BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927779
Length=1926
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02880.1 | Symbols: | Leucine-rich repeat protein kinase fa... 2952 0.0
AT5G16590.1 | Symbols: LRR1 | Leucine-rich repeat protein kinas... 841 0.0
AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:179... 71.3 3e-11
> AT3G02880.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:634653-637284 FORWARD LENGTH=2352
Length=2352
Score = 2952 bits (1598), Expect = 0.0
Identities = 1818/1926 (94%), Gaps = 8/1926 (0%)
Strand=Plus/Plus
Query 7 gaagaagaagaagaagaTGAAGTACAAGCGTAAGCTAAGTCTCTCTGTTGTCTTCTTCTT 66
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 151 GAAGAAGAAGAAGAAGATGAAGTATAAGCGTAAGCTAAGTCTCTCTGTTGTCTTCCTCTT 210
Query 67 CGTCTTCTATCTCGCGGCGGTGACTTCAGATCTAGATTCTGACCGGAGAGCTTTACTCGC 126
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 211 TGTCTTCTATCTCGCTGCGGTGACTTCAGATCTAGAGTCTGACCGGAGAGCTTTACTCGC 270
Query 127 TGTTCGTAATAGTGTTCGTGGCCGTCCTTTGTTATGGAACATGAGTGCTTCTTCTCCTTG 186
||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 271 TGTTCGTAACAGTGTCCGTGGCCGTCCTTTGCTATGGAACATGAGTGCTTCTTCTCCTTG 330
Query 187 TAATTGGCACGGAGT-CACTTGCGATGCGGGTCGGGTCACGGCTCTCCGATTACCCGGCG 245
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 331 TAATTGGCACGGAGTCCAC-TGCGATGCGGGTCGGGTCACGGCTCTCCGATTACCCGGAT 389
Query 246 CTGGTTTATTCGGTTCTTTACCCATCGGTGGAATTGGTAATCTAACCGAGCTTAAGActc 305
|||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||
Sbjct 390 CTGGTTTATTCGGTTCTTTACCAATCGGTGGTATTGGTAATCTAACCCAGCTTAAGACTC 449
Query 306 tctctctccgattcaattctctctctGGTCCAATCCCTGCGGATTTCTCAAACCTTGTTC 365
| |||||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||
Sbjct 450 TTTCTCTCCGGTTCAATTCTCTCTCTGGTCCTATCCCTTCGGATTTCTCCAACCTTGTTC 509
Query 366 TCCTCCGTTACTTGTATCTCCAAGGTAATGACTTTTCCGGTGAGATTCCGTCGTTTCTCT 425
||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||
Sbjct 510 TCCTCCGTTACTTGTATCTTCAAGGTAATGCCTTTTCCGGTGAGATTCCGTCGCTTCTCT 569
Query 426 TCACGCTTCCAAACCTAATCAGACTTAATCTTGGGGAGAATAAGTTCTCGGGTCGGATCC 485
|||||||||| | | |||||||| | ||||| ||||||||||| ||||||||||||||||
Sbjct 570 TCACGCTTCCGAGCATAATCAGAATCAATCTAGGGGAGAATAAATTCTCGGGTCGGATCC 629
Query 486 CGGATAATGTCAATTCTGCAACCCGGTTGATTACTCTGTATTTAGAGAGGAATCAACTCT 545
||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||
Sbjct 630 CGGATAATGTCAATTCTGCGACCCGGTTGGTTACTCTGTATTTGGAGAGGAATCAACTCT 689
