BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927678 Length=1486 Score E Sequences producing significant alignments: (Bits) Value AT5G15490.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 1622 0.0 AT3G29360.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 1147 0.0 AT3G01010.1 | Symbols: | UDP-glucose/GDP-mannose dehydrogenase... 662 0.0 > AT5G15490.1 | Symbols: | UDP-glucose 6-dehydrogenase family protein | chr5:5027639-5030194 REVERSE LENGTH=1781 Length=1781 Score = 1622 bits (878), Expect = 0.0 Identities = 1260/1448 (87%), Gaps = 12/1448 (1%) Strand=Plus/Plus Query 20 aaaaTGGTGAAGATCTGCTGCATTGGAGCTGGTTATGTTGGTGGTCCAACTATGGCTGTC 79 |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 103 AAAATGGTGAAGATTTGCTGCATTGGAGCTGGATATGTTGGTGGTCCAACCATGGCTGTC 162 Query 80 ATTGCTTTGAAA-TGTCCATCTGTTGAAGTTGCTGTTGTTGATATCTCTGTTCCACGGAT 138 |||||| | ||| ||||||||||||||||| |||||||||||||||||||| ||| |||| Sbjct 163 ATTGCTCT-AAAGTGTCCATCTGTTGAAGTAGCTGTTGTTGATATCTCTGTGCCAAGGAT 221 Query 139 CACTGCTTGGAACAGTGACCAGCTT-CCTATCTATGAGCCGGGCCTCGATGATGTTGTTA 197 || ||| ||||||||||| ||| || || ||||||||||| || || |||||||| |||| Sbjct 222 CAATGCCTGGAACAGTGATCAG-TTACCGATCTATGAGCCTGGTCTTGATGATGTCGTTA 280 Query 198 AGCAATGCCGTGGCAAGAACCTCTTCTTTAGTACTGATGTGGAGAAACACGTGAGAGAAG 257 |||| |||||||| ||||| |||||||| || || ||||| |||||||| |||||||| | Sbjct 281 AGCAGTGCCGTGGAAAGAATCTCTTCTTCAGCACCGATGTTGAGAAACATGTGAGAGAGG 340 Query 258 CTGATATCGTCTTTGTCTCTGTGAATACCCCGACTAAGACTCGTGGTCTTGGAGCTGGTA 317 |||| || || ||||| ||||| || ||||| |||||||| ||||||||||||||||| | Sbjct 341 CTGACATTGTTTTTGTGTCTGTCAACACCCCTACTAAGACCCGTGGTCTTGGAGCTGGCA 400 Query 318 AAGCTGCTGATTTGACTTACTGGGAAAGCGCAGCTCGGATGATTGCTGATGTTTCGGTTT 377 ||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||||||||||| Sbjct 401 AAGCTGCGGATTTGACTTACTGGGAGAGCGCTGCTCGTATGATTGCCGATGTTTCGGTTT 460 Query 378 CTGACAAGATCGTTGTCGAGAAATCAACTGTCCCTGTCAAAACCGCTGAAGCTATTGAGA 437 | |||||||| ||||| |||||||||||||| |||||||||||||| || || ||||||| Sbjct 461 CCGACAAGATTGTTGTTGAGAAATCAACTGTTCCTGTCAAAACCGCAGAGGCAATTGAGA 520 Query 438 AGATTCTGATGCACAACAGTAAAGGAATCAAGTTCCAGATTCTTTCCAACCCTGAGTTCC 497 ||||||| | |||||||| ||||||||||| ||||||||||| || ||||||||||||| Sbjct 521 AGATTCTTACACACAACAGCAAAGGAATCAAATTCCAGATTCTGTCAAACCCTGAGTTCC 580 Query 498 TTGCTGAAGGAACCGCTATTGAAGATCTTTTCTAT-CCTGACCGTGTTCTCATCGGTGGT 556 ||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||| Sbjct 581 TTGCTGAAGGAACCGCTATTGAAGACCTTTTC-ATGCCTGACCGTGTCCTCATCGGTGGT 639 Query 557 CGTGAAACACCCGAAGGGTTTAAAGCTGTCAAAGCCTTAAAAGACGTTTATGCTCAGTGG 616 ||||||||| | ||||| ||| ||| ||||||||||| |||||| ||||||| || ||| Sbjct 640 