BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg928106 Length=1025 Score E Sequences producing significant alignments: (Bits) Value AT3G05220.1 | Symbols: | Heavy metal transport/detoxification ... 1081 0.0 > AT3G05220.1 | Symbols: | Heavy metal transport/detoxification superfamily protein | chr3:1488595-1491320 FORWARD LENGTH=2096 Length=2096 Score = 1081 bits (585), Expect = 0.0 Identities = 723/785 (92%), Gaps = 28/785 (4%) Strand=Plus/Plus Query 262 GATGCCAAAAGTAGTGGGTGG-GGCCTTCTAGGGTTTTTCAAAAAGGGTAAAAGTGGAAA 320 |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| || Sbjct 1186 GATGCCAAAAGTGGT-GGTGGTGGCCTTCTAGGGTTTTTCAAAAAGGGTAAAAGTGGGAA 1244 Query 321 AGGAGATGAGAAGAAGGGCGCTGGGAAGAAAGATGGTCATGGGGGTAATAAGGTCAAATC 380 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1245 CGGAGATGAGAAGAAGAGCGCTGGGAAGAAAGATGGCCATGGGGGTAATAAGGTCAAATC 1304 Query 381 TCCTAGTGGGGGAGGAGGAGTTCAGCATTATGATAGTGGGCCTAAAAAAGGGGGAGGT-G 439 || | |||||||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct 1305 TCATGGTGGGGGAGGAGGAGTTCAGCATTATGATAGTGGGCCTAAAAAAGGTGGTGGTGG 1364 Query 440 GATCCAAAGGAGGAGCCCATGGAGGTCTTGACATTGATGAGCTCATGAAACACAGTAGTA 499 || |||||||||||| |||||| || ||||||||||||||||||||||||||| || | Sbjct 1365 GA-CCAAAGGAGGAGGCCATGGGGGCCTTGACATTGATGAGCTCATGAAACAC---AGCA 1420 Query 500 AaggaggaggaggaggaggTAACAAGGGCAATCATAATCATAGCGCAAAAGGTA-T--TG 556 |||||||||||||||||||||||||||||||||||||||||||||| ||||| | | || Sbjct 1421 AAGGAGGAGGAGGAGGAGGTAACAAGGGCAATCATAATCATAGCGCCAAAGGGATTGGTG 1480 Query 557 GTGGCCCAATGGGTCCAGGTGGTCCAATGGGTCAAGGCGGTCCGATGGGTCCAGGTGGTC 616 ||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||| Sbjct 1481 GTGGCCCAATGGGTCCAGGCGGTCCGATGGGTCCAGGCGGTCCGATGGGTCAAGGTGGTC 1540 Query 617 C---------GATGGGTCCAGGCGGTCCGATGGGTATGATGGGTCCAGGCGGTCCTATGG 667 | |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 1541 CGATGGGTATGATGGGTCCAGGTGGTCCGATGAGTATGATGGGTCCAGGCGGTCCTATGG 1600 Query 668 GTCCAATGGGTGGCCAAGGCGGCTCTTACCAAGCGGTTCAAGGCTTGCCGATGAGTGGAG 727 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 1601 GTCCAATGGGTGGCCAAGGCGGCTCTTACCCAGCGGTTCAAGGCTTGCCAATGAGTGGAG 1660 Query 728 GTGGAGGATATTATCCGGGGCCGCCTCAGGCAAGTCATcaaatgaaccaacaacaatata 787 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 1661 GTGGAGGATATTATCCAGGGCCGCCTCAGGCAAGTCAGCAAATGAACCAACAACAATATA 1720 Query 788 tgcaaatgatgatgaa-c--cagcag------caacaacaacaacaaGCTGCAGCTCATG 838 |||||||||||||||| | |||||| ||||||||||||||||||| |||||||| Sbjct 1721 TGCAAATGATGATGAACCAACAGCAGCAACAACAACAACAACAACAAGCTGTAGCTCATG 1780 Query 839 GAGGCTATGGTGGTGGTCACGGTGGAGACATGTACCATCCGATGATGTACGCTAGGCCTT 898 | |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 1781 GTGGCTATGGCGGTGGTCACGGTGGCGACATGTACCATCCGATGATGTACGCTCGGCCTT 1840 Query 899 ATCCTGCAGTTAATTATGCTCACCCGCCACCGATGCCGCCTCCTCACTCGGATTCTTATA 958 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 1841 ATCCTGCAGTTAATTATGCTCACCCTCCACCAATGCCGCCTCCTCACTCGGATTCTTATA 1900 Query 959 CTCATATGTTCAGCGATGAGAATCCAGGTAGTTGTAGTATCATGTGATCATCTTGTGTAA 1018 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 1901 CTCATATGTTCAGCGATGAGAATCCAGGTAGTTGTAGTATTATGTGATCATCTTTTGTAA 1960 Query 1019 TGTTA 1023 ||||| Sbjct 1961 TGTTA 1965 Score = 422 bits (228), Expect = 4e-117 Identities = 249/259 (96%), Gaps = 1/259 (0%) Strand=Plus/Plus Query 1 ACACACAAATCCAAGAG-AGTTATGAATAAACAAGATGTTATGAAACTTCAGACTTGTGT 59 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 192 ACACACAAATCTAAGAGAAGTTATGAATAAACAAGATGTTATGAAACTTCAGACTTGTGT 251 Query 60 TCTGAAAGTGAACGTACACTGTGAAGGGTGTAAGCATAAAGTGAAGAAACAATTGCAGAA 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 TCTGAAAGTGAACGTACACTGTGAAGGGTGTAAGCATAAAGTGAAGAAACAATTGCAGAA 311 Query 120 AATCGAAGGCGTTTACTCTGTCAAAGCAGATGTAGAACAGGGGAGAGTCACTGTTACAGG 179 ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 312 AATCGAAGGTGTTTACTCTGTAAAAGCAGATGTAGAACAGGGGAGAGTTACTGTTACAGG 371 Query 180 CAACGTTGACCCAGCTCTTCTGGTTAAGAAACTGAGCAAATCAGGCAAACATGCCGAGAT 239 ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 372 GAACATTGACCCAGCTCTTCTGGTTAAGAAACTTAGCAAATCAGGCAAACATGCCGAGAT 431 Query 240 CTTGGGCGGTGGCGGAGGA 258 ||| |||||||| |||||| Sbjct 432 CTTAGGCGGTGGTGGAGGA 450 Score = 73.1 bits (39), Expect = 5e-12 Identities = 41/42 (98%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 601 ATGGGTCCAGGTGGTCCGATGGGTCCAGGCGGTCCGATGGGT 642 ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1489 ATGGGTCCAGGCGGTCCGATGGGTCCAGGCGGTCCGATGGGT 1530 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50234147000 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5