Query 546 CAGGTCCGATCCCTGAGATCACGCTTCGTCTTCAACAGTTCAATGTTTCTTCTAATCAAT 605
| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |
Sbjct 690 CTGGTCCGATCCCTGAGATCACGCTTCCTCTTCAGCAATTCAATGTTTCTTCTAATCAGT 749
Query 606 TAAACGGATCGATTCCGAATTCGTTGTCGACTTGGCCTCGAACCGCTTTTGAAGGGAACA 665
||||||| || ||||||| |||||||||| ||||||||||||| ||||||||||| ||||
Sbjct 750 TAAACGGGTCTATTCCGAGTTCGTTGTCGTCTTGGCCTCGAACTGCTTTTGAAGGTAACA 809
Query 666 CTCTCTGTGGGAAGCCCTTAAACACTTGTGAGGCAGAGAGCCCCAA---TAGTGACGCTG 722
|||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||
Sbjct 810 CTCTCTGTGGGAAGCCTTTAGACACTTGTGAGGCAGAGAGCCCCAATGGTGGTGACGCTG 869
Query 723 GAGGTCCCAATACGCCGCCGAAGGAA-AAGGATAGCGACAAATTATCCGCCGGAGCTATT 781
|||| ||||||||||||||| | ||| || ||||||||||| ||||||||||||||||||
Sbjct 870 GAGGACCCAATACGCCGCCGGA-GAAGAAAGATAGCGACAAGTTATCCGCCGGAGCTATT 928
Query 782 GCCGGAATTGTGATCGGATGTGTTGTTGGTCTATTGCTGCTTCTTTTGATTCTGTTCTGT 841
| ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 929 GTCGGGATTGTGATCGGATGTGTTGTTGGTCTGTTACTGCTTCTTTTGATTCTGTTCTGT 988
Query 842 CTCTGTagaaagagaaagaaagaagagaaCGTTACAGCTAGAAATGTTGAAGCTCCTGTC 901
||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||
Sbjct 989 CTCTGTAGAAAGAGAAAGAAAGAAGAGAACGTTCCATCTAGGAATGTTGAAGCTCCTGTC 1048
Query 902 GCCGCTCCGACCTCCTCAGCTGCTATACCCAAGGAAAGGGTGGTTGATGTCCCGCCGGCG 961
|| ||| |||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||
Sbjct 1049 GCTGCTGCGACTTCCTCCGCTGCTATACCAAAGGAAACGGTGGTTGTTGTCCCGCCGGCT 1108
Query 962 AAGGCTACGGCTTCGGAGAGTGGTGTGGTGAGTAAAGATTTGACCTTTTTCGTGAAATCT 1021
|||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1109 AAGGCTACGGGGTCGGAGAGTGGTGCGGTGAATAAAGATTTGACCTTTTTCGTGAAATCT 1168
Query 1022 TTCGGGGAATTCGATTTGGATGGATTGTTGAAGGCTTCAGCTGAGGTCCTTGGGAAAGGA 1081
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1169 TTCGGGGAATTCGATTTGGATGGATTGTTGAAGGCTTCAGCTGAGGTTCTTGGGAAAGGA 1228
Query 1082 ACAGTTGGGTCTTCGTATAAGGCAAGCTTTGATCATGGATTAGTGGTGGCTGTGAAGCGT 1141
||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct 1229 ACAGTTGGGTCGTCGTATAAGGCAAGCTTTGAGCATGGGTTAGTGGTGGCTGTGAAACGG 1288
Query 1142 TTAAGAGACGTTGTGGTGCCTGAGAAAGAGTTCAGAGAGAGATTGCAGGTTTTGGGATCA 1201
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1289 TTAAGAGATGTTGTGGTGCCTGAGAAAGAGTTCAGAGAGAGATTGCATGTTTTGGGATCA 1348
Query 1202 ATGAGTCATGCCAATCTTGTGACTCTGATCGCTTACTATTTCAGCCGCGACGAGAAGCTT 1261
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1349 ATGAGTCATGCCAATCTCGTGACTCTGATCGCTTACTATTTCAGCCGTGACGAGAAGCTT 1408
