BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927711
Length=1810
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02320.1 | Symbols: | N2,N2-dimethylguanosine tRNA methyltr... 3105 0.0
AT5G15810.1 | Symbols: | N2,N2-dimethylguanosine tRNA methyltr... 1648 0.0
> AT3G02320.1 | Symbols: | N2,N2-dimethylguanosine tRNA methyltransferase
| chr3:469934-473717 FORWARD LENGTH=2158
Length=2158
Score = 3105 bits (1681), Expect = 0.0
Identities = 1760/1798 (98%), Gaps = 5/1798 (0%)
Strand=Plus/Plus
Query 16 AAGCAATGGAAACGGATCTGAATGACTATACTGTTATCAAGGAAGGAGAAGCTGAGATTC 75
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 159 AAGCAATGGAAACGGATCTGAATGATTATACTGTTATCAAGGAAGGAGAAGCTGAGATTC 218
Query 76 TCATGCACAAGAAGAATCAAGTCTTCTTCAATAAAGCTCAGGTGAACAATAGAGACATGT 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 TCATGCACAAGAAGAATCAAGTCTTCTTCAATAAAGCTCAGGTGAACAATAGAGACATGT 278
Query 136 CCATTGCTGTTCTAAGGGAATTTATATCAAAACGCAAGCAAGAGCATGAAGCTAAGTCAT 195
||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||
Sbjct 279 CCATTGCTGTTCTAAGGGAATTTCTATCGAAACGCAAGCAAGAGCATGAGGCTAAGTCAT 338
Query 196 CTAAAAGAACTAGACCAGCTTCCAAAGTGATCGAGAAGGATGCTTCTGAAGCTTCCAAGG 255
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 339 CTAAAAGAACTAGACCAGCTTCCAAAGTGATTGAGAAGGATGCTTCTGAAGCTTCCAAGG 398
Query 256 AAGAAACTCCGAGCAAGAACGGTATGAATAATGGTGATCACGAAGTAGCATCTGAAGATG 315
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 AAGAAACTCCTAGCGAGAACGGTATGAATAATGGTGATCACGAAGTAGCATCTGAAGATG 458
Query 316 GACCAAGCTCTGCATCAAAAGACCCTGCTAAGACAACAGAACGATTTGCACCTAGAGAAC 375
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 459 GACCAAGCTCTGTATCAAAAGACCCTGCTAAGACAACAGAACGATTTGCACCTAGAGAAC 518
Query 376 CCAAGCCACCAAAAGTTCTTGAGGCTTTGTCAGCTTCTGGGTTACGGGCTCTAAGATATG 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCAAGCCACCAAAAGTTCTTGAGGCTTTGTCAGCTTCTGGGTTACGGGCTCTAAGATATG 578
Query 436 CACGCGAAATAGAAGGAATTGGTCAGGTTGTGGCGTTGGATAATGATTTAGCATCGGTCG 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 579 CACGCGAAATAGAAGGAATTGGTCAGGTTGTGGCGTTGGATAATGATTTAGCATCGGTCG 638
Query 496 AAGCTTGCCAGAGAAACATAAAGTTCAATGGCTCAGTGGCTATTTCAAAGGTGGAGTCAC 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 AAGCTTGCCAGAGAAACATAAAGTTCAATGGCTCAGTGGCTATTTCAAAGGTGGAGTCAC 698
Query 556 ATCATACCGATGCTCGTGTCCATATGCTTACCCACCCTAAAGAATTTGATGTGGTTGATC 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 ATCATACCGATGCTCGTGTCCATATGCTTACCCACCCTAAAGAATTTGATGTGGTTGATC 758
Query 616 TTGATCCATATGGATCACCGTCTATTTTCCTTGACTCGGCTATTCAATCAGTCACGGATG 675
