BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927786
Length=2074
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02930.1 | Symbols: | Plant protein of unknown function (DU... 1694 0.0
AT5G16730.1 | Symbols: | Plant protein of unknown function (DU... 699 0.0
> AT3G02930.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr3:655306-658319 FORWARD LENGTH=2421
Length=2421
Score = 1694 bits (917), Expect = 0.0
Identities = 1058/1123 (94%), Gaps = 21/1123 (2%)
Strand=Plus/Plus
Query 935 AGAACTGGAGAGCTCGAAGGAGGAAGAGGAGAAGAGTAAGAAAGCAATGGAGAGTTTAGC 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 AGAACTGGAGAGCTCGAAGGAGGAAGAGGAGAAGAGTAAGAAAGCAATGGAGAGTTTAGC 1376
Query 995 TTCAGCATTGCACGAAGTGTCGAGTGAATCACGCGAGTTGAAAGAAAAATTGCTGAGTCA 1054
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1377 TTCAGCATTGCACGAAGTGTCAAGTGAATCACGTGAGTTGAAAGAAAAATTGCTGAGTC- 1435
Query 1055 G-GGTGATCAGGATTATGAAACACAGATAGAAGATCTGAAGTTGGTCATTAAAGCAACGA 1113
| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1436 GAGGTGATCAAAATTATGAAACACAGATAGAAGATCTGAAGTTGGTGATTAAAGCAACGA 1495
Query 1114 ACAAGAAGTATGAGAATATGCTTGATGAGGCGAGACATGAGATCGATGTTCTTGTCAATG 1173
|||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1496 ACAACAAGTACGAGAACATGCTTGACGAGGCGAGACATGAGATCGATGTTCTTGTCAATG 1555
Query 1174 CGGTAGAACAAACCAAGAAACAGTTCGAAAGCGCAATGGTAGATTGGGAGATGAGAGAAG 1233
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1556 CGGTAGAACAAACCAAGAAACAGTTTGAGAGCGCAATGGTAGATTGGGAGATGAGAGAAG 1615
Query 1234 CCGGTTTGGTGAATCACGTGAAGGAATTTGATGAAGAAGTTTCTTCAATGGGGAAAGAAA 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 CCGGTTTGGTGAATCACGTGAAGGAATTTGATGAAGAAGTTTCTTCAATGGGGAAAGAAA 1675
Query 1294 TGAATAGGTTGGGCAATTTGGTTAAAAGGACAAAGGAAGAAGCTGATGCATCATGGGAAA 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 TGAATAGGTTGGGCAATTTGGTTAAAAGGACAAAGGAAGAAGCTGATGCATCATGGGAAA 1735
Query 1354 AAGAATCCCAAATGAGAGATAGCCTTAAAGAAGTGGAAGATGAGGTGATTTATCTTCAGG 1413
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1736 AAGAATCCCAAATGAGAGATTGTCTTAAAGAAGTGGAAGATGAGGTGATTTATCTTCAGG 1795
Query 1414 AAACTCTCAGGGAAGCGAAAGCTGAAACTTTGAAACTAAAGGGGAAAATGTTGGATAAAG 1473
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1796 AAACTCTCAGGGAAGCGAAAGCTGAAACCTTGAAACTAAAGGGGAAGATGTTGGATAAAG 1855
Query 1474 AAACTGAGTTTCAAAGCGTTGTTCATGAGAACGATGAACTCAGAGTGAAACAGGATGATT 1533
