 1014
||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1079 TTTTTCTCCAATGGTGCCCTGTTATTCCAGAAAGGCAACGAATCCAACCCCGTCCCTGTG 1138
Query 1015 CAGCCGGACGGTTCAAACCTTCCGCAAGGCGGTTCGGATGATGGTTTATTCTGGTTAGAC 1074
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1139 CAACCGGACGGTTCAAACCTTCCGCAGGGCGGTTCGGATGATGGTTTATTCTGGTTAGAC 1198
Query 1075 TATCCGG-TGGATAAGAACGCAAAGGAATGGGTTAAGAGGGGAGACTTAGGAAACACGAA 1133
||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1199 TATCCGGCT-GATAAGAACGCAAAGGAATGGGTTAAGAGGGGAGACTTAGGACACACGAA 1257
Query 1134 AGTGTATCTACACATCAAACCAATGTTTGGAGGCACTTTCACTGACATCGTCGTGTGGAT 1193
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1258 AGTGTATCTACACATCAAACCAATGTTTGGAGGCACTTTCACTGACATTGTCGTGTGGAT 1317
Query 1194 ATTCTACCCTTTCAACGGCAACGCCCGCCTCAAGTTTTTATTCATCAAGAGCCTGTCACT 1253
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1318 ATTCTACCCTTTCAACGGTAACGCCCGCCTCAAGTTTTTATTCTTCAAGAGCCTGTCGCT 1377
Query 1254 GGGGGATATTGGCGAACATATTGGAGACTGGGAACATGTTACGCTGCGCATCAGCAACTT 1313
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1378 GGGGGATATCGGCGAACATATTGGAGACTGGGAACATGTTACGTTGCGCATCAGCAACTT 1437
Query 1314 CAACGGAGAGTTATGGCGCGCATACTTCTCTGAGCACAGTGGGGGAACTTTAGTGGAGGC 1373
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 1438 CAACGGAGAGTTATGGCGAGCATACTTCTCTGAGCACAGTGGGGGAACTCTAGTGGAGGC 1497
Query 1374 ATGCGATCTAGAGTTTCAAGGTGGAAACAAACCTGTGAGCTACTCGTCTCTTCACGGACA 1433
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1498 ATGCGATCTTGAGTTTCAAGGTGGAAACAAACTTGTGAGCTACTCGTCTCTTCACGGACA 1557
Query 1434 CGCAATGTTCTCAAGACCAGGACTTGTGTTGCAAGGCGATGACGGAAACGGCATAAGGAA 1493
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 CGCAATGTTTTCAAAACCAGGACTTGTGTTGCAAGGCGATGACGGAAACGGCATAAGGAA 1617
Query 1494 CGATATGGCAAGAAGTGACAAATTCTTTGACGCAGGTGTTGCTTATGAGCTGGTTGCAGG 1553
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 CGACATGGCAAGAAGTAACAAATTCTTTGACGCAGGTGTTGCTTATGAGCTGGTTGCAGG 1677
Query 1554 ACCGGGCATTGAGGAGCCACCGTGGCTCAACTATTTTAGGAAATGGGGACCATTTGTCCG 1613
|||||| ||| ||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1678 ACCGGGGATTCAGGAGCCACCGTGGCTCAACTATTTCAGGAAATGGGGACCACTTGTCCC 1737
Query 1614 ACATGACATTCAGAAGAACCTTGATGGTATCGCAAAGTCATTGCCGGGACTTTTGCGGAA 1673
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1738 ACATGACATTCAAAAGAACCTTGAAGGTATCGCAAAGTCATTGCCGGGACTTTTGCGGAA 1797
Query 1674 AAAATTCAGAAAAT-TTATTAACAAAATGCCTCGTGAAGTGCTTGAAGAAGATGGTCCCA 1732
||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1798 AAAATTCAG-AAATCTGATTAACAAAATCCCTCGTGAAGTGCTTGAAGAAGATGGTCCCA 1856
Query 1733 CTGGACCCAAAGTCAAAAGGTCTTGGACCGCTGATGACTAAGTTTTCATTCAT 1785
|||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1857 CTGGACCCAAAGTCAAAAGGTCTTGGACCGGTGATGACTAATTTTTCATTCAT 1909