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 759 TTGATCCATATGGATCACCATCTATTTTCCTTGACTCGGCTATTCAATCAGTCACGGATG 818
Query 676 GTGGATTGCTAATGTGTACAGCAACTGACATGGCAGTGTTATGTGGTGGTAACGGTGAAG 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 GTGGATTGCTAATGTGTACAGCAACTGACATGGCAGTGTTATGTGGTGGTAACGGTGAAG 878
Query 736 TTTGCTATTCCAAATATGGTTCTTACCCATTGAGAGCGAAGTATTGTCATGAGATGGCTT 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 TTTGCTATTCCAAATATGGTTCTTACCCATTGAGAGCGAAGTATTGTCATGAGATGGCTT 938
Query 796 TGCGGATCCTTCTTGCCAGCATCGAGAGCCATGCAAACCGCTACAAGCGGTATATTGTTC 855
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 TGCGGATCCTCCTTGCCAGCATCGAGAGCCATGCAAACCGCTACAAGCGGTATATTGTTC 998
Query 856 CGGTGCTATCTGTGCAAATGGATTTCTATGTTCGTGTTTTTGTCCGCGTTTACACCTCGG 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 999 CGGTGCTATCTGTGCAAATGGATTTCTATGTTCGTGTTTTTGTCCGCGTTTACACCTCGG 1058
Query 916 CGAGTGCAATGAAGAACACTCCATTGAAACTCTCTTACGTATATCAATGCATTGGTTGTG 975
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1059 CGAGTGCAATGAAGAACACTCCATTGAAGCTCTCTTACGTATATCAATGCATTGGCTGTG 1118
Query 976 ATTCATTTCATCTTCAACCTGTTGGAAGATCTCTCCCTAAGAACAACAGTGTGAGGTATC 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 ATTCATTTCATCTTCAACCTGTTGGAAGATCTCTCCCTAAGAACAACAGTGTGAGGTATC 1178
Query 1036 TACCAGCAATTGGTCCGGTTGTGAAGCAGGATTGCAACCACTGTGGGAAGAAATATAACA 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 TACCAGCAATTGGTCCGGTTGTGAAGCAGGATTGCAACCACTGTGGGAAGAAATATAACA 1238
Query 1096 TGGGTGGACCAATATGGTCTGCTCCAATGCATGATCAAGAATGGGTGACTTCGATATTAA 1155
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1239 TGGGTGGACCAATATGGTCTGCTCCAATGCATGATCCAGAATGGGTGACTTCGATATTAA 1298
Query 1156 ACAGTGTAAAATCCATGAAAGACAGATATCCTGCTTATGACCTGATCTCTGCTGTACTTA 1215
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1299 ACAGTGTGAAATCCATGAAAGACAGATATCCTGCTTATGACCGGATCTCTGCTGTACTTA 1358
Query 1216 CTACAGTCTCCGAGGAATTGCTGGATGTTCCTCTGTTTTTGAGTCTACATAATCTTTGTG 1275
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1359 CTACAGTCTCCGAGGAATTGCTGGATGTTCCTCTGTTTTTGAGTCTGCATAATCTTTGTG 1418
Query 1276 CGACACTAAAGTGCATTTCACCATCAGCTGCAATGTTTCGATCAGCGGTTATTAATGCTA 1335
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1419 CGACACTAAAGTGTATTTCACCATCAGCTGCAATGTTTCGATCAGCGGTTATTAATGCTA 1478
Query 1336 ATTACCGTATCTCGGGGACTCATGTGAATCCGCTTGGCATGAAAACTGATGCTCCTATGG 1395
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1479 ATTACCGTATCTCTGGGACTCATGTGAATCCGCTCGGCATGAAAACTGATGCTCCTATGG 1538
Query 1396 AGGTTATCTGGGACATTATGCGCTGCTGGGTGAAGAATCATCCCATAAAGGCGCAATCGC 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1539 AGGTTATCTGGGACATTATGCGCTGCTGGGTGAAGAATCATCCCATAAAGGCGCAATCGC 1598