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 AAACTGAGTTTCAAAGCATTGTTCATGAGAACGATGAACTCAGAGTGAAACAGGATGATT 1915
Query 1534 CTCTGAAGAAGATCAAGGAGCTATCGGAGTTACTCGAAGAAGCATTAGCCAAGAAACATA 1593
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1916 CTCTGAAGAAGATCAAGGAACTATCGGAGTTACTCGAAGAAGCATTGGCCAAGAAACATA 1975
Query 1594 CAGAAGAGGACGGTGAGCTCAGTGAGAGTGAAAAAGACTATGATTTGCTTCCAAAGGTGG 1653
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1976 TTGAAGAGAACGGTGAGCTCAGTGAGAGTGAAAAAGACTATGATTTGCTGCCAAAGGTGG 2035
Query 1654 TCGAGTTTTCTGAGGAAAATGGTTATAGAAATGCAGAAGAGAAGTCTTCTAAAGTAAAAA 1713
| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct 2036 TTGAGTTTTCTGAGGAAAATGGTTATAGAAGTGCAGAAGAGAAGTCTTCTAAAGTAGAGA 2095
Query 1714 CCCTCGATGGCATGAACATGAAACTTGAGGAGGACATTGAGAAGAAGGAAAAGAAAGAAC 1773
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2096 CCCTCGATGGCATGAACATGAAACTTGAGGAGGACACCGAGAAGAAGGAAAAGAAAGAAC 2155
Query 1774 ATTCCCCGGATGATGAGACAGTTGAAGTTGAGTTTAAAATGTGGGAAAGTTGTCAGATTG 1833
||| || || |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 2156 GTTCTCCAGAGGATGAGACAGTTGAAGTTGAATTCAAAATGTGGGAAAGTTGTCAGATTG 2215
Query 1834 AGAAGAAAGAAGTTTTCCACAAGGGAAAACCAGAACAAGAGTCTGCAAAAGAAGTAGAGG 1893
|||||||||||||||| || || | || | ||||||||||||| |||||
Sbjct 2216 AGAAGAAAGAAGTTTTTCATAA---A------GA----G--TCTGCAAAAGAAGAAGAGG 2260
Query 1894 AAGACTTAAACGTGATAGACCAAAGCCAGAAAACCTCGCCTGTAAATGGATTAACCGGag 1953
|||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2261 AAGACTTAAATGTGGTGGACCAAAGCCAGAAAACCTCGCCAGTAAATGGATTAACCGGAG 2320
Query 1954 aagatgaactggtgaa-g-gaacaggaaaagaagaagaagaagaCATTGTTTGGTAAAGT 2011
||||||| ||| |||| | ||| || | ||||||||||||||||||||||||||||||||
Sbjct 2321 AAGATGAGCTGTTGAAAGAGAA-AG-AGAAGAAGAAGAAGAAGACATTGTTTGGTAAAGT 2378
Query 2012 TGGGAATCTTCTCAAGAAGAAAGGACCCGTGAATCAGAAATAA 2054
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379 TGGGAATCTTCTCAAGAAGAAAGGACCCGTGAATCAGAAATAA 2421
Score = 1330 bits (720), Expect = 0.0
Identities = 851/915 (93%), Gaps = 6/915 (1%)
Strand=Plus/Plus
Query 21 ATGGCTTCCAAGA-TAAAAACTGGTTTATCTGAAACCACTTTG-GGAAAATCATGTCCAG 78
|||||||| |||| |||||| |||||||||||| || |||||| || ||||||| | ||
Sbjct 1 ATGGCTTCTAAGATTAAAAA-TGGTTTATCTGACACTACTTTGAGG-AAATCATCTTCAA 58
Query 79 CATCTCTAAGAGTGCCTAGACTTACTCGGATAGTGACTAAACCTGAATCTACTTCTCCTT 138
|||||||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||