> AT3G01880.1 | Symbols: | Plant protein of unknown function (DUF946)
| chr3:307782-309560 FORWARD LENGTH=1779
Length=1779
Score = 1129 bits (611), Expect = 0.0
Identities = 1159/1422 (82%), Gaps = 43/1422 (3%)
Strand=Plus/Plus
Query 206 CTTTACCT-GTTATCCCTTCGGGTGGTGGAAATTTTGGGAAAGGAAGGATAGATCTGGGA 264
|||| ||| | ||| ||||| | ||||||||||||||| ||| |||| || ||| |||||
Sbjct 200 CTTTGCCTAG-TATGCCTTCCGATGGTGGAAATTTTGGCAAAAGAAGCATTGATATGGGA 258
Query 265 GGTCTTGAGGTGATC-CAAGTCTCCATCTCAACCTCAACATCACAGAGAGTATGGAGGAC 323
||||||||||| | | ||| |||| ||||||| |||||||||||| ||||| ||||| ||
Sbjct 259 GGTCTTGAGGTTA-CTCAAATCTCTATCTCAAACTCAACATCACACAGAGTGTGGAGAAC 317
Query 324 ATACGAGGGAGGGCCCAACAGCATGGGACTCA-CTATCTTCCAACCTATC-AATCTTCCT 381
|| || |||||||| | | ||||||| ||| | ||||| |||| | | | | |||||
Sbjct 318 TTATGAAGGAGGGCCGGATAACATGGGAGTCAGC-ATCTTTGAACC-AACTACTATTCCT 375
Query 382 CCCAGCTTT-TTCACTCTTGGCTTCTATGCGCAACCCAACAACCGTCTGCTTTTCGGCTG 440
| | ||| |||| |||||||||||||| ||||| |||||||| | |||||| || ||
Sbjct 376 CGTA-ATTTCTTCAAACTTGGCTTCTATGCACAACCTAACAACCGACAGCTTTTTGGTTG 434
Query 441 GGTTCTTGCTGCAAGAGACGTCTCTGGAAATAGCTTGAGGCCACCCGTTGGCTACGTTGA 500
| |||||| ||||| |||||| || |||| || || || ||||| || | |||| |||
Sbjct 435 GATTCTTGTTGCAAAAGACGTATCGGGAAGTAATTTAAGACCACCAGTCGACTACACTGA 494
Query 501 AGTCATAAACACTACATCAATGAATATCAACCAAGACGGGG-CTGCTTATTTTTGGCAGC 559
||| |||||||||| || || |||||| ||||| |||| |||| |||||||||||||
Sbjct 495 AGTTGGAAACACTACAACATTGCTTATCAAACAAGA-GGGGCCTGCATATTTTTGGCAGC 553
Query 560 CCCTATGTCCCGATGGGTATCAAGCGGTTGGTCTATATGTCACTACTTCTCCTCTGAAGC 619
|||||||||| |||| ||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 554 CCCTATGTCCTAATGGATATCATGCGGTTGGTCTATATGTCACTACTTCTCCTATGAAGC 613
Query 620 CCTCGTTAAGTCAAGAATCC-ATAAGCTGCGTTCGATCCGATCTTACGGAACAGAGTGAA 678
|||| || | ||| ||| | |||||||| |||||||| ||||| || ||||||||||||
Sbjct 614 CCTCTTTGGGACAA-AATTCTATAAGCTGTGTTCGATCTGATCTCACAGAACAGAGTGAA 672
Query 679 ACGGATACATGGGTTTGGGGGACAAACGAAATGACTCTTTCTAGTTTGAGACCGGCCAAC 738
| ||||||||||| ||| ||| ||| || |||||| ||||||||||||||||||||| |
Sbjct 673 GCCGATACATGGGTATGGAGGATAAAAGATATGACTATTTCTAGTTTGAGACCGGCCA-C 731
Query 739 -AGAGGAACAGAAGCAACAGGTGTGCACACAGGGACATTCAGCTGCCAGCCACTAAGCGT 797
|||||| ||| || ||||||||| ||||||||||||||||||| | | ||||| | |
Sbjct 732 GAGAGGAGTAGAGGCGACAGGTGTGTTCACAGGGACATTCAGCTGCAAACAACTAAACTT 791
Query 798 CCCTCCCCCTCCTCCTCCTCTGTTCTGCTTGAAAAACACAAAATTTGACTTGTCTAGCAT 857
| ||| | ||| |||||| | |||||||| ||||| ||||||||||||||||| |||||
Sbjct 792 TCTTCCTCATCCCCCTCCTTTATTCTGCTTAAAAAATACAAAATTTGACTTGTCAAGCAT 851
Query 858 GCCAAGCCATAACCAAACTAGCGTTTTGTTTCAATCGTATTCTCCTTGGATATATTTGCA 917
||||||| | || |||||||| ||||||||| || |||||||||||||||||||||| ||
