BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg927817
Length=3276
Score E
Sequences producing significant alignments: (Bits) Value
AT3G03110.1 | Symbols: XPO1B, CRM1B | exportin 1B | chr3:708936... 5529 0.0
AT5G17020.1 | Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | expo... 3169 0.0
> AT3G03110.1 | Symbols: XPO1B, CRM1B | exportin 1B | chr3:708936-717093
FORWARD LENGTH=3475
Length=3475
Score = 5529 bits (2994), Expect = 0.0
Identities = 3175/3264 (97%), Gaps = 6/3264 (0%)
Strand=Plus/Plus
Query 3 GAATTTGCGAATCTTCTCCGCCATGGCTGCCGAGAAGTTAAGAGACTTGAGTCAGCCGAT 62
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 GAATTTGCGCATCCTCTCCGCCATGGCTGCCGAGAAGTTAAGAGACTTGAGTCAGCCGAT 68
Query 63 TGACGTCGTTTTACTCGATGCCACTGTTGAGGCCTTTTACGCTACCGGATCTAAGGAAGA 122
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 69 TGACGTCGTTTTACTCGATGCCACTGTTGAGGCCTTTTACTCTACCGGATCTAAGGAAGA 128
Query 123 AAGAGCTTCTGCGGATACTATCTTGCGGGATTTGAAAGCTAATCCGGATACTTGGCTTCA 182
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 129 AAGAGCTTCTGCGGATAATATCTTGCGGGATTTGAAAGCTAATCCTGATACTTGGCTTCA 188
Query 183 AGTGGTTCACATTCTACAGAACACCAGTAGTACACATACAAAATATTTTGCCCTTCAGGT 242
||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct 189 AGTTGTTCACATTCTACAGAACACCAGTAGTACGCATACCAAATTTTTTGCCCTTCAGGT 248
Query 243 GCTAGAAGGTGTTATAAAGTATAGGTGGAATGCATTACCCGTTGAACAACGTGATGGAAT 302
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 249 GCTGGAAGGTGTTATAAAATATAGGTGGAATGCATTACCCGTTGAACAACGTGATGGAAT 308
Query 303 GAAAAATTACATCTCTGATGTCATTGTGCAGCTCTCAAGGGATGAAGCATCTTTCAGAAC 362
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 309 GAAAAATTACATCTCTGATGTCATTGTGCAGCTGTCAAGGGATGAAGCATCTTTCAGAAC 368
Query 363 GGAAAGGCTTTATGTCAACAAGTTAAATGTCATCCTGGTTCAGATCGTGAAACATGAGTG 422
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 369 GGAAAGGCTTTATGTCAACAAGTTAAATATCATCCTGGTTCAGATCGTGAAACAGGAGTG 428
Query 423 GCCGGCAAAGTGGAAAAGCTTTATTCCTGACCTAGTTATAGCTGCAAAGACTAGTGAAAC 482
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 429 GCCGGCAAAGTGGAAAAGCTTTATTCCTGATTTAGTTATAGCTGCTAAGACTAGTGAAAC 488
Query 483 TATCTGTGAGAATTGCATGGCCATTTTGAAACTCCTAAGTGAAGAGGTCTTTGATTTCTC 542
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 489 TATCTGTGAGAATTGCATGGCTATTTTGAAACTCCTAAGTGAAGAGGTCTTTGATTTCTC 548
Query 543 AAGAGGAGAGATGACTCAGCAAAAGATAAAAGAACTGAAACAGTCTCTAAACAGCGAGTT 602
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 AAAAGGAGAGATGACTCAGCAAAAGATAAAAGAACTGAAACAGTCTCTAAACAGCGAGTT 608
Query 603 TCAACTCATCCACGAGTTATGCCTATATGTCCTCTCAGCTTCCCAAAGACAAGAACTTAT 662
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 609 TCAACTCATTCACGAGTTATGCCTATATGTCCTCTCAGCTTCCCAAAGACAAGAGCTTAT 668
Query 663 ACGTGCAACACTCTCTGCATTGCATGCCTATCTTTCTTGGATTCCGTTGGGATACATATT 722
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 ACGTGCTACACTCTCTGCATTGCATGCCTATCTTTCTTGGATTCCGTTGGGATACATATT 728
Query 723 TGAGTCCCCTTTGCTGGAGACCCTACTTAAATTCTTCCCTGTTCCAGCATATAGGAATCT 782