CGTGAAACAACTGAAGGCTTTGCAGCCGTCAAAGCCTTGAAAGACATTTATGCCCAATGG 699 Query 617 GTTCCAGAAGATAGAATCCTAACCACTAATCTCTGGTCCGCTGAGCTCACCAAGCTTGCT 676 || || ||||| |||||||| ||||| ||||| ||||| || ||||| |||||||||| Sbjct 700 GTCCCTGAAGAGAGAATCCTCACCACCAATCTATGGTCTGCCGAGCTTTCCAAGCTTGCA 759 Query 677 GCCAACGCATTCTTAGCCCAAAGAATCTCATCTGTCAATGCAATGTCTGCTCTCTGTGAA 736 || || || ||| ||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct 760 GCTAATGCCTTCCTAGCCCAGAGAATCTCATCAGTCAATGCAATGTCCGCTCTCTGTGAG 819 Query 737 GCCACTGGTGCGAATGTCTCTGAAGTCTCCTATGCTGTTGGTAAAGACTCTAGAATCGGT 796 || ||||| || |||||||| || ||||| |||||||| || ||||||||| | || ||| Sbjct 820 GCAACTGGCGCCAATGTCTCAGAGGTCTCTTATGCTGTGGGCAAAGACTCTCGTATTGGT 879 Query 797 CCCAAGTTCTTGAATTCGAGTGTCGGCTTTGGTGGCTCCTGTTTCCAGAAAGATATCCTC 856 |||||||||||||| || ||||| || || || || || ||||||||||||||||| ||| Sbjct 880 CCCAAGTTCTTGAACTCTAGTGTTGGGTTCGGAGGATCTTGTTTCCAGAAAGATATTCTC 939 Query 857 AACTTAGTCTACATCTGTGAATGCAACGGCCT-CCCTGAAGTAGCGGAATACTGGAAACA 915 ||||||||||||||||| |||||||||||| | ||| ||||| || || ||||||||||| Sbjct 940 AACTTAGTCTACATCTGCGAATGCAACGGCTTACCC-GAAGTTGCTGAGTACTGGAAACA 998 Query 916 AGTCATCAAGATCAATGACTACCAGAAAACCCGGTTTGTAAACCGCATTGTGTCCTCGAT 975 ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || || Sbjct 999 AGTCATCAAGATCAACGACTACCAGAAAACCCGATTTGTTAACCGCATTGTCTCTTCAAT 1058 Query 976 GTTCAACACCGTTTCCAACAAAAAGATTGCCGTCCTCGGGTTCGCCTTCAAGAAAGATAC 1035 ||| ||||| || ||||||||||||||||| || ||||| ||||| ||||||||||| || Sbjct 1059 GTTTAACACAGTCTCCAACAAAAAGATTGCGGTTCTCGGCTTCGCTTTCAAGAAAGACAC 1118 Query 1036 CGGAGACACGAGAGAGACTCCAGCCATTGATGTCTGCAAAGGTTTGTTAGGAGACAAAGC 1095 |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| || Sbjct 1119 TGGAGACACTAGAGAGACTCCAGCCATTGATGTCTGCAAAGGTCTGTTAGGTGACAAGGC 1178 Query 1096 CCGAATCAGCATCTATGATCCACAAGTCACTGAAGAACAGATCCAAAGAGACTTAACCAT 1155 || |||||||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1179 TCGTCTCAGCATCTACGACCCACAAGTCACTGAAGAGCAGATCCAAAGAGACTTAACCAT 1238 Query 1156 GAACAAATTCGACTGGGACCATCCAATTCACCTTCAACCCATGAGTCCAACCACTGTGAA 1215 ||||||||||||||||||||| ||| |||| || || |||||||| || ||||||||||| Sbjct 1239 GAACAAATTCGACTGGGACCACCCACTTCATCTCCAGCCCATGAGCCCCACCACTGTGAA 1298 Query 1216 ACAAGTCTCAGTCGTTTGGGACGCCTATGCTGCCACTAAAGATGCCCATGGAATCTGC-T 1274 ||||||||||||| ||||||||| || |||| || ||||| ||||| || |||||| | Sbjct 1299 GCAAGTCTCAGTCGCTTGGGACGCATACACTGCAACCAAAGACGCCCACGGTATCTGCAT 1358 Query 1275 TGTTAACGGAGTGGGACGAGTTTAAGTCGCTTGACTAT-GAGCGTATCTTTGAAAATATG 1333 | ||||| |||||||||||||| ||| ||||| | | |||| |||||||| |||||| Sbjct 1359 T-TTAACCGAGTGGGACGAGTTCAAGAAACTTGA-TTTCCAGCGGATCTTTGAGAATATG 1416 Query 1334 