Query 1262 CTTGTCTTTGAGTACATGTCTAGAGGAAGCTTGTCTGCGCTATTGCACGGGAACAAAGGA 1321
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct 1409 CTTGTCTTTGAGTACATGTCTAAAGGAAGCTTGTCTGCGATATTGCACGGGAACAAAGGA 1468
Query 1322 AACGGGAGAACTCCGTTGAACTGGGAAACTAGAGCCGGTATAGCCGTAGGAGCTGCAAGA 1381
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1469 AACGGGAGAACTCCGTTGAACTGGGAAACCAGAGCCGGTATAGCCTTAGGAGCTGCAAGA 1528
Query 1382 GCGATTAGCTACCTACATTCGCGTGATGCCACAACTTCTCATGGAAACATTAAGTCCTCG 1441
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1529 GCGATTAGCTACCTACATTCGCGTGATGGGACAACTTCTCATGGAAACATTAAGTCCTCG 1588
Query 1442 AACATACTATTATCTGACTCCTATGAAGCTAAGGTCTCTGATTACGGTCTTGCTCCTATC 1501
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1589 AACATACTATTATCTGACTCCTATGAAGCTAAGGTCTCTGATTACGGTCTTGCTCCCATC 1648
Query 1502 ATTAGTTCTACATCTGCACCTAACCGTATTGATGGCTACCGTGCCCCTGAAGTCACCGAT 1561
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1649 ATTAGTTCTACATCTGCACCTAACCGTATTGATGGCTACCGTGCCCCTGAAATCACTGAT 1708
Query 1562 GCTCGCAAAATCTCCCAAAAAGCTGATGTCTATAGCTTTGGCGTCCTAATCCTTGAATTA 1621
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1709 GCTCGCAAAATATCCCAAAAAGCTGATGTCTATAGCTTTGGCGTCCTAATCCTTGAATTA 1768
Query 1622 CTCACAGGTAAGTCTCCAACGCATCAGCAATTGAATGAAGAAGGTGTCGATTTGCCAAGA 1681
||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||
Sbjct 1769 CTCACAGGTAAGTCTCCAACGCATCAGCAGTTGAATGAAGAAGGCGTAGATTTGCCGAGA 1828
Query 1682 TGGGTCCAATCTGTTACCGATCAACAATCACCGTCCGATGTGCTTGATCCCGAGCTCACA 1741
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1829 TGGGTCCAATCTGTTACCGAGCAACAAACACCGTCCGATGTGCTTGATCCCGAGCTCACA 1888
Query 1742 AGGTACCAACCTGAGGGCAATGAGAACATCATTCGTTTATTGAAGATCGGTATGAGTTGT 1801
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1889 AGGTACCAACCTGAGGGCAATGAGAACATCATTCGTTTATTGAAGATCGGTATGAGCTGT 1948
Query 1802 ACGGCTCAATTCCCAGATAGTCGTCCTTCAATGGCCGAAGTCACCAGACTCATTGAGGAG 1861
|||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1949 ACGGCTCAGTTCCCAGATAGTCGTCCTTCGATGGCTGAAGTCACCAGACTCATTGAGGAG 2008
Query 1862 GTTTCCCATTCATCTGGCTCCCCAAATCCAGTATCCGACTGATTTTT-GGGGGTCTAAAT 1920
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 2009 GTTTCTCATTCATCTGGCTCCCCAAATCCTGTATCCGACTGATTTTTTGGGGGTCTAAAT 2068
Query 1921 TGATTG 1926
||||||
Sbjct 2069 TGATTG 2074
> AT5G16590.1 | Symbols: LRR1 | Leucine-rich repeat protein kinase