Query 1456 CTGAGCAACCCGGTAGTGTGATCTTGTCCAAAGAACCATCACATGAGGTTGATTTTTCGC 1515
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1599 CTGAACAACCCGGTAGTGTGATCTTGTCCAAAGAACCATCACATGAGGTTGATTTTTCGC 1658
Query 1516 GTCACATTGGTTCGCTGAGCAAGGCACAGGCAAAGAAAGTAGCTCGTTTTCTGCCAAATC 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1659 GTCACATTGGTTCGCTGAGCAAGGCACAGGCAAAGAAAGTAGCTCGTTTTCTGCCAAATC 1718
Query 1576 CAGAGAAGCATTGGGGTCCAAAGCTTAGGGCTGGTCGCCAGATTACGAGCAAACATGTAT 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1719 CAGAGAAGCATTGGGGTCCAAAGCTTAGGGCTGGTCGCCAGATTACGAGCAAACATGTAT 1778
Query 1636 CTCTTATTGGTCATGAAGCAGTCAATGGTCATCTTAACCAACACCCTGAAGAACTTAAAG 1695
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1779 CTCTTATTGGTCATGAAGCAGTCAATGGTCATCTTAGCCAACACCATGAAGAACTTAAAG 1838
Query 1696 AAGA---TGAAGAAGCAGAGCAAGAAGATAATGTCCAAGTAGA-GGTTGATCCGAAACGC 1751
|||| |||||||||||||| ||||||||||||||||| | | ||||||||| ||||||
Sbjct 1839 AAGAAGATGAAGAAGCAGAGCCAGAAGATAATGTCCAAG-ACAAGGTTGATCCAAAACGC 1897
Query 1752 CAGAAGACAACAACAGAGAATATTTCATCAACATCATAAGACAAAACACACAACGTTT 1809
||||||||| ||||||| |||||| | ||||||| |||||||||| |||| || ||||
Sbjct 1898 CAGAAGACAGCAACAGATAATATTACCTCAACATAATAAGACAAATCACAAAAAGTTT 1955
> AT5G15810.1 | Symbols: | N2,N2-dimethylguanosine tRNA methyltransferase
| chr5:5157798-5161358 FORWARD LENGTH=2313
Length=2313
Score = 1648 bits (892), Expect = 0.0
Identities = 1457/1728 (84%), Gaps = 45/1728 (3%)
Strand=Plus/Plus
Query 17 AGCAATGGAAACGGATCTGAATGACTATACTGTTATCAAGGAAGGAGAAGCTGAGATTCT 76
|||||||||||||||||| ||||| |||||||| || |||||||||||||||||| ||||
Sbjct 291 AGCAATGGAAACGGATCTCAATGATTATACTGTCATTAAGGAAGGAGAAGCTGAGGTTCT 350
Query 77 CATGCACAAGAAGAATCAAGTCTTCTTCAATAAAGCTCAGGTGAACAATAGAGACATGTC 136
|||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 351 TATGCACAAGAAGAACCAAGTCTTCTTCAACAAAGCTCAGGTTAACAATAGGGACATGTC 410
Query 137 CATTGCTGTTCTAAGGGAATTTAT-ATCAAAACGCAAGCAAGAGCATGAAGCTAAGTCAT 195
|||||||| ||||||| |||||| ||| |||||||||||||||||||| |||| || ||
Sbjct 411 TATTGCTGTGCTAAGGGCATTTATAATC-AAACGCAAGCAAGAGCATGAGGCTATGTTAT 469
Query 196 CTAAAAGAACTAGACCAGCTTCCAAAGTGATCGAGAAGGATGCT-TCTGAAGCTTCCAAG 254
|||||||| ||||| || || |||||| | |||||||||| | |||||| ||||||||
Sbjct 470 CTAAAAGAGCTAGATCATCTGGGAAAGTGGTTGAGAAGGATG-TCTCTGAAACTTCCAAG 528
Query 255 GAAGAAACTCCGAGC--AAGAACGGT-ATGAATAATGGTGATCACGAA-GTAGCATCTGA 310
||||||||||| | | || |||||| | | ||||||| | || || | || | | |
Sbjct 529 GAAGAAACTCCTA-CTGAA-AACGGTGACG-ATAATGG-AAAAACCAATGGAG-AAC--A 581