CAGAAACCAGCGTTTGTCTTCGATGGCAGAAATGTTGTTGATGCAGAGAAGCTGAGGAAG 1393 |||||||| || ||||| || || || ||||| || || || || || || || ||| || Sbjct 1417 CAGAAACCGGCTTTTGTTTTTGACGGTAGAAACGTGGTCGACGCTGATAAACTCAGGGAG 1476 Query 1394 ATAGGGTTTATTGTTTACTCTATTGGTAAGCCATTGGACCAGTGGCTCAAGGACATGCCT 1453 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1477 ATTGGGTTTATTGTTTACTCCATTGGTAAGCCATTGGACCAGTGGCTCAAGGACATGCCT 1536 Query 1454 GCTCTTGC 1461 |||||||| Sbjct 1537 GCTCTTGC 1544 > AT3G29360.1 | Symbols: | UDP-glucose 6-dehydrogenase family protein | chr3:11267091-11269229 REVERSE LENGTH=1794 Length=1794 Score = 1147 bits (621), Expect = 0.0 Identities = 1191/1463 (81%), Gaps = 52/1463 (4%) Strand=Plus/Plus Query 19 aaaaaTGGTGAAGATCTGCTGCATTGGAGCTGGTTATGTTGGTGGTCCAACTATGGCTGT 78 ||| ||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| || Sbjct 64 AAAGATGGTGAAGATATGTTGTATTGGAGCTGGGTATGTTGGTGGACCAACAATGGCAGT 123 Query 79 CATTGCTTTGAAATGTCCA-TCTGTTGAAGTTGCTGTTGTTGATATCTCTGTTCCACGGA 137 ||||| |||||||||||| | |||||||| || ||||||||||||||||| ||||| | Sbjct 124 GATTGCATTGAAATGTCCAGAC-GTTGAAGTAGCGGTTGTTGATATCTCTGTACCACGTA 182 Query 138 TC-ACTGCTTGGAACAGTGACCA-GCTTCCTATCTATGAGCCGGGCCTCGATGATGTTGT 195 || || |||||||||||||| || |||||| || || ||||| || || ||||||||||| Sbjct 183 TCAAC-GCTTGGAACAGTGA-CACGCTTCCGATTTACGAGCCTGGTCTTGATGATGTTGT 240 Query 196 TAAGCAATGCCGTGGCAAGAACCTCTTCTTTAGTACTGATGTGGAGAAACACGTGAGAGA 255 ||||||||||||||||||||||| ||||||||||||||||| |||||||| || || || Sbjct 241 GAAGCAATGCCGTGGCAAGAACCTTTTCTTTAGTACTGATGTTGAGAAACATGTTAGGGA 300 Query 256 AGCTGATATCGTCTTTGTCTCTGTGAATACCCCGACTAAGACTCGTGGTCTTGGAGCTGG 315 ||||||||| || ||||| ||||| || || |||||||||||| | |||||||| ||||| Sbjct 301 AGCTGATATTGTGTTTGTTTCTGTCAACACACCGACTAAGACTAGAGGTCTTGGTGCTGG 360 Query 316 TAAAGCTGCTGAT-TTGACTTACTGGGAAAGCGCAGCTCGGATGATTGCTGATGTTTCGG 374 ||||||||| ||| || || |||||||| ||||| || || ||||| ||||||||||||| Sbjct 361 TAAAGCTGCGGATCTT-ACGTACTGGGAGAGCGCTGCGCGTATGATCGCTGATGTTTCGG 419 Query 375 TTTCTGACAAGATCGTTGTCGAGAAATCAACTGTCCCTGTCAAAACCGCTGAAGCTATTG 434 | || || ||||| || || |||||||| ||||| || || ||||| ||||||||||||| Sbjct 420 TATCGGATAAGATTGTCGTTGAGAAATCGACTGTTCCGGTTAAAACAGCTGAAGCTATTG 479 Query 435 AGAAGATTCTGATGCACAACAGTAAAGGAATCAAGTTCCAGATTCTTTCCAA-CCCTGAG 493 |||||||| ||| || ||||||||||| || ||||| ||||||||||| || ||| ||| Sbjct 480 AGAAGATTTTGACACATAACAGTAAAGGGATTAAGTTTCAGATTCTTTCGAATCCC-GAG 538 Query 494 TTCCTT-GCTGAAGGAACCGCTATTGAA-GATCT-TTTCTATCCTGACCGTGTTCTCATC 550 || || || ||||||||||| ||| || || || ||| |||| ||||||||||| ||| Sbjct 539 TT-TTTGGCGGAAGGAACCGCGATT-AAGGACCTATTT-AATCCGGACCGTGTTCTTATC 595 Query 551 GGTGGTCGTGAAACACCC-GAAGGGTTTAAAGCTGT-CAAAGC-CTTAAAAGACGTTTAT 