Sbjct 59 CATCTCTAAGAGTGCCTAGACTCACTCGGATTGTGACTAAACCTGATTCTAATTCTCCTT 118
Query 139 CACCGACTCAACAACAGTCACGTCTTTCCTTCGAGCGCTCTTCTTCTAATTCAAAGCCTT 198
|||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||
Sbjct 119 CACCGACTCAACAACAGTCACGGCTTTCGTTCGAGCGCCCTTCTTCTAACTCAAAGCCTA 178
Query 199 CTACTGATAAGAGGTCCCCCAAAGCTCGAACCCCACCAGAAAAAACTCAAATACGGGCTG 258
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 179 GTACTGATAAGAGGTCCCCCAAAGCTCCAACCCCACCAGAAAAAACTCAAATACGGGCTG 238
Query 259 TGAAAGGATCAGAAACACAACCTCGGTCAGTTCAAATCAAGGAAGATTTGAGGAAAGCCA 318
||| || ||||||| | ||||||| |||||||||||||||||||||||| | ||||||||
Sbjct 239 TGAGAGTATCAGAATCGCAACCTCAGTCAGTTCAAATCAAGGAAGATTTAAAGAAAGCCA 298
Query 319 ATGAGCTGATAGCATCGCTTGAGAATGAGAAAGCTAAAGCACTTGATCAACTTAAAGAAG 378
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 299 ATGAGCTGATAGCATCGCTCGAGAATGAAAAAGCTAAAGCACTTGATCAACTTAAAGAAG 358
Query 379 CGCGGAAAGAAGCTGAAGAGGCATCTGACAAGCTAGATGAGGCTGTA-AATGCGCAGAAA 437
|||||||||||||||||||||||||||| || |||||||||||| || || || ||||||
Sbjct 359 CGCGGAAAGAAGCTGAAGAGGCATCTGAGAAACTAGATGAGGCTTTAGAA-GCTCAGAAA 417
Query 438 AAGGCCCAAGAGAACTTTGAAATTGAGAAATTTGAGGTTGTTGAGGCGGGGATAGAGGCG 497
||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 418 AAGTCCCTGGAGAACTTCGAAATTGAGAAATTTGAGGTTGTTGAGGCAGGGATAGAGGCG 477
Query 498 GTTCagaggaaagaagaagaattgaagaaagaactagagaatgtcaagaaCCAACATGCT 557
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 478 GTTCAGAGAAAAGAAGAAGAGTTGAAGAAAGAACTAGAGAATGTCAAGAACCAACATGCT 537
Query 558 TCAGAATCAGCTACTCTTCTTTTGGTAACCCGGGAGCTGGAGAATGTCAATCAAGAATTG 617
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 538 TCAGAATCAGCTACTCTTCTTTTGGTAACACAGGAGCTGGAGAATGTCAATCAAGAATTG 597
Query 618 GCTTATGCTAATGACGCCAAGAGTAAGGCTTTGAGTCATGCAGATGATGCTAGTAAGATG 677
||| ||||||| || |||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 598 GCTAATGCTAAAGATGCCAAGAGTAAGGCTTTGTGTCGTGCAGATGATGCTAGTAAGATG 657
Query 678 GTTGCAATTCATGCAGAGAAAGTGGAAATCTTGTCATCAGAGTTAATCCGGTTGAAGGCT 737
| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct 658 GCTGCAATTCATGCAGAGAAAGTTGAAATCTTGTCGTCAGAGTTAATACGGTTGAAGGCT 717
Query 738 TTGCTTGATTCAACTCGAGAGAAGGAAACCATCTCCAAGAATGAGATTGCTTCAAAACTA 797
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct 718 TTGCTTGATTCAACTCGAGAGAAGGAAATCATCTCCAAGAATGAGATTGCTTTAAAGCTA 777
Query 798 GGAGCCGAGATAGTGGATCTAAAAAGAGACCTTGAGAAAGCGACAAGTTTGGAAGCAAAG 857