Query 311 AGATGGACCAAGCTC----TGCATCAAAAGACCCTGCTAAGACAACAGAACG-ATTTGCA 365
|| | | ||| ||| || | |||| || |||||||||| || | | || ||||
Sbjct 582 CGAAGTAACAA-CTCAGGATGGACCAAAGGAAGCTGCTAAGACCGCA-TATGAATCTGCA 639
Query 366 CCTAGAGAACCCAAGCCACCAAAAGTTCTTGAGGCTTTGTCAGCTTCTGGGTTACGGGCT 425
| || |||| ||| ||||||| ||| |||||||| |||||||||| ||| ||||||||
Sbjct 640 CGAAGGGAACTCAAACCACCAAGAGTGCTTGAGGCCCTGTCAGCTTCAGGGCTACGGGCT 699
Query 426 CTAAGATATGCACGCGAAATAGAAGGAATTGGTCAGGTTGTGGCGTTGGATAATGATTTA 485
| || ||||| || ||| | |||||||||||||| |||||||| || |||||||| |
Sbjct 700 TTGAGGTATGCTCGTGAAGTTGAAGGAATTGGTCAAGTTGTGGCTTTAGATAATGACCCA 759
Query 486 GCATCGGTCGAAGCTTGCCAGAGAAACATAAAGTTCAATGGCTCAG-TGGCTATTTCAAA 544
|||||||| ||||| |||||||||||||| ||||||||||| | | || ||| ||||||
Sbjct 760 GCATCGGTTGAAGCCTGCCAGAGAAACATTAAGTTCAATGG-TTTGATGTCTACTTCAAA 818
Query 545 GGTGGAGTCACATCATACCGATGCTCGTGTCCATATGCTTACCCACCCTAAAGAATTTGA 604
|||||||||||||| ||| ||||||||||| || ||||| | |||||| ||||| |||||
Sbjct 819 GGTGGAGTCACATCTTACTGATGCTCGTGTTCACATGCTCAGCCACCCAAAAGATTTTGA 878
Query 605 TGTGGTTGATCTTGATCCATATGGAT-CACCGTCTATTTTCCTTGACTCGGCTATTCAAT 663
||||||||||||||| |||||||| | | |||||||||||||||||||| ||| ||||||
Sbjct 879 TGTGGTTGATCTTGACCCATATGG-TGCGCCGTCTATTTTCCTTGACTCAGCTGTTCAAT 937
Query 664 CAGTCACGGATGGTGGATTGCTAATGTGTACAGCAACTGACATGGCAGTGTTATGTGGTG 723
|||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 938 CAGTTGCCGATGGTGGTTTGCTGATGTGTACAGCAACTGACATGGCAGTGTTATGTGGAG 997
Query 724 GTAACGGTGAAGTTTGCTATTCCAAATATGGTTCTTACCCATTGAGAGCGAAGTATTGTC 783
|||||| || || ||||||||||||||||| ||||| ||| ||| || ||| |||||||
Sbjct 998 CTAACGGCGAGGTCTGCTATTCCAAATATGGCTCTTATCCACTGAAAGGGAAATATTGTC 1057
Query 784 ATGAGATGGCTTTGCGGATCCTTCTTGCCAGCATCGAGAGCCATGCAAACCGCTACAAGC 843
|||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 1058 ATGAGATGGCTTTGAGGATCCTCCTCGCCAGCATCGAGAGCCATGCAAATCGCTACAAGC 1117
Query 844 GGTATATTGTTCCGGTGCTATCTGTGCAAATGGATTTCTATGTTCGTGTTTTTGTCCGCG 903
||||||||||||| || ||||| || |||||||||||||| |||||||||||||||||||
Sbjct 1118 GGTATATTGTTCCTGTTCTATCGGTCCAAATGGATTTCTACGTTCGTGTTTTTGTCCGCG 1177
Query 904 TTTACACCTCGGCGAGTGCAATGAAGAACACTCCATTGAAA-CTCTCTTACGTATATCAA 962
| ||||| |||||||||||||||||||| |||||| | ||| ||||| || || || |||
Sbjct 1178 TCTACACTTCGGCGAGTGCAATGAAGAATACTCCACT-AAAGCTCTCATATGTCTACCAA 1236
Query 963 TGCATTGGTTGTGATTCATTTCATCTTCAACCTGTTGGAAGATCTCTCCCTAAGAACAAC 1022
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||
Sbjct 1237 TGCATTGGTTGTGATTCCTTTCATCTTCAGTCTGTTGGAAGATCTCTCCCTAAGAATAAC 1296
Query 1023 AGTGTGAGGTATCTACCAGCAATTGGTCCGGTTGTGAAGCAGGATTGCAAC-CACTGTGG 1081