family protein | chr5:5431681-5434134 FORWARD LENGTH=2272
Length=2272
Score = 841 bits (455), Expect = 0.0
Identities = 778/932 (83%), Gaps = 30/932 (3%)
Strand=Plus/Plus
Query 989 GTGAGTAAAGATTTGACCTTTTTCGTGAAATCTTTCGGGGAATTCGAT-TTGGATGGATT 1047
|||||||||||| |||| |||||||||||||||||||| || || ||| || ||||||||
Sbjct 1145 GTGAGTAAAGATCTGACATTTTTCGTGAAATCTTTCGGCGAGTTTGATCTT-GATGGATT 1203
Query 1048 GTTGAAGGCTTCAGCTGAGGTCCTTGGGAAAGGAACAGTT-GGGTCTTCGTATAAGGCAA 1106
| |||| ||||| || || || ||||| |||||||| ||| || |||||||| ||||| |
Sbjct 1204 GCTGAAAGCTTCTGCGGAAGTACTTGGTAAAGGAAC-GTTCGGATCTTCGTACAAGGCCA 1262
Query 1107 GCTTT-GATCATGGATTAGTGGTGGCTGTGAAGCGTTTAAGAGACGTTGTGGTGCCTGAG 1165
| ||| ||||| |||||||||||||||||||| || || ||||| || ||||| ||||||
Sbjct 1263 G-TTTCGATCACGGATTAGTGGTGGCTGTGAAACGATTGAGAGATGTCGTGGTTCCTGAG 1321
Query 1166 AAAGAGTTCAGAGAGAGATTGCAGGTT-TTGGGATCAATGAGTCATGCCAATCTTGTGAC 1224
|||||||||||||||| |||||||||| || ||||| || || |||||||||||||||||
Sbjct 1322 AAAGAGTTCAGAGAGAAATTGCAGGTTCTT-GGATCCATAAGCCATGCCAATCTTGTGAC 1380
Query 1225 -TCTGATCGCTTACTATTTCAGCCGCGACGAGAAGCTTC-TTGTCTTT-GAGTACATGTC 1281
| |||| || || || |||||||||||||| |||| || |||| ||| || ||||||||
Sbjct 1381 AT-TGATTGCATATTACTTCAGCCGCGACGAAAAGC-TCGTTGT-TTTCGAATACATGTC 1437
Query 1282 TAGAGGAAGCTTGTCTGCGCTATTGCACGGGAACAAAGGAAACGGGAGAACTCCGTTGAA 1341
||||||||||||||||||||| || |||||||||||||||| || |||| ||| |||||
Sbjct 1438 TAGAGGAAGCTTGTCTGCGCTGTTACACGGGAACAAAGGAAGTGGCAGAAGTCCATTGAA 1497
Query 1342 CTGGGAAACTAGAGCCGGTATAGCCGTAGGAGCTGCAAGAGCGATTAGCTACCTACATTC 1401
|||||||| |||||| |||||| ||||||| |||||||| ||||||||||| |||||
Sbjct 1498 TTGGGAAACGAGAGCCAATATAGCATTAGGAGCCGCAAGAGCAATTAGCTACCTCCATTC 1557
Query 1402 GCGTGATGCCACAACTTCTCATGGAAACATTAAGTCCTCGAACATACTATTATCTGACTC 1461
|||||| || ||||| |||||||| |||||||| || || ||||| ||||| || || ||
Sbjct 1558 GCGTGACGCGACAACATCTCATGGCAACATTAAATCATCTAACATTCTATTGTCAGAATC 1617
Query 1462 CTATGAAGCTAAGGTCTCTGATTACGGTCTTGCTCCTATCATTAGTTCTACATCTGCACC 1521
|| |||||||||||||||||| ||| ||||||| ||||| || || |||| ||| ||||
Sbjct 1618 CTTTGAAGCTAAGGTCTCTGACTACTGTCTTGCACCTATGATCAGCCCTACTTCTACACC 1677
Query 1522 TAACCGTATTGATGGCTACCGTGCCCCTGAAGTCACCGATGCTCGCAAAATCTCCCAAAA 1581
|||||| |||||||| ||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct 1678 TAACCGCATTGATGGTTACCGAGCTCCTGAAGTAACCGATGCTCGTAAAATCTCCCAAAA 1737
Query 1582 AGCTGATGTCTATAGCTTTGGCGTCCTAATCCTTGAATTACTCACAGGTAAGTCTCCAAC 1641