|| || |||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 778 GGGGCGGAGATAGTGGATCTAAAAAGAGACCTTGAGAATGCGAGAAGTTTGGAAGCAAAG 837
Query 858 GTCAAGGAACTAGAGATGATCATTGAGCAGCTTAATGTTGACTTAGAAGCTGCGAAGATG 917
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 838 GTCAAGGAACTAGAGATGATCATTGAGCAGCTTAATGTTGACTTAGAAGCTGCAAAAATG 897
Query 918 GCAGGATCTTATGCG 932
|||| ||||||||||
Sbjct 898 GCAGAATCTTATGCG 912
> AT5G16730.1 | Symbols: | Plant protein of unknown function (DUF827)
| chr5:5497643-5500845 FORWARD LENGTH=2879
Length=2879
Score = 699 bits (378), Expect = 0.0
Identities = 660/795 (83%), Gaps = 24/795 (3%)
Strand=Plus/Plus
Query 942 GAGAGCTCGAAGGAGGAAGAGGAGAAGAGTAAGAAAGCAATGGAGAGTTTAGCTTCAGCA 1001
|||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1604 GAGAGCTCAAAAGAGGAAGAGGAGAAGAGTAAGAAAGCAATGGAGAGTTTGGCTTCAGCT 1663
Query 1002 TTGCACGAAGTGTCGAGTGAATCACGCGAGTTGAAAGAAAAATTGCTGAGTCAGGGTGAT 1061
||||||||||||||||||||| | | ||||||||||| || ||| ||||||| || |||
Sbjct 1664 TTGCACGAAGTGTCGAGTGAAGGAAGGGAGTTGAAAGAGAAGTTGTTGAGTCAAGGCGAT 1723
Query 1062 CAGGATTATGAAACACAGATAGAAGATCT-GAAGTTGGTCATTAAAGCAACGAACAAGAA 1120
|| || ||||||||||| ||||| || || ||||||||| |||||||| || ||| ||||
Sbjct 1724 CACGAGTATGAAACACAAATAGATGA-CTTGAAGTTGGTGATTAAAGCCACAAACGAGAA 1782
Query 1121 GTATGAGAATATGCTTGATGAGGCGAGACATGAGATCGATGTTCTTGTCAATGCGGTAGA 1180
||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||| ||
Sbjct 1783 GTACGAGAATATGCTTGACGAGGCGAGACATGAGATCGATGTTCTTGTTAGCGCGGTTGA 1842
Query 1181 ACAAACCAAGAAACAGTTCGAAAGCGCAATGGTAG-ATTGGGAGATGAGAGAAGCCGGTT 1239
||||||||||||||| ||||| ||| ||| | || |||||||||||| ||||||| ||
Sbjct 1843 ACAAACCAAGAAACATTTCGAGAGCTCAAAGA-AGGATTGGGAGATGAAAGAAGCCAATT 1901
Query 1240 TGGTGAATCACGTGAAGGAATTTGATGAAGAAGTTTCTTCAATGGGGAAAGAAATGAATA 1299
|||||||| | |||||| || | || ||||| ||| |||| |||||||||||||||||||
Sbjct 1902 TGGTGAATTATGTGAAGAAAATGGAAGAAGATGTTGCTTCGATGGGGAAAGAAATGAATA 1961
Query 1300 GGTTGGGCAATTTGGTTAAAAGGACAAAGGAAGAAGCTGATGCATCATGGGAA-AAAGAA 1358
|| ||| ||| || | || || || |||||||||| |||||| | ||| || ||||||
Sbjct 1962 GGCTGGATAATCTGCTGAAGAGAACCGAGGAAGAAGCCGATGCAGCTTGG-AAGAAAGAA 2020
Query 1359 TCCCAAATGAGAGATAGCCTTAAA-GAAGTGGAAGATGAGGT-GATTTATCTTCAGGAAA 1416
| || | || ||| || ||||| ||||||||||| ||| | | |||||||||||||||
Sbjct 2021 GCACAGACGAAAGACAGT-TTAAAAGAAGTGGAAGAAGAGATTG-TTTATCTTCAGGAAA 2078