|||||||| |||||||| | | ||||||| ||||| |||||||||| | || |||||
Sbjct 1297 AGTGTGAGATATCTACCTGGAGTTGGTCCTGTTGTTCCTCAGGATTGCA-CTCATTGTGG 1355
Query 1082 GAAGAAATATAACATGGGTGGACCAATATGGTCTGCTCCAATGCATGATCAAGAATGGGT 1141
||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1356 AAAGAAATATAATATGGGTGGACCAATATGGTCTGCTCCAATCCACGATCAAGAATGGGT 1415
Query 1142 GACTTCGATATTAAACAGTGTAAAATCCATGAAAGACAGATATCCTGCTTATGACCTGA- 1200
|| ||||||| ||||| |||| ||||||||||||||||||||||||||||| |||| ||
Sbjct 1416 GAATTCGATACTAAACGGTGTTAAATCCATGAAAGACAGATATCCTGCTTACGACC-GAA 1474
Query 1201 TCT-CTGCTGTACTTACTACAGTCTCCGAGGAATTGCTGGATGTTCCTCTGTTTTTGAGT 1259
| | | ||||| ||||| ||| |||| |||||||||| ||||||||||| ||||||||
Sbjct 1475 TTTGC-GCTGTTCTTACCACAATCTCAGAGGAATTGCCAGATGTTCCTCTCTTTTTGAGC 1533
Query 1260 CTACATAATCTTTGTGCGACACTAAAGTGCATTTCACCATCAGCTGCAATGTTTCGATCA 1319
|| |||| ||| | ||| || ||||| || | ||||||||||||||| |||||||||||
Sbjct 1534 CTGCATAGTCTCTCTGCAACGCTAAAATGTACTTCACCATCAGCTGCTTTGTTTCGATCA 1593
Query 1320 GCGGTTATTAATGCTAATTACCGTATCTCGGGGACTCATGTGAATCCGCTTGGCATGAAA 1379
||||| || ||||| || |||||| |||| ||| | |||||||| |||||||| || |||
Sbjct 1594 GCGGTAATCAATGCAAAGTACCGTGTCTCTGGGTCCCATGTGAACCCGCTTGGGATTAAA 1653
Query 1380 ACTGATGCTCCTATGGAGGTTATCTGGGACATTATGCGCTGCTGGGTGAAGAATCATCCC 1439
||||||||||| |||||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct 1654 ACTGATGCTCCAATGGAGATTATCTGGGACATCATGCGGTGCTGGGTGAAAAATCATCCC 1713
Query 1440 ATAAAGGCGCAATCGCCTGAGCAACCCGGTAGTGTGAT-CTTGTCCAAAGAACCATCACA 1498
|||||| ||||||| ||||| || || || |||||||| || || ||||||||||| ||
Sbjct 1714 ATAAAGCCGCAATCACCTGAACATCCTGGAAGTGTGATTCTA-TCTAAAGAACCATCTCA 1772
Query 1499 TGAGGTTGATTTTTCGCGTCACATTGGTTCGCTGAGCAAGGCACAGGCAAAGAAAGTAGC 1558
| ||| ||| |||||||| ||| | |||||||| || || |||||||| |||||||||||
Sbjct 1773 TCAGGCTGACTTTTCGCGCCACGTCGGTTCGCTTAGTAAAGCACAGGCGAAGAAAGTAGC 1832
Query 1559 TCGTTTTCTGCCAAATCCAGAGAAGCATTGGGGTCCAAAGCTTAGGGCTGGTCGC-CAGA 1617
|| ||||| ||||| |||||||||||||||||||| ||| | ||||| ||||| || |
Sbjct 1833 CCGGTTTCTACCAAACCCAGAGAAGCATTGGGGTCCCAAGATAAGGGCAGGTCGTACA-A 1891
Query 1618 TTACGAGCAAACATGTATCTCTTATTGGTCATGAAGCAGTCAATGGTCATCTTAACCAAC 1677
| || |||||||||||||| ||| |||||||||||||||| || |||||||| || |||
Sbjct 1892 TCACAAGCAAACATGTATCGCTTCTTGGTCATGAAGCAGTAAACGGTCATCTCAAT-AAC 1950
Query 1678 ACCC-TGAAGAA-CTTAA-A-GAAGATGAAGAAGCAGA-GCAAGAAGA 1720
| | | ||||| | | | ||||| ||||||| ||| | |||||||
Sbjct 1951 AATCATAAAGAAGCAGGAGACGAAGAAGAAGAAGAAGAAG-AAGAAGA 1997
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89557772280
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5