|||||||| || ||||| || || || || ||||||||||||||||| || ||||||||
Sbjct 1738 GGCTGATGTTTACAGCTTCGGTGTTCTCATTCTTGAATTACTCACAGGGAAATCTCCAAC 1797
Query 1642 GCATCAGCAATTGA-ATGAAGAAGGTGTCGATTTGCCAAGATGGGTC-CAATCTGTT-AC 1698
||||||||| || | | |||||||| || ||||| || |||||||| || || | | ||
Sbjct 1798 GCATCAGCAGTT-ACACGAAGAAGGAGTAGATTTACCGAGATGGGTTTCA-TC-GATCAC 1854
Query 1699 CGATCAACAATCACCGTCCGATGTGCTTGATCCCGAGCTCACAAGGTACCAACCTGAGGG 1758
|| ||||||||||| || |||||| ||||||| |||||||||||||| ||| | || |
Sbjct 1855 TGAACAACAATCACCATCAGATGTGTTTGATCCAGAGCTCACAAGGTATCAATCGGACAG 1914
Query 1759 CAATGAGAACATCATTC-GT-TTATTGAAGATCGGTATGAGTTGTACGGCTCAAT-TCCC 1815
|||||||||||| || | | || || || |||||||| ||||||||| |||| | |||
Sbjct 1915 CAATGAGAACATGAT-CAGGCTT-TTAAACATCGGTATAAGTTGTACGACTCAGTATCC- 1971
Query 1816 AGATAGTCGTCCTTCAATGGCC-GAAGTCACCAGACTCATTGAGGAGGTTTCCCATTCAT 1874
||||||||||||| ||||| || |||||||| |||||||| ||||||||||| | ||||
Sbjct 1972 AGATAGTCGTCCTACAATG-CCTGAAGTCACAAGACTCATCGAGGAGGTTTCTCGTTCAC 2030
Query 1875 CTGGCTCC-CCAAATCCAGTATCCGACTGATT 1905
||| || | ||| ||| | ||||| |||||
Sbjct 2031 CTG-CTTCACCAGGTCCTTTGTCCGATTGATT 2061
Score = 326 bits (176), Expect = 6e-88
Identities = 666/888 (75%), Gaps = 92/888 (10%)
Strand=Plus/Plus
Query 14 aagaagaagaTGAAGTACAAG-CGTAAGCTAAGTCTCTCTGTTGTCTTCTTCTTCGTCTT 72
||||||||||||||| ||||| | || || ||||||| |||||||||||| | ||
Sbjct 173 AAGAAGAAGATGAAGAACAAGAC-CAATTTAGGTCTCTC---AGTCTTCTTCTTC-T-TT 226
Query 73 CTA--TCTCGCGGCGGTGACTTCAGATCTAGATTCTGACCGGA-GAGCTTTACTCGCTGT 129
|| ||||| | ||||| ||||||||||| |||| | || ||||| || |||| |
Sbjct 227 ATATGTCTCGTTTCCGTGACATCAGATCTAGAAGCTGATC-GACGAGCTCTAATCGCACT 285
Query 130 TCGTAATAGTGTTCGTGGCCGTCCTTTGTTATGGAA-CATGAGTGCTTCTTCTCCTTGTA 188
|||| | |||||| ||| ||||| ||| | ||||| | | | || | | || ||||
Sbjct 286 TCGTGACGGTGTTCATGGGCGTCCATTGCTGTGGAATC-TAACAGC-AC--CACCGTGTA 341
Query 189 ATT-GGCACGGAGT-CACTTGCGATG-CGGGTCGGGTCACGGCTCTCCGATTACCCGGCG 245
|| || | ||||| || || || | ||||||| ||||| || |||||||||||||| |
Sbjct 342 CTTGGGGA-GGAGTCCA-ATGTGA-GTCGGGTCGTGTCACAGCACTCCGATTACCCGGTG 398
Query 246 CT-GGTTTATTC-GGTTCTTTACCCATCGGTGGAATTGGTAATCTAACCGAGCT-TAAGA 302
| |||||| || ||| | ||||| ||| | || || || || || |||| || |
Sbjct 399 -TGGGTTTA-TCGGGTCCATTACCAATC---GCCATCGGAAACCTTACAAAGCTCGAA-A 452
Query 303 ctctctc-tctccgattcaattctc-tctctGGTCCAATCCCTG-CGGATTTCTCAAACC 359
|| | || | ||||||||||| ||| | | ||||| |||| | |||||||| ||||||