Query 1417 CTCTCAGGGAAGCGAAAGCTGAAA-CTTTGAAACTAAAGGGGAAAATGTTGGATAAAGAA 1475
||||| ||||||| |||||||||| | | ||| ||||||| ||| ||||||||||||||
Sbjct 2079 CTCTCGGGGAAGCAAAAGCTGAAAGCAT-GAAGCTAAAGGAGAATCTGTTGGATAAAGAA 2137
Query 1476 ACTGAGTTTCA-AAGCGTTGTTCATGAGAACGATGAACTCAGAGT-GAAACAGGATGATT 1533
||||||||||| || ||| |||| || ||||| || || | || ||| |||||| ||
Sbjct 2138 ACTGAGTTTCAGAA-CGTCATTCACGAAAACGAGGATCTGA-AGGCGAAGGAGGATGTTT 2195
Query 1534 CTCTGAAGAAGATCAAGGAGCTATCGGAGTTACTCGAAGAAGCATTA--G-CCAAGAAAC 1590
|||||||||||||| ||||| ||||| |||||||||| |||||| || | ||||||| |
Sbjct 2196 CTCTGAAGAAGATCGAGGAGTTATCGAAGTTACTCGAGGAAGCAATATTGGCCAAGAAGC 2255
Query 1591 ATACAG-AAGA-G-GAC-GGTGAGCTCAGTGAGAGTGAAAAAGACTATGATTTGCTTCCA 1646
| || | |||| | || || |||||||||||||| || ||||||||||||||||| |||
Sbjct 2256 A-ACCGGAAGAAGAGAATGGCGAGCTCAGTGAGAGCGAGAAAGACTATGATTTGCTACCA 2314
Query 1647 AAGGTGGTCGAGTTTTCTGAGGAAAATGGTTATAGAAATGCAGAAGAGAAGTCTTCTAAA 1706
|| ||||| ||||||||| || || ||| |||||| || ||||||||| ||| |||||
Sbjct 2315 AAAGTGGTTGAGTTTTCTTCTGAGAACGGTCATAGAAGTGTAGAAGAGAAATCTGCTAAA 2374
Query 1707 GTAAAAACCCTCGAT 1721
|| ||||||| |||
Sbjct 2375 GTCGAAACCCTTGAT 2389
Score = 108 bits (58), Expect = 3e-22
Identities = 216/286 (76%), Gaps = 35/286 (12%)
Strand=Plus/Plus
Query 1794 GTTGAAGTTGAGT-TT-AAAATGTGGGAAAGTTGTCAGATTGAGAAGAAAGAAG-TTTTC 1850
||||||||| | | || ||||||||||||||||| || || ||||||||||||| |||||
Sbjct 2534 GTTGAAGTT-A-TATTCAAAATGTGGGAAAGTTGCCAAATCGAGAAGAAAGAAGCTTTTC 2591
Query 1851 C--ACAAGGGAAAACCAGAACAAGAGTCTGCAA-AAGAAGTAGAGG----AAGACTTAAA 1903
| |||| | ||| |||||| |||||| ||| |||||| ||||| ||| | |||
Sbjct 2592 CGGACAA--G-AAATCAGAACTAGAGTC-ACAAGAAGAAGAAGAGGATTCAAG-C-AAAA 2645
Query 1904 -CG-TGATA--GACCAAA--GC--CAGAAAACCTC---G---CCTGTAAATGGATTAACC 1949
|| ||| | ||| ||| | |||| ||| || | || | ||| | ||||||
Sbjct 2646 TCGATGAAAGCGACAAAACCTCAACAGAGAACATCGATGAAACC-GGAAACGCTTTAACC 2704
Query 1950 GGagaagatgaactggtgaaggaacaggaa-aagaagaagaagaagaCATTGTTTGGTAA 2008
| ||||||| | || || || | | ||| | |||||||||||||| || |||||||
Sbjct 2705 GCAGAAGATCAGCTTACGATGG-AGAAGAAGATCAAGAAGAAGAAGACTTTACTTGGTAA 2763
Query 2009 AGTTGGGAATCTTCTCAAGAAGAAAGGACCCGTGAATCAGAAATAA 2054
|||||||||||||||||||||||||| ||| || || |||||||||
Sbjct 2764 AGTTGGGAATCTTCTCAAGAAGAAAGCACCTGTAAACCAGAAATAA 2809
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102810716160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5