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 729 TGAGTCCCCTTTGCTGGAGATCCTACTTAAATTCTTCCCTGTTCCAGCATATAGGAATCT 788
Query 783 CACACTTCAATGTCTGTCAGAGGTTGCATCTCTCAATTTTGGGGACTTCTACAATGTGCA 842
||||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||
Sbjct 789 CACACTTCAATGTTTGTCAGAGGTTGCATCTCTTAATTTTGGGGACTTCTACGATATGCA 848
Query 843 ATATGTCAAGATGTACAGCATTTTCATGAATCAGTTGCAGGCAATTCTCCCTATAAATTT 902
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 849 ATATGTCAAGATGTACAGCATTTTCATGAATCAGTTGCAGGCAATTCTCCCTTTAAATTT 908
Query 903 AAATATCCCTGAGGCATATTCAACTGGAAGTAGTGAAGAACAGGCTTTTATCCAGAACTT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 AAATATCCCTGAGGCATATTCAACTGGAAGTAGTGAAGAACAGGCTTTTATCCAGAACTT 968
Query 963 GGCACTGTTTTTCACTTCGTTTTTCAAGTTACATATAAAAATCCTAGAATCTGCACCCGA 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 969 GGCACTGTTTTTCACTTCGTTTTTCAAGTTACATATAAAAATCCTAGAATCTGCACCCGA 1028
Query 1023 GAATATTTCTCTATTACTTGCGGGTCTGGGATATCTCATTAGCATATCATATGTTGATGA 1082
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1029 AAATATTTCTCTATTACTTGCGGGTCTGGGATATCTCATTAGCATATCGTATGTTGATGA 1088
Query 1083 CACTGAAGTATTCAAGGTTTGTTTGGACTATTGGAATTCATTAGTTTTGGAGTTGTTTGG 1142
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1089 CACTGAAGTATTCAAGGTTTGTTTGGACTATTGGAATTCATTAGTGTTGGAGTTGTTTGG 1148
Query 1143 GGCGCAACATCATGCTG-GTCACCCTGCACTAACTCCAACTCTGTTTGGATTGCAAATGT 1201
| ||| ||||||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1149 GACGCGACATCATGC-GTGTCACCCTGCACTAACTCCAAGTCTGTTTGGATTGCAAATGG 1207
Query 1202 CTTTCCTTCCTA-TCACAGTTGATGGTGTTAAACCTGAAGTGACGGAGCGGCATCAACTT 1260
|||||||||||| | |||||||||||||||||| ||||||| || |||||||| |||||
Sbjct 1208 CTTTCCTTCCTAGT-ACAGTTGATGGTGTTAAATCTGAAGTCACTGAGCGGCAAAAACTT 1266
Query 1261 TATTCAGATCCAATGTCAAAATTAAGGGGACTCATGATTAGTCGCATGGCTAAGCCTGAA 1320
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1267 TATTCAGATCCAATGTCAAAATTAAGGGGACTCATGATTAGTCGCACGGCTAAGCCTGAA 1326
Query 1321 GAAGTGTTAATTGTTGAGGACGAAAATGGGAACATTGTCCGTGAAACTATGAAGGATAAT 1380
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1327 GAAGTGTTAATTGTTGAGGACGAAAATGGGAACATTGTTCGTGAAACTATGAAGGATAAT 1386
Query 1381 GATGTTCTTGTCCAGTATAAGATAATGCGAGAGACATTAATCTACCTCTCACATCTTGAT 1440
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1387 GATGTTCTTGTCCAGTATAAGATAATGCGGGAGACATTAATCTACCTCTCACACCTTGAT 1446
Query 1441 CATGAAGATACCGAAAAACAGATGTTGAGTAAGCTAAGCAAACAGTTGAGTGGAGAGGAA 1500
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1447 CATGAAGATACCGAAAAACAGATGTTGAGTAAGCTAAGCAAACAGTTGAGCGGGGAGGAA 1506
Query 1501 TGGGCATGGAACAATCTGAACACTTTATGCTGGGCGATTGGGTCTATTTCTGGGTCCATG 1560
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1507 TGGGCATGGAACAATCTAAACACTTTATGCTGGGCTATTGGGTCTATTTCTGGGTCCATG 1566
Query 1561 GTAGTAGAACAGGAAAACAGATTTCTCGTGATGGTTATCCGTGATTTGTTAAGTTTATGT 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 GTAGTAGAACAGGAAAACAGATTTCTCGTGATGGTTATCCGTGATTTGTTAAGTTTATGT 1626