Sbjct 453 CTTTATCAT-TCCGATTCAATGCTCTTAAC-GGTCCTCTCCC-GCCGGATTTCGCAAACC 509
Query 360 TTGTTCTCCTCCGTTACTTGTATCTCCAAGGTAATGAC-TTTTCCGGTGAGATTCCGTCG 418
| ||| ||||||||||||||||| ||||| || | | |||||||| |||||||| |||
Sbjct 510 TAACTCTTCTCCGTTACTTGTATCTTCAAGGAAACG-CATTTTCCGGCGAGATTCCTTCG 568
Query 419 TTTCTCTTCACGCTTCCAAAC-CTAATCAGACTTAATCTTGGGGAGAATAAGTTCTCGGG 477
||||||||||| || |||||| || || || | ||||| | ||||||| |||| |||
Sbjct 569 TTTCTCTTCACTCTACCAAACATTATTCGGA-TCAATCTCGCCCAGAATAATTTCTTGGG 627
Query 478 TCGGATCCCGGATAATGTCAATTCTGCAACCCGGTT-GATTACTCTGTATTTAGAGAGGA 536
|||||||||||||||||||||||||||||||||||| | | ||||| || || | ||||
Sbjct 628 TCGGATCCCGGATAATGTCAATTCTGCAACCCGGTTAGCT-ACTCTTTACTT-GC-AGGA 684
Query 537 -A-TCAACTCTCAGGTCCGATCCCTGAGATCACGCTTC-GTCTTCAACAGTTCAATGTTT 593
| ||||||| | ||||| ||||| ||||| | | || | ||||||||||| ||||| |
Sbjct 685 TAATCAACTCACCGGTCCAATCCCGGAGATTAAGATTAAG-CTTCAACAGTTTAATGTCT 743
Query 594 CTTCTAATCAATTAAACGGATCGATTCCGAATTCGTTGTCGACT-TGGCCTCGAA-CCGC 651
| || ||||| |||||||| ||||||||| || |||||||| | || || | || ||||
Sbjct 744 CATCCAATCAGTTAAACGGGTCGATTCCGGATCCGTTGTCGGGTATG-CC-CAAAACCGC 801
Query 652 -TTTTGAAGGGAACACT-CTCTGTGGGAAGCCCTTAAACACTTGTGAGG-CAGA-GAGCC 707
|||| | || || | |||||||||||||| ||| | |||| | || | | ||
Sbjct 802 CTTTTTA-GGCAATT-TGCTCTGTGGGAAGCCGTTAGATGCTTGCCCTGTCA-ATG-GCA 857
Query 708 CCAATAGTGACGCTGGAGGTCCCAAT-ACGCC-GCCGAAGGAAAAGG-ATA-GCGACAAA 763
| | | || | || | | | ||||| | || |||||||| | | |||||||
Sbjct 858 C---T-G-GAAAC-GG---TACTG-TGACGCCTG--GA-GGAAAAGGGAAAAGCGACAAG 904
Query 764 TTATCCGCCGGAGCTATTGCCGGAATTGTGATCGGATGTGTT-GT-TGGTCTAT-T-GCT 819
||||| ||||||||||||| |||||| |||||||| ||| || || | | || | | | |
Sbjct 905 TTATCTGCCGGAGCTATTGTCGGAATAGTGATCGGCTGT-TTCGTCTTG-CT-TCTCG-T 960
Query 820 GCTTCTT-TTGATTC-TGTTCTGTCTCTGTagaaaga-gaaagaaaga 864
|||| || ||||| | ||||||||||||||||||||| ||| ||||||
Sbjct 961 GCTT-TTCTTGAT-CGTGTTCTGTCTCTGTAGAAAGAAGAA-GAAAGA 1005
> AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:17918391-17920985
FORWARD LENGTH=2294
Length=2294
Score = 71.3 bits (38), Expect = 3e-11
Identities = 49/54 (91%), Gaps = 2/54 (4%)
Strand=Plus/Plus
Query 759 ACAAA-TTATCCGCCGGAGCTATTGCCGGAATTGTGATCGGATGTGTTGTTGGT 811
||||| || |||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 869 ACAAACTT-TCCGGTGGAGCTATTGCCGGAATTGTGATCGGATGTGTGGTTGGT 921
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95381035500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5