BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928157
Length=994
Score E
Sequences producing significant alignments: (Bits) Value
AT3G05580.1 | Symbols: | Calcineurin-like metallo-phosphoester... 1631 0.0
AT5G27840.2 | Symbols: TOPP8 | Calcineurin-like metallo-phospho... 1070 0.0
> AT3G05580.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:1617847-1620120 REVERSE LENGTH=1596
Length=1596
Score = 1631 bits (883), Expect = 0.0
Identities = 958/995 (96%), Gaps = 2/995 (0%)
Strand=Plus/Plus
Query 1 TTGGGATCAGAGGAAGAGTGATGACGACTATGGAAGGGATGATGGAGATGGGTGTGTTGG 60
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 254 TTGGGATCAGAGGAAGAATGATGACGAGTATGGAAGGGATGATGGAGATGGGTGTATTGG 313
Query 61 ATGATATTATTAGGAGATTGTTGGAAGGTAAAGGAGGGAAACAGGTTCAGCTTTCGGAGA 120
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 314 ATGATATTATAAGGAGATTGTTGGAAGGTAAAGGAGGTAAACAGGTTCAGCTTTCGGAGG 373
Query 121 TCGAGATCCGTCAACTTTGCGTTAACGCCAGACAAATCTTCCTTTCTCAGCCTAATCTTC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 374 TCGAGATCCGTCAACTTTGCGTTAACGCCAGACAAATCTTCCTTTCTCAGCCTAATCTTC 433
Query 181 TCGAGCTTCATGCCCCCATTCGCATCTGTGGTGATATCCATGGACAGTACCAAGATCTTC 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 434 TCGAGCTTCATGCCCCCATTCGCATCTGCGGTGATATCCATGGACAGTACCAAGATCTTC 493
Query 241 TGAGGCTATTTGAATACGGAGGCTATCCTCCTTCAGCTAACTATCTCTTCCTCGGTGATT 300
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 494 TGAGGCTATTCGAATACGGAGGCTATCCTCCTTCAGCGAACTATCTCTTCCTCGGCGATT 553
Query 301 ACGTTGATAGAGGCAAGCAAAGTCTTGAAACAATATGTTTACTCTTGGCTTATAAAATCC 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 554 ACGTTGATAGAGGCAAGCAAAGTCTTGAAACAATATGTTTACTCTTGGCTTACAAAATCC 613
Query 361 GGTACCCATCCAAGATATTTCTCTTGAGAGGAAACCATGAAGACGCTAAGATCAACAGGA 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 614 GGTACCCATCCAAGATATTTCTCTTGAGAGGAAACCATGAAGATGCTAAGATCAACAGGA 673
Query 421 TTTACGGGTTCTATGACGAATGCAAGCGGAGATTCAATGTACGGCTTTGGAAGATATTCA 480
||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct 674 TTTACGGGTTCTATGACGAATGCAAACGGAGGTTTAATGTACGGCTTTGGAAGATATTCA 733
Query 481 CCGATTGCTTCAACTGTTTACCGGTAGCTGCTCTCATTGACGAGAAGATTCTATGTATGC 540
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 734 CCGATTGCTTCAACTGTTTGCCGGTAGCTGCTCTCATTGACGAGAAGATCCTATGTATGC 793
Query 541 ATGGTGGGTTGTCACCGGAATTGGAAAACTTGAGGCAGATTCGAAAGATCCAAAGGCCTA 600
||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||
Sbjct 794 ATGGTGGATTGTCACCGGAATTGGAAAACTTGGGGCAGATTCGGGAGATTCAAAGGCCTA 853
Query 601 CGGAGATTCCAGACAATGGTCTTCTTTGTGATCTACTTTGGTCTGATCCTGATCAAAAGA 660
| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 854 CAGAGATTCCAGACAATGGTCTTCTTTGTGATTTACTTTGGTCTGATCCTGATCAGAAGA 913
Query 661 ATGAAGGTTGGACTGATAGCGATCGAGGTATCTCCTGCACGTTTGGAGCCGATGTAGTCG 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 ATGAAGGGTGGACTGATAGCGATCGAGGTATCTCCTGCACGTTTGGAGCCGATGTAGTCG 973
Query 721 CTGACTTTTTGGATAAGAATGATCTCGATCTCATTTGCCGAGGCCATCAGGTAGTGGAAG 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 974 CTGACTTTTTGGATAAGAATGATCTCGATCTCATTTGCAGAGGCCATCAGGTAGTGGAAG 1033
