BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg927684

Length=270
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G19590.1 | Symbols: BUB3.1 | Transducin/WD40 repeat-like sup...   134    5e-31


> AT3G19590.1 | Symbols: BUB3.1 | Transducin/WD40 repeat-like superfamily 
protein | chr3:6805631-6808593 FORWARD LENGTH=1409
Length=1409

 Score =  134 bits (72),  Expect = 5e-31
 Identities = 76/78 (97%), Gaps = 0/78 (0%)
 Strand=Plus/Plus

Query  104  CGTGTGAGATTGTATGATGTGAGCACCAATTCGTTGAAAGGGGAGTTCTTACATGGCGGA  163
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  285  CGTGTGAGATTGTATGATGTGAGCACCAATTCGTTGAAAGGAGAGTTCTTACATGGCGGA  344

Query  164  GCAGTGCTCGATTGCTGT  181
            ||||| ||||||||||||
Sbjct  345  GCAGTACTCGATTGCTGT  362



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12365866254


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5