Query 1621 GAAGTCGTCAAGGGAAAAGACAATAAAGCTGTTATTGCGAGCAACATCATGTATGTTGTT 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1627 GAAGTCGTCAAGGGAAAAGACAATAAAGCTGTTATTGCGAGCAACATCATGTACGTTGTT 1686
Query 1681 GGACAATATTCAAGATTCTTAAGAGCCCATTGGAAGTTTTTGAAGACAGTTGTCCATAAG 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 GGACAATATTCAAGATTCTTAAGAGCCCATTGGAAGTTTTTGAAGACAGTTGTCCATAAG 1746
Query 1741 TTGTTTGAGTTTATGCATGAGACGCATCCTGGTGTTCAGGACATGGCTTGTGACACATTC 1800
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1747 CTGTTTGAATTTATGCATGAGACGCATCCTGGTGTTCAGGACATGGCTTGCGACACATTC 1806
Query 1801 TTAAAAATTGTTCAGAAGTGTAAGCGAAAATTCGTTATTGTTCAGGTTGGAGAAAGTGAG 1860
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1807 TTAAAAATTGTTCAGAAGTGTAAGCGAAAATTTGTTATTGTTCAGGTTGGAGAAAGTGAG 1866
Query 1861 CCATTTGTATCTGAACTTCTATCAGGCCTTGCTACAATCGTCGGAGATCTTCAACCTCAT 1920
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1867 CCATTTGTGTCTGAACTTCTATCAGGCCTTGCTACAATCGTCGGAGATCTTCAACCTCAT 1926
Query 1921 CAGATTCATACATTTTATGAATCTGTTGGTAGTATGATCCAGGCAGAATCAGATCCTCAG 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 CAGATTCATACATTTTATGAATCTGTTGGTAGTATGATCCAGGCAGAATCAGATCCTCAG 1986
Query 1981 AAGAGGGGGGAATACCTCCAGAGGTTGATGGCTCTCCCGAATCAGAAATGGGCAGAAATT 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 AAGAGGGGGGAATACCTCCAGAGGTTGATGGCTCTCCCGAATCAGAAATGGGCAGAAATT 2046
Query 2041 ATAGGACAAGCACGTCAAAGTGCAGATATCCTCAAGGACCCAGATGTGATACGTACTGTG 2100
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2047 ATAGGACAAGCACGTCAAAGTGCAGATATCCTCAAGGAACCAGATGTGATACGTACTGTG 2106
Query 2101 CTTAATATTCTCCAGACAAATACGCGCGTTGCAACTTCATTAGGAACATTCTTCCTCTCT 2160
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 2107 CTTAATATCCTCCAGACAAATACGCGCGTTGCAACTTCACTAGGAACATTCTTCCTGTCT 2166
Query 2161 CAAATTTCGTTGATCTTCTTGGATATGCTGAATGTTTACAGAATGTATAGTGAACTCGTT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2167 CAAATTTCGTTGATCTTCTTGGATATGCTGAATGTTTACAGAATGTATAGTGAACTCGTT 2226
Query 2221 TCAAGCAGCATCGCTAATGGTGGCCCATACGCTTCGAGAACATCTCTTGTTAAACTTTTA 2280
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2227 TCAAGCAGCATTGCTAATGGTGGCCCATACGCTTCGAGAACATCTCTTGTTAAACTTTTA 2286
Query 2281 AGGTCTGTTAAGAGGGAAATCCTTAAGCTGATAGAGACGTTTTTAGACAAAGCTGAAAAC 2340
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2287 AGGTCTGTTAAGAGGGAAATTCTTAAGCTGATAGAGACGTTTTTAGATAAAGCTGAAAAC 2346
Query 2341 CAGCCACACATTGGAAAACAGTTTGTCCCACCAATGATGGATCAAGTACTTGGCGACTAT 2400
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2347 CAGCCACACATTGGAAAACAGTTTGTTCCACCAATGATGGATCAAGTACTTGGCGACTAT 2406
Query 2401 GCAAGAAATGTTCCTGATGCAAGAGAATCAGAAGTCTTATCACTCTTTGCGACAATAATA 2460
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2407 GCAAGAAATGTTCCTGATGCAAGAGAATCAGAAGTCTTGTCACTCTTTGCGACAATAATC 2466
Query 2461 AACAAGTACAAGGTTGTAATGCGAGATGAAGTTCCCCTCATATTTGAAGCTGTTTTCCAG 2520