Sbjct 852 GCCAAGCGAAAATCAAACTAGAGTTTTGTTTAAAACGTATTCTCCTTGGATATATTTACA 911
Query 918 TCCAGATGAAGATTTTCTTCCTTCCTCTGTCAATTGGtttttttCTAATGGTGCCCTGTT 977
||| | |||||||| ||||||||||||||||||||| |||| |||| |||||| || |
Sbjct 912 CCCAAAAGAAGATTTCCTTCCTTCCTCTGTCAATTGGGTTTTCGCTAACGGTGCCTTGCT 971
Query 978 ATTCCAGAGAGGCAACGAATCCAACCCCGTCCCTG-TGCAGCCGGACGGTTCAAACCTTC 1036
| | ||| ||| |||||||||| ||| ||||| | | || || | |||||||||||||
Sbjct 972 ACACAAGAAAGGAAACGAATCCATCCCGGTCCC-GATACATCCAAATGGTTCAAACCTTC 1030
Query 1037 CGCAAGGCGGTTCGGA-TGATGGTTTATTCTGGTTAGACTATCCGGTGGATAAGAACGCA 1095
| ||||| |||| | | ||||| || || |||||||| |||| || ||||| || ||
Sbjct 1031 CACAAGGAGGTT-GCAATGATGACTTGTTTTGGTTAGATTATCTAGTCGATAAAAAGGCT 1089
Query 1096 A-AGGAATGGGTTAAGAGGGGAGACTTAG-GAAACACGAAAGTGTATCTACACATCAAAC 1153
| || || || ||||||||||||| |||| || ||| || |||||||||||||||||||
Sbjct 1090 AGAGAAAAGG-TTAAGAGGGGAGATTTAGAGAG-CACTAAGGTGTATCTACACATCAAAC 1147
Query 1154 CAATGTTTGGAGGC-ACTTTCACTGACATCGTCGTGTGGATATTCTA-CCCTTTCAACGG 1211
|||||||||||| | |||||||| || || || || ||| |||||| |||| | |||||
Sbjct 1148 CAATGTTTGGAG-CTACTTTCACAGATATTGTAGTATGGCTATTCTTTCCCTAT-AACGG 1205
Query 1212 CAACGCCCGCCTCAAGTTTTTATTCATCAAGAGCCTGTCACTGGGGGATATTGGCGAACA 1271
|| || | | || ||||| || |||||||||||||| || || |||||||||| ||
Sbjct 1206 AAATGCACATTTAAAATTTTTGTTTATCAAGAGCCTGTCGCTAGGAAATATTGGCGAGCA 1265
Query 1272 TATTGGAGACTGGGAACATGTTACGCTGCGCATCAGCAACTTCAACGGAGAGTTATGGCG 1331
| |||||||||||||||| ||||| | ||||||||||||||||| || |||||||||||
Sbjct 1266 TGTTGGAGACTGGGAACACGTTACATTACGCATCAGCAACTTCAATGGTGAGTTATGGCG 1325
Query 1332 CGCATACTTCTCTGAGCACAGTGGGGGAACTTTAGTGGAGGCATGCGATCTAGAGTT--T 1389
| ||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| |
Sbjct 1326 TGTTTACTTTTCTGAACACAGTGGAGGAACTTTAGTGGATGCATGCGATCTAGAGTTCAT 1385
Query 1390 -CAAGGTGGAAACAAACCTGTGAGC-TACTCGTCTCTTCACGGACACGCAATGTTCTC-A 1446
||||||||||||||||| || || || ||||||||||| || || ||||||||||| |
Sbjct 1386 GCAAGGTGGAAACAAACCAGT-AGTATATTCGTCTCTTCATGGGCATGCAATGTTCTCCA 1444
Query 1447 AGACCAGGACTTGTGTTGCAAGGCGATGACGG-AAACG-GCA-TAAGGAACGATATGGCA 1503
| ||| ||| | ||||||||||| | | ||| ||| | | | |||||||||| ||||||
Sbjct 1445 A-ACCTGGAGTCGTGTTGCAAGGTG--G-CGGCAAAAGTGGAATAAGGAACGACATGGCA 1500
Query 1504 AGAAGTGACAAATTCTTTGACGCAGGTGTTGCTTATGA-GCTGGTTGCAGGACCGGGCAT 1562
||||| ||||||| ||||||||||||| ||| ||||| | || |||| ||||| ||| |
Sbjct 1501 AGAAGCGACAAATGCTTTGACGCAGGTATTGGATATGAAG-TGATTGCGGGACCTGGCGT 1559
Query 1563 TGAGGAGCCACCGTGGCTCAACTATTTTAGGAAATGGGGACC 1604
| |||||||||||||| || ||||||||||||||||||||
Sbjct 1560 GGTTGAGCCACCGTGGCTGAATTATTTTAGGAAATGGGGACC 1601
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88704363015
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5