BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg927809

Length=427
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G03500.1 | Symbols:  | TatD related DNase | chr3:832929-8343...   198    3e-50


> AT3G03500.1 | Symbols:  | TatD related DNase | chr3:832929-834350 
FORWARD LENGTH=819
Length=819

 Score =  198 bits (107),  Expect = 3e-50
 Identities = 113/116 (97%), Gaps = 0/116 (0%)
 Strand=Plus/Plus

Query  291  CTAGATTATGTTGCGAACCTGTCAAACATGAAGAAGGAAGAGCTTGCGGAGTTAAGTTAT  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  703  CTAGATTATGTTGCGAACCTGTCAAACATGAAGAAGGAAGAGCTTGCGGAGTTAAGTTAT  762

Query  351  GTGAATTCTGTGAGGTTGTTTTCTTATACAGGTTCTAAATTTCTTACAGACCAGTA  406
            ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||
Sbjct  763  GTGAATTCTGTGAGGTTGTTTTCTTATCCAGGTTCCAAATTGCTTACAGACCAGTA  818



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 20257902847


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5