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2467 AACAAATACAAGGTTGTAATGCGAGATGAAGTTCCCCTCATATTTGAAGCTGTTTTCCAG 2526
Query 2521 TGCACATTGGAGATGATTACTAAGAATTTTGAAGATTACCCAGAGCACCGTCTCAAGTTT 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2527 TGCACATTGGAGATGATTACTAAGAATTTTGAAGATTACCCAGAGCACCGTCTCAAGTTT 2586
Query 2581 TTCTCGTTACTTCGTGCTATTGCTACATTTTGTTTCCGTGCGTTGATACAGTTGTCAAGT 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2587 TTCTCGTTACTTCGTGCTATTGCTACATTTTGTTTCCGTGCGTTGATACAGTTGTCAAGT 2646
Query 2641 GAGCAACTGAAGCTAGTGATGGATTCAGTTATCTGGGCATTTAGGCATACCGAAAGAAAT 2700
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2647 GAGCAACTGAAGCTAGTGATGGATTCAGTTATCTGGGCATTTAGGCATACTGAAAGAAAT 2706
Query 2701 ATCGCTGAAACTGGGCTCAATCTCTTGCTCGAGATGCTGAAAAACTTTCAGAAATCTGAC 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2707 ATCGCTGAAACTGGGCTCAATCTCTTGCTCGAGATGCTGAAAAACTTTCAGAAATCTGAC 2766
Query 2761 TTCTGTAACAAATTCTACCAAGCATACTTTCTACAAATTGAGCAAGAAGTATTTGCTGTT 2820
|| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 2767 TTTTGTAACAAATTCTACCAAACATACTTTCTGCAAATTGAGCAAGAAGTATTTGCTGTC 2826
Query 2821 TTGACCGATACCTTCCATAAGCCTGGGTTCAAGTTGCATGTGTTGGTGCTGCAGCACTTA 2880
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 2827 TTGACCGATACCTTCCACAAGCCTGGGTTCAAGTTGCATGTGTTGGTGTTGCAGCACTTA 2886
Query 2881 TTTAGCCTGGTTGAGAGTGGATCATTGACAGAACCATTGTGGGATGATGCAACGGTAACC 2940
||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||
Sbjct 2887 TTTAGCCTGGTTGAGAGCGGATCATTGGCAGAACCATTGTGGGATGCTGCAACGGTA-CC 2945
Query 2941 -CATCCTTATCCAAATAATGTCGCCTTTGTACTTGAGTACACCACCAAGCTTCTAAGCTC 2999
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2946 GCATCCTTATTCAAATAATGTCGCCTTTGTGCTTGAGTACACCACCAAGCTTCTAAGCTC 3005
Query 3000 ATCATTCCCTAACATGACTACAACAGAGGTGACACAATTTGTGAATCGACTTTACGAGTC 3059
||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 3006 ATCATTCCCCAACATGACTACAACAGAGGTGACACAGTTTGTGAATGGACTTTACGAGTC 3065
Query 3060 GAGAAACGATGTTGGCAGATTTAAGGATAACATACGCGACTTCCTTGTACAGTCCAAGGA 3119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3066 GAGAAACGATGTTGGCAGATTTAAGGATAACATACGCGACTTCCTTATACAGTCCAAGGA 3125
Query 3120 ATTTTCTGCTCAGGATAACAAAGATTTATATGCTGAGGAAGCTGCTGCACAAATGgagag 3179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3126 ATTTTCTGCTCAGGATAACAAAGATTTATATGCTGAGGAAGCTGCTGCCCAAATGGAGAG 3185
Query 3180 agagagaCAAAGAATGCTTTCGATTCCTGGACTTATAGCTCCCAGCGAAATTCAAGACGA 3239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3186 AGAGAGACAAAGAATGCTTTCGATTCCTGGACTTATAGCTCCCAGCGAAATTCAAGACGA 3245
Query 3240 CATGGCTGATTCTTAAGTCTTGTT 3263
|||||| |||||||||||||||||
Sbjct 3246 CATGGCCGATTCTTAAGTCTTGTT 3269
> AT5G17020.1 | Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | exportin
1A | chr5:5594736-5602955 FORWARD LENGTH=3884
Length=3884
Score = 3169 bits (1716), Expect = 0.0
Identities = 2767/3272 (85%), Gaps = 82/3272 (3%)
Strand=Plus/Plus