Query 781 ATGGGTACGAGTTTTTCGCAAAACGGAGATTAGTCACGATATTTTCAGCTCCAAACTATG 840
||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct 1034 ATGGGTATGAGTTTTTCGCAAAACGGAGGTTAGTCACAATATTCTCAGCTCCAAACTATG 1093
Query 841 GTGGGGAGTTTGACAATGCCGGTGCATTATTGAGTGTGGATCAATCTCTCGTTTGCTCCT 900
| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1094 GAGGAGAGTTTGACAATGCCGGTGCATTATTGAGCGTGGATCAATCTCTCGTTTGCTCCT 1153
Query 901 TTGAGATTCTGAAACCGGCTCCAGCTTCTAGCAGC-AATCCTCTCAAGAAGGTACCGAAA 959
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 1154 TTGAGATTCTGAAACCGGCTCCAGCTTCTAGCA-CTAATCCTCTCAAGAAGGTACCGAAA 1212
Query 960 ATGGGGAAGTCTTGAAACTTAATAAAGCTTATTCC 994
|||||||||||||||||||||||| ||||||||||
Sbjct 1213 ATGGGGAAGTCTTGAAACTTAATACAGCTTATTCC 1247
> AT5G27840.2 | Symbols: TOPP8 | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr5:9862924-9865038 REVERSE
LENGTH=1648
Length=1648
Score = 1070 bits (579), Expect = 0.0
Identities = 819/937 (87%), Gaps = 8/937 (1%)
Strand=Plus/Plus
Query 19 TGATGACGACTATGGAAGGGATGATGGAGATGGGTGTGTTGGATGATATTATTAGGAGAT 78
||||||||| ||||||||||||| |||||| || || |||||||||||||| || ||||
Sbjct 212 TGATGACGAGTATGGAAGGGATGGTGGAGAAAGGAGTATTGGATGATATTATAAGAAGAT 271
Query 79 TGTTGGAAGGTAAAGGAGGGAAACAGGTTCAGCTTTCGGAGATCGAGATCCGTCAACTTT 138
|||| |||||||||||||| ||||||||||||||||| |||| |||||| |||||||| |
Sbjct 272 TGTTAGAAGGTAAAGGAGGCAAACAGGTTCAGCTTTCCGAGAGCGAGATTCGTCAACTCT 331
Query 139 GCGTTAACGC-CAGACAAATCTTCCTTTCTCAGCCTAATCTTCTCGAGCTTCATGCCCCC 197
|| ||||||| | | ||||||||||| ||||| |||||||| || || || ||||||||
Sbjct 332 GCTTTAACGCTC-GTCAAATCTTCCTCTCTCAACCTAATCTCCTTGATCTCCATGCCCCA 390
Query 198 ATTCGCATCTGTGGTGATATCCATGGACAGTACCAAGATCTTCTGAGGCTATTTGAATAC 257
||||||||||| |||||||| ||||| || || ||||||||| ||||| | |||||||||
Sbjct 391 ATTCGCATCTGCGGTGATATTCATGGTCAATATCAAGATCTTTTGAGGTTGTTTGAATAC 450
Query 258 GGAGGCTATCCTCCTTCAGCTAACTATCTCTTCCTCGGTGATTACGTTGATAGAGGCAAG 317
||||| |||||||||||||| |||||||| ||||| |||||||||||||| ||||||||
Sbjct 451 GGAGGTTATCCTCCTTCAGCAAACTATCTATTCCTTGGTGATTACGTTGACAGAGGCAAA 510
Query 318 CAAAGTCTTGAAACAATATGTTTAC-TCTTGGCTTATAAAATCCGGTACCCATCCAAGAT 376
||||||||||| || |||||||| | |||| ||||| || || ||||||||||| |||||
Sbjct 511 CAAAGTCTTGAGACCATATGTTTGCTTCTT-GCTTACAAGATACGGTACCCATCGAAGAT 569
Query 377 ATTTCTCTTGAGAGGAAACCATGAAGACGCTAAGATCAACAGGATTTACGGGTTCTATGA 436
|| ||| |||||||| |||||||| || |||||||||||||||||||||||||| |||||
Sbjct 570 ATATCTGTTGAGAGGGAACCATGAGGATGCTAAGATCAACAGGATTTACGGGTTTTATGA 629
Query 437 CGAATGCAAGCGGAGATTCAATGTACGGCTTTGGAAGATATTCACCGATTGCTTCAACTG 496
||| ||||| ||||||||||||||||| || |||||| | || || ||||||||||||||
Sbjct 630 CGAGTGCAAACGGAGATTCAATGTACGACTCTGGAAGGTGTTTACTGATTGCTTCAACTG 689
Query 497 TTTACCGGTAGCTGCTCTCATTGACGAGAAGATTCTATGTATGCATGGTGGGTTGTCACC 556
|||||| |||||||| || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct 690 TTTACCTGTAGCTGCACTTATTGATGAGAAGATACTGTGTATGCACGGTGGTTTGTCACC 749
Query 557 GGAATTGGAAAACTTGAGGCAGATTCGAAAGATCCAAAGGCCTACGGAGATTCCAGACAA 616
|| ||||| || |||| ||||||||| |||| |||||||||| |||||||||||||
Sbjct 750 AGATTTGGATAATTTGAATCAGATTCGAGAGATTCAAAGGCCTATTGAGATTCCAