BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927847 Length=331 Score E Sequences producing significant alignments: (Bits) Value AT3G04160.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 294 3e-79 > AT3G04160.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage. | chr3:1091147-1094346 REVERSE LENGTH=2610 Length=2610 Score = 294 bits (159), Expect = 3e-79 Identities = 205/227 (90%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 6 CCGTCGCCGGAACTCATGGATCGACGACCGTCGTTTCCACACTATCAAATCCCTAATCCG 65 ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| Sbjct 36 CCGTCGCCGGAACTCATGGATCGACCACCGTCGTTGCCACACTATCAAAACCCTAATCCG 95 Query 66 AACTTGTTCCATCACGT-TCCTCCTCCAAACCCTAATCCTAATTTCTTCGTCCGACCTCC 124 ||| | ||| | ||| | |||||||||||| ||||||||||||||||| |||||||||| Sbjct 96 AACCTCTTCTACCAC-TATCCTCCTCCAAATTCTAATCCTAATTTCTTCTTCCGACCTCC 154 Query 125 TCTAGCTCATCTTCAAAATCCTAACAATTACTCCATCG--CCGTCTCCGCCGCCGATTTG 182 || | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 155 TCCACCTCCTCTTCAAAATCCTAACAATTACTCCATCGTTCCGTCTCCGCCGCCGATTCG 214 Query 183 CGAGCTCTCCGGTACAATCTCTTTTTTACAATCCCTGTTGTCGGAAT 229 |||||||||||||||| |||||| |||| ||||||||||||| |||| Sbjct 215 CGAGCTCTCCGGTACACTCTCTTCTTTAAAATCCCTGTTGTCAGAAT 261 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15432198943 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5