Query 13 ATCT-TCTCCGCCATGGCTGCCGAGAAGTTAAGAGACTTGAGTCAGCCGATTGACGTCGT 71
|||| |||| |||||||| || ||||||||||| |||||||| ||||||||||||||||
Sbjct 156 ATCTCTCTCTGCCATGGCGGCTGAGAAGTTAAGGGACTTGAGCCAGCCGATTGACGTCGG 215
Query 72 TTTACTCGATGCCACTGTTGAGGCCTT-TTACGCTACCGGATCTAAGGAAGAAAGAGCTT 130
| | |||||||||||||||| |||||| || | |||||||||||| ||||| ||||||
Sbjct 216 TGTGCTCGATGCCACTGTTGCGGCCTTCTT-TGTTACCGGATCTAAAGAAGAGAGAGCTG 274
Query 131 CTGCGGATAC-TATCTTGCGGGATTTGAAAGCTAATCCGGATACT-TGGCTTCAAGTGGT 188
||||||| | || |||||||||||| | |||||||| |||| | ||||||||||| ||
Sbjct 275 CTGCGGA-CCAGATTTTGCGGGATTTGCAGGCTAATCCAGATA-TGTGGCTTCAAGTTGT 332
Query 189 TCACATTCTACAGAACACCAGTAG-TACACATACAAAATAT-TTTGCCCTTCAGGTGCTA 246
||||||||||| || || | || | |||| || | | ||||| || ||||| |||
Sbjct 333 CCACATTCTACAAAATACAAACAGCT-TGGATACCAAGT-TCTTTGCTCTGCAGGTTCTA 390
Query 247 GAAGGTGTTATAAAGTATAGGTGGAATGCATTACCCGTTGAACAACGTGATGGAATGAAA 306
|||||||||||||||||||| ||||||||| | || ||||||||||| ||||||||||||
Sbjct 391 GAAGGTGTTATAAAGTATAGATGGAATGCACTGCCTGTTGAACAACGAGATGGAATGAAA 450
Query 307 AATTACATCTCTGATGTCATTGTGCAGCTCTCAAGGGATGAAGCATCTTTCAGAACGGAA 366
||||||||||| || || ||||| |||||||| || ||||||||||||||||| | |||
Sbjct 451 AATTACATCTCAGAGGTTATTGTACAGCTCTCGAGTAATGAAGCATCTTTCAGATCAGAA 510
Query 367 AGGCTTTATGTCAACAAGTTAAATGTCATCCTGGTTCAGATCGTGAAACATGAGTGGCCG 426
||||| |||||||||||| |||||||||| |||| ||||||||||||||||| ||||||
Sbjct 511 AGGCTCTATGTCAACAAGCTAAATGTCATTTTGGTCCAGATCGTGAAACATGATTGGCCG 570
Query 427 GCAAAGTGGAAAAGCTTTATTCCTGACCTAGTTATAGCTGC-AAAGACTAGTGAAACTAT 485
|||||||||| |||||| |||||||| |||||| |||||| ||| ||||| ||||||||
Sbjct 571 GCAAAGTGGACAAGCTTCATTCCTGATCTAGTTGCAGCTGCTAAA-ACTAGCGAAACTAT 629
Query 486 CTGTGAGAATTGCATGGCCATTTTGAAACTCCTAAGTGAAGAGGTCTTTGATTTCTCAAG 545
||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 630 CTGCGAAAATTGCATGGCCATTTTGAAACTCCTAAGTGAAGAGGTTTTTGATTTCTCAAG 689
Query 546 AGGAGAGATGACTCAGCAAAAGATAAAAGAACTGAAACAGTCTCTAAACAGCGAGTTTCA 605
|||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct 690 AGGAGAAATGACTCAGCAGAAGATTAAAGAGCTGAAACAATCTCTAAACAGTGAGTTTAA 749
Query 606 ACTCATCCACGAGTTATGCCTATATGTCCTCTCAGCTTCCCAAAGACAAGAACTTATACG 665
|||||| || ||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct 750 ACTCATTCATGAGTTATGCCTATATGTCCTCTCAGCTTCTCAAAGACAGGATCTTATACG 809
Query 666 TGCAACACTCTCTGCATTGCATGCCTATCTTTCTTGGATTCCGTTGGGATACATATTTGA 725
||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct 810 TGCAACACTGTCTGCATTGCATGCCTATCTTTCCTGGATTCCATTGGGTTACATTTTTGA 869
Query 726 GTCCCCTTTGCTGGAGACCCTACTTAAATTCTTCCCTGTTCCAGCATATAGGAATCTCAC 785
||| ||||||| |||||||| |||||||| || ||||| |||||||||||||| |||||
Sbjct 870 GTCTACTTTGCTTGAGACCCTCCTTAAATTTTTTCCTGTGCCAGCATATAGGAACCTCAC 929
Query 786 -ACTTCAATGTCTGTCAGAGGTTGCATCTCTCAATTTTGGGGACTTCTACAATGTGCAAT 844
| ||||||||||| | ||||| ||| |||| ||||| ||||||||||||||||| ||||
Sbjct 930 TA-TTCAATGTCTGACCGAGGTCGCAGCTCTTAATTTCGGGGACTTCTACAATGTTCAAT 988
Query 845 ATGTCAAGATGTACAGCAT-TTTCAT-GAATCAGTTGCAGGC-AATTCTCCCTATAAATT 901
||||||| ||||| | ||| ||| || | ||| ||| || ||||||||| | | |
Sbjct 989 ATGTCAAAATGTATACCATATTT-ATAGGG-CAGCTGC-GGATAATTCTCCC-ACCGAGT 1044
Query 902 T-AAATATCCCTGAGGCATATTCAACTGGAAGTAGTGAAGAACAGGCTTTTATCCAGAAC 960
||| ||||||||||||||||| | ||||||| |||||||||| || ||||||||||||
Sbjct 1045 ACAAAGATCCCTGAGGCATATTCCAGTGGAAGTGGTGAAGAACAAGCATTTATCCAGAAC 1104
Query 961 TTGGCACTGTTTTTCACTTCGTTTTTCAAGTTACATATAAAAATCCTAGAATCTGCACCC 1020
||||||| ||||||||||| ||||||||||| ||||| | |||||||||| | ||
Sbjct 1105 CTGGCACTATTTTTCACTTCCTTTTTCAAGTTTCATATTCGAGTCCTAGAATCAACGCC- 1163
Query 1021 GAGAATATT-TCTCTAT-T-ACTTGCGGGTCTGGGATATCTCATTAGCATATCATATGTT 1077
|||| || ||||| | | ||| || ||||| | ||||||||||| ||||| ||||||
Sbjct 1164 -AGAAG-TTGTCTCTTTGTTACTCGCTGGTCTAGAATATCTCATTAATATATCTTATGTT 1221
Query 1078 GATGACACTGAAGTATTCAAGGTTTGTTTGGACTATTGGAATTCATTAGTTTTGGAGTTG 1137
|| |||||||||||||| ||||||||||||||||||||||| || || || |||||| |
Sbjct 1222 GACGACACTGAAGTATTTAAGGTTTGTTTGGACTATTGGAACTCGTTGGTGTTGGAGCTA 1281
Query 1138 TTTGGGGCGCAACATCATGCTGGTCACCCTGCACTAACTCCAA-CTCTGTTTGGATTGCA 1196
|||| ||||| ||| || ||| | |||||||| ||| | ||| | ||| | || |||||
Sbjct 1282 TTTGATGCGCATCATAATTCTGATAACCCTGCAGTAAGTGCAAGC-CTGATGGGTTTGCA 1340
Query 1197 AATGTCTTTCCTTCCTA-TCACAGTTGATGGTGTTAAACCTGAAGTGACGGAGCGGCATC 1255
| ||||||||||| | | |||||||| || || |||| | | |||||| ||
Sbjct 1341 ---GCCTTTCCTTCCTGGT-ATGGTTGATGGCCTTGGTTCTCAAGTCATGCAGCGGCGTC 1396
Query 1256 AACTTTATTCAGATCCAATGTCAAAATTAAG-GGGACTCATGATTAGTCGCATGGCTAAG 1314
|||||||||| | |||||||| |||||||| ||| | ||||||| |||||||| |||
Sbjct 1397 AACTTTATTCTCACCCAATGTCCAAATTAAGAGGGT-TAATGATTAACCGCATGGCGAAG 1455
Query 1315 CCTGAAGAAGTG-TTAATTGTTGAGGACGAAAATGGGAACATTGTCCGTGAAACTATGAA 1373
|||||||||||| ||| ||||||| || |||||||||||||| || |||||||| |||||
Sbjct 1456 CCTGAAGAAGTGCTTA-TTGTTGAAGATGAAAATGGGAACATCGTTCGTGAAACCATGAA 1514
Query 1374 GGATAATGATGTTCTTGTCCAGTATAAGATAATGCGAGAGACATTAATCTACCTCTCACA 1433
||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1515 GGACAATGATGTTCTTGTCCAATATAAGATAATGCGGGAGACATTAATCTACCTCTCACA 1574
Query 1434 TCTTGATCATGAAGATACCGAAAAACAGATGTTGAGTAAGCTAAGCAAACAGTTGAGTGG 1493
||||| ||||| |||||||| || ||||||||||| ||||||| |||||| || |||||
Sbjct 1575 CCTTGACCATGATGATACCGAGAAGCAGATGTTGAGGAAGCTAAACAAACAATTAAGTGG 1634
Query 1494 AGAGGAATGGGCATGGAACAATCTGAACACTTTATGCTGGGCGATTGGGTCTATTTCTGG 1553
||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||
Sbjct 1635 GGAGGAATGGGCATGGAACAATTTGAACACTTTGTGCTGGGCTATTGGGTCTATTTCCGG 1694
Query 1554 GTCCATGGTAGTAGAACAGGAAAACAGATTTCTCGTGATGGTTATCCGTGATTTGTT-AA 1612
|| |||| || ||| ||||||||||| ||| | |||||||| || ||||||||||| ||
Sbjct 1695 ATCTATGGCAGAAGATCAGGAAAACAGGTTTTTGGTGATGGTCATTCGTGATTTGTTGAA 1754
Query 1613 GTTTATGTGAAGTCGTCAAGGGAAAAGACAATAAAGCTGTTATTGCGAGCAACATCATGT 1672
|||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1755 -TTTATGTGAAATTACCAAGGGAAAAGACAATAAAGCCGTTATTGCAAGCAACATCATGT 1813
Query 1673 ATGTTGTTGGACAATATTCAAGATTCTTAAGAGCCCATTGGAAGTTTTTGAAGACAGTTG 1732
|||| ||||| || ||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1814 ATGTCGTTGGCCAGTATCCAAGATTCTTAAGGGCCCATTGGAAGTTTTTGAAGACAGTTG 1873
Query 1733 TCCATAAGTTGTTTGAGTTTATGCATGAGACGCATCCTGGTGTTCAGGACATGGCTTGTG 1792
| | ||||||||||| || |||||||| || ||||||||||||||||||||||| ||||
Sbjct 1874 TGAACAAGTTGTTTGAATTCATGCATGAAACACATCCTGGTGTTCAGGACATGGCCTGTG 1933
Query 1793 ACACATTCTTAAAAATTGTTCAGAAGTGTAAGCGAAAATTCGTTATTGTTCAGGTTGGAG 1852
| |||||||| ||||| ||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct 1934 ATACATTCTTGAAAATAGTTCAAAAGTGCAAGCGAAAATTCGTTATTGTACAGGTTGGAG 1993
Query 1853 A-AAGTGAGCCATTTGTATCTGAACTTCTATCAGGCCTTGCTACAA-TCGT-CGGAGATC 1909
| || ||| ||||||||||||||||||||| |||||||||| |||| | || | |||||
Sbjct 1994 AGAA-TGAACCATTTGTATCTGAACTTCTAACAGGCCTTGCAACAACT-GTTCA-AGATC 2050
Query 1910 TTCAACCTCATCAGATTCA-TACATTTTATGAATCTGTTGGTAGTATGATCCAGGCAGAA 1968
|| | |||||||| || || | ||||||||||||| ||||||| ||||||||| ||||||
Sbjct 2051 TTGAGCCTCATCAAATACACT-CATTTTATGAATCAGTTGGTAATATGATCCAAGCAGAA 2109
Query 1969 TCAGATCCTCAGAAGAGGGGGGAATACCTCCAGAGGTTGATGGCTCTCCCGAATCAGAAA 2028
||||||||||||||||| | ||||| ||||||||||||||||| ||||| || ||||||
Sbjct 2110 TCAGATCCTCAGAAGAGAGATGAATATCTCCAGAGGTTGATGGCACTCCCCAACCAGAAA 2169
Query 2029 TGGGCAGAAATTATAGGACAAGCACGTCAAAGTGCAGATAT-CCTCAAGGACCCAGATGT 2087
||||||||||| |||||||| ||||| || |||| ||| || ||||||||| | || |||
Sbjct 2170 TGGGCAGAAATCATAGGACAGGCACGCCACAGTGTAGA-ATTCCTCAAGGATCAAGTTGT 2228
Query 2088 GATACGTACTGTGCTTAATATTCTCCAGACAAATACGCGCGTTGCAACTTCATTAGGAAC 2147
||||||||| ||||| || || || ||||| ||||| | | ||| |||||| | |||||
Sbjct 2229 GATACGTACAGTGCTAAACATCCTACAGACTAATACTAGTGCTGCTACTTCACTGGGAAC 2288
Query 2148 ATTCTTCCTCTCTCAAATTTCGTTGATCTTCTTGGATATGCTGAATGTTTACAGAATGTA 2207
|| |||| | || |||||||| ||||| |||||||||||| ||||||| |||||||||||
Sbjct 2289 ATACTTCTTATCCCAAATTTCCTTGATTTTCTTGGATATGTTGAATGTATACAGAATGTA 2348
Query 2208 TAGTGAACTCGTTTCAAGCAGCATCGCTAATGGTGGCCCATACGCTTCGA-GAACATCTC 2266
||||| || || |||| || ||| || | || || ||||| ||||| | || |||||
Sbjct 2349 CAGTGAGCTTGTGTCAACCAACATTACTGAGGGAGGACCATATGCTTCCAAGA-CATCTT 2407
Query 2267 TTGTTAAACTTTTAAGGTCTGTTAAGAGGGAAATC-CTTAAGCTGATAGAGACGTTTTTA 2325
|||| ||||| ||||| || ||||||||||||| | |||||||||||||| || ||||||
Sbjct 2408 TTGTAAAACTCTTAAGATCGGTTAAGAGGGAAA-CACTTAAGCTGATAGAAACCTTTTTA 2466
Query 2326 GACAAAGCTGAAAACCAGCCACACATTGGAAAACAGTTTGTCCCACCAATGATGGA-TCA 2384
|||||||||||| ||||||||||||| || ||||| ||||| || ||||||||||| |||
Sbjct 2467 GACAAAGCTGAAGACCAGCCACACATAGGGAAACAATTTGTGCCGCCAATGATGGAATCA 2526
Query 2385 AGTACTTGGCGACTATGCAAGAAATGTTCCTGATGCAAGAGAATCAGAAGT-CTTATCAC 2443
|||||||| |||||||| || ||||| |||||||| || ||||| ||||| ||| ||||
Sbjct 2527 -GTACTTGGTGACTATGCGAGGAATGTGCCTGATGCTAGGGAATCCGAAGTTCTT-TCAC 2584
Query 2444 TCTTTGCGACAATAATAAACAAGTACAAGGTTGTAATGCGAGATGAAGTTCCCCTCATAT 2503
