BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927854 Length=488 Score E Sequences producing significant alignments: (Bits) Value AT3G03400.1 | Symbols: | EF hand calcium-binding protein famil... 610 4e-174 > AT3G03400.1 | Symbols: | EF hand calcium-binding protein family | chr3:808745-809158 REVERSE LENGTH=414 Length=414 Score = 610 bits (330), Expect = 4e-174 Identities = 385/412 (93%), Gaps = 1/412 (0%) Strand=Plus/Plus Query 29 GAATAACATGTCGATAAGTGAAATCTTCGAGAGGTTTGACAAGAACAAAGACGGTAAGAT 88 |||||| ||||| ||||||| ||||||||||||||||||| || |||||| |||||||| Sbjct 3 GAATAATATGTCTTTAAGTGATATCTTCGAGAGGTTTGACACGAGCAAAGATGGTAAGAT 62 Query 89 CTCATGGGAAGAGTTTCGTGACGCGATTCATGCTCTCTCTCCAGCTATTCCTTCAGACAA 148 ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| || Sbjct 63 CTCTTGGGAAGAGTTTCGTGACGCGATTCATGCTCTCTCTCCATCTATCCCTTCAGAAAA 122 Query 149 ACTGGTCGAGATGTTCATCCAGCTTGACACGAACGGAGATGGTCAGCTCGATGCGGCCGA 208 ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | Sbjct 123 ACTCGTCGAGATGTTCATCCAGCTTGACACGAATGGAGATGGTCAGGTCGATGCGGCCAA 182 Query 209 ATTCGCTTCGTGTATGGACCAAACTGCTCAGTCTAGTGGTGGCGACGTGGAAAAAGAGTT 268 |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 183 ATTCGCTTCGTGCATGGACCAAACAGCTCAGTCTAGTGGTGGTGACGTGGAAAAAGAGTT 242 Query 269 GAAGGATGCGTTCAAACTATATGATATTGATTGTGATGGGAAGATATCGGCCAATGAGTT 328 ||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 243 GAAGGATGCTTTTAAACTATACGATATTAATTGTGATGGGAAGATATCGGCCAATGAGTT 302 Query 329 ACATGTGGTGATGACTCGGCTCGGAGAGAAGTGTACGGTTGAGAGCTGCGTAGGGATGGT 388 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 303 ACATGTGGTGATGACTCGGCTTGGAGAGAAGTGTACGGTCGAGAGCTGCGTAGGGATGGT 362 Query 389 TCAAGCTATCGATGTAGATGGTGATGGTTATATTAGCTTTG-AGGAGTTTAA 439 |||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 363 TCAAGCTATCGATGTAGATGGTGATGGTTATATTAGATTCGTAGGAGTTTAA 414 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23258410061 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5