607 || || || ||||| ||| |||||||||||||| || || | | || || | | || ||| Sbjct 596 GGAGGGCGGGAAAC-CCCAGAAGGGTTTAAAGCGGTGCAGA-CTCTCAAGA-ATGTGTAT 652 Query 608 GCTCAGTGGGTTCCAGAA-GATAGAATCCTAACCACTAATCTCTGGTCCGCTGAGCTCAC 666 || || |||||||| ||| | | |||| |||| || ||||||||||| |||||||| | Sbjct 653 GCACACTGGGTTCCTGAAGGCCA-AATCATAACAACCAATCTCTGGTCTGCTGAGCTGTC 711 Query 667 CAAGCTTGCTGCCAACGCATTCTTAGCCCAAAGAATCTCATCTGTCAATGCAATGTCTGC 726 ||||||||| || ||||| ||||| || ||||| || ||||| || ||||| ||||| || Sbjct 712 CAAGCTTGCGGCAAACGCTTTCTTGGCTCAAAGGATTTCATCAGTGAATGCTATGTCGGC 771 Query 727 TCTCTGTGAAGCCACTGGTGCGA-ATGTCTCTG-AAGTCTCCTATGCTGTTGGTAAAGAC 784 ||| ||||||||||| || || | ||||| | | |||| || || || ||||||| |||| Sbjct 772 TCTGTGTGAAGCCACAGGCGC-AGATGTCAC-GCAAGTGTCTTACGCGGTTGGTACAGAC 829 Query 785 TCTAGAATCGGTCCCAAGTTCTTGAATTCGAGTGTCGGCTTTGGTGGCTCCTGTTTCCAG 844 || || || ||||||||||||||||| |||||||| || || ||||| || ||||||||| Sbjct 830 TCAAGGATTGGTCCCAAGTTCTTGAACTCGAGTGTTGGATTCGGTGGTTCGTGTTTCCAG 889 Query 845 AAAGATATCCTCAA-CTTAGTCTACATCTGTGAATGCAACGGCCTCCCTGAAGTAGCGGA 903 || || || || || ||| |||||||||||||| |||||||| ||||| ||||| || || Sbjct 890 AAGGACATTCTGAATCTT-GTCTACATCTGTGAGTGCAACGGACTCCCGGAAGTGGCAGA 948 Query 904 ATACTGGAAACAAGTCATCAAGATCAATGACTACCAGAAAACCCGGTTTGTAAACCGCAT 963 |||||||| ||||||||||||||||||||||||||||| | |||||| || ||||| | Sbjct 949 GTACTGGAAGCAAGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAACCGTGT 1008 Query 964 TGTGTCCTCGATGTTCAACACCGTTTCCAACAAAAAGATTGCCGTCCTCGGGTTCGCCTT 1023 ||| ||||| ||||||||| | || || ||||| |||||||| || ||||| ||||| || Sbjct 1009 TGTTTCCTCCATGTTCAACTCTGTATCAAACAAGAAGATTGCGGTTCTCGGTTTCGCATT 1068 Query 1024 CAAGAAAGATACCGGAGACACGAGAGAGACTCCAGCCATTGATGTCTGCAAAGGT-TTGT 1082 ||||||||| ||||| ||||| || |||||||||||||| ||||| ||||| ||| || | Sbjct 1069 CAAGAAAGACACCGGTGACACAAGGGAGACTCCAGCCATCGATGTGTGCAAGGGTCTT-T 1127 Query 1083 TAGGAGACAAAGCCCGAATCAGCATCTATGATCCACAAGTCACTGAAGAACAGATCCAAA 1142 ||| ||||||||| | | ||||| || || |||||||| ||||| || |||||||| | Sbjct 1128 TAGAAGACAAAGCAAGGCTAAGCATTTACGACCCACAAGTGACTGAGGATCAGATCCAGA 1187 Query 1143 GAGACTTAACCATGAACAAATTCGACTGGGACCATCCAATTCACCTT-CAACCCATGAGT 1201 | || ||| |||||||||| ||||||||||||||||| | || || || || ||||| Sbjct 1188 GGGATTTATCCATGAACAAGTTCGACTGGGACCATCCTCTACAT-TTGCAGCCAATGAGC 1246 Query 1202 CCAACCACTGTGAAACAAGTCTCAGTCGTTTGGGACGCCTATGCTGCCACTAAAGATGCC 1261 ||||| || ||||||||||| | || ||||||||| || | || ||||| || || Sbjct 1247 CCAACAACAGTGAAACAAGTGACCGTTACTTGGGACGCATACGAAGCAACTAAGGACGCT 1306 Query 1262 CATGGAATCTGCTTGTTAACGGAGTGGGACGAGTTTAAGT-CGCTTGACTATG-AGC-GT 1318 || || |||||| | | || |||||||| ||||| ||| | ||||| | | || | Sbjct 1307 CACGGTATCTGCATCATGACCGAGTGGGATGAGTTCAAGAAC-CTTGATT-TCCAGAAG- 1363 Query 1319 ATCTTTGAAAATATGCAGAAACCAGCGTTT-GTCTTCGATGGCAGAAATGTTGTTGA-T- 1375 |||||||| || |||||||||||||| ||| || |||||||| ||||| || | || | Sbjct 1364 ATCTTTGACAACATGCAGAAACCAGC-TTTCGTGTTCGATGGAAGAAACATTAT-GAATC 1421 Query 1376 -GCAGAGAAGCTGAGGAAGATAGGGTTT-ATTGTTTACTCTATTGGTAAGCCAT-TGGAC 1432 ||| | ||||| ||| |||| || ||| ||||||||||| ||||||||||| | | ||| Sbjct 1422 TGCA-A-AAGCTAAGGGAGATTGG-TTTCATTGTTTACTCCATTGGTAAGCC-TCTCGAC 1477 Query 1433 CAGTGGCTCAAGGACATGCCTGC 1455 | |||||||||||||||||||| Sbjct 1478 GACTGGCTCAAGGACATGCCTGC 1500 > AT3G01010.1 | Symbols: | UDP-glucose/GDP-mannose dehydrogenase family protein | chr3:4342-4818 FORWARD LENGTH=477 Length=477 Score = 662 bits (358), Expect = 0.0 Identities = 450/492 (91%), Gaps = 15/492 (3%) Strand=Plus/Plus Query 974 ATGTTCAACACCGTTTCCAACAAAAAGATTGCCGTCCTCGGGTTCGCCTTCAAGAAAGAT 1033 |||||||| || ||||||||||||||||||| ||||||| |||||||||| |||| Sbjct 1 ATGTTCAATACTGTTTCCAACAAAAAGATTGTTGTCCTCGAGTTCGCCTTC----AAGA- 55 Query 1034 ACCGGAGACACGAGAGAGACTCCAGCCATTGATGTCTGCAAAGGTTTGTTAGGAGACAAA 1093 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 56 A----AGACACGAGAGAGACTCCAGCCATTGACGTCTGCAAAGGTTTGTTAGGAGACAAG 111 Query 1094 GCCCGAATCAGCATCTATGATCCACAAGTCACTGAAGAACAGATCCAAAGAGACTTAACC 1153 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 112 GCCCGAATCAGCATCTATGATCCACAAGTCACGGAAGAACAAATCCAAAGAGACTTAACC 171 Query 1154 ATGAACAAATTCGACTGGGACCATCCAATTCACCTTCAACCCATGAGTCCAACCACTGTG 1213 ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 172 ATGAACACATTCGACTGGGACCATCCACTTCACCTCCAACCCATGAGTCCAACCACTGTG 231 Query 1214 AAACAAGTCTCAGTCGTTTGGGACGCCTATGCTGCCACTAAAGATGCCCATGGAATCTGC 1273 |||||||||||||| | ||||||||| || |||||||| ||||| ||||| ||||||||| Sbjct 232 AAACAAGTCTCAGTTGCTTGGGACGCTTACGCTGCCACCAAAGACGCCCACGGAATCTGC 291 Query 1274 TTGTTAACGGAGTGGGACGAGTTTAAGTCGCTTGACTATGAGCGTATCTTTGAAAATATG 1333 |||||||| ||||||||||||| |||| |||||||||||||||| || |||||||| ||| Sbjct 292 TTGTTAACCGAGTGGGACGAGTATAAGACGCTTGACTATGAGCGGATTTTTGAAAACATG 351 Query 1334 CAGAAACCAGCGTTTGTCTTCGATGGCAGAAATGTTGTTGATGCAGAGAAGCTGAGGAAG 1393 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 352 CAGAAACCAGCGTTTGTCTTCGATGGCAGAAATGTTTTTGATGCAGAGAAGCTGAGGAAG 411 Query 1394 ATAGGGTTTATTGTTTACTCTATTGGTAAGCCATTGGACCAGTGGCTCAAGGACATGCCT 1453 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct 412 ATAGGGTTTATTGTTTACTCTATTGGTAAGCCGTTGGACCAGTGGC--A----CATGCCT 465 Query 1454 GCTCTTGCTTAG 1465 |||||||||||| Sbjct 466 GCTCTTGCTTAG 477 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73292795700 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5