||||||| || || |||||||||||||||| |||| ||| || || || | |||||
Sbjct 2585 TCTTTGCAACGATTATAAACAAGTACAAGGCAACAATGTTAGACGACGTGCCTCACATAT 2644
Query 2504 TTGAAGCTGTTTTCCAGTGCACATTGGAGATGATTACTAAGAATTTTGAAGATTACCCAG 2563
|||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct 2645 TTGAAGCTGTATTCCAGTGTACATTGGAGATGATAACTAAGAACTTTGAAGATTATCCAG 2704
Query 2564 AGCACCGTCTCAAGTTTTTCTCGTTACTTCGTGCTATTGCTACATTTTGTTTCCGTGCGT 2623
| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||| ||| |
Sbjct 2705 AACACCGCCTCAAGTTTTTCTCATTACTCCGTGCTATTGCTACGTTTTGTTTCCCTGCCT 2764
Query 2624 TGATACAGTTGTCAAGTGAGCAACTGAAGCTAGTGATGGATTCAGTTATCTGGGCATTTA 2683
||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 2765 TGATAAAGTTATCAAGTCCGCAACTGAAGCTAGTGATGGATTCAATTATCTGGGCATTTA 2824
Query 2684 GGCATACCGAAAGAAATATCGCTGAAACTGGGCTCAATCTCTTGCTCGAGATGCTGAAAA 2743
| ||||| || |||||||| |||||||| ||||| ||||| ||||| |||||||||||||
Sbjct 2825 GACATACTGAGAGAAATATTGCTGAAACCGGGCTTAATCTTTTGCTTGAGATGCTGAAAA 2884
Query 2744 ACTTTCAGAAATCTGACTTCTGTAA-CAAATTCTACCAAG-CATACTTTCTACAAATTGA 2801
|||||||| ||||||| || ||||| ||| ||||||| | |||||||| | ||||| ||
Sbjct 2885 ACTTTCAGCAATCTGAATTTTGTAATCAA-TTCTACCG-GTCATACTTTATGCAAATCGA 2942
Query 2802 GCAAGAAGTATTTGCTGTTTTGACCGATACCTTCCATAAGCCTGGGTTCAAGTTGCATGT 2861
||||||| ||||||| ||||||||||||||||||||||||||||| |||||| | |||||
Sbjct 2943 GCAAGAAATATTTGCCGTTTTGACCGATACCTTCCATAAGCCTGGCTTCAAGCTACATGT 3002
Query 2862 GTTGGTGCTGCAGCA-CT-TATTTAGCCTGGTTGAGAGTGGAT-CATTGACAGAACCATT 2918
||||||||||||||| || | ||| ||||| |||||| || | | ||||||||||| ||
Sbjct 3003 GTTGGTGCTGCAGCAACTGT-TTT-GCCTGCCTGAGAGCGG-TGCTTTGACAGAACCCTT 3059
Query 2919 GTGGGATGATGCAACGGTAACCC-ATCCTTATCCAAATAATGTCGCCTTTGTACTTGAGT 2977
|||||||| | |||| || || | || ||||| | || || || ||||| | || |
Sbjct 3060 GTGGGATGCTACAACCGTT-CCTTACCCGTATCCGGACAACGTTGCATTTGTTCGCGAAT 3118
Query 2978 ACACCACCAAGCTTCTAAGCTCATCATTCCCTAACATGACTACAACAGAGGTGACACAAT 3037
|||||| ||||| || ||||| |||||||| ||||||||| || ||||||| |||||||
Sbjct 3119 ACACCATTAAGCTACTGAGCTCTTCATTCCCAAACATGACTGCAGCAGAGGTCACACAAT 3178
Query 3038 TTGTGAATCGACTTTACGAGTCGAGAAACGAT--GT-TGGCAGATTTAAGGATAACATAC 3094
|||||||| |||| |||||||| ||||| || || ||| | |||||| ||||||| |
Sbjct 3179 TTGTGAATGGACTATACGAGTCTAGAAATGACCCGTCTGG-A--TTTAAGAATAACATTC 3235
Query 3095 GCGACTTCCTTGTACAGTCCAAGGAATTTTCTGCTCAGGATAACAAAGATTTATATGCTG 3154
| ||||||||||||||||| ||||| ||||| |||||||||||||||||| | |||||||
Sbjct 3236 GTGACTTCCTTGTACAGTCTAAGGAGTTTTCCGCTCAGGATAACAAAGATCTCTATGCTG 3295
Query 3155 AGGAAGCTGCTGCACAAATGgagagagaga--gaCAAAGAATGCTTTCGATTCCTGGACT 3212
||||||| |||||||| | | ||||||||| | |||||||||||||| |||||||| ||
Sbjct 3296 AGGAAGCAGCTGCACAGA-G-AGAGAGAGAACGTCAAAGAATGCTTTCAATTCCTGGGCT 3353
Query 3213 TATAGCTCCCAGCGAAATTCAAGACGACATGG 3244
||| ||||| | || ||||||||||| ||||
Sbjct 3354 TATTGCTCCTAATGAGATTCAAGACGAGATGG 3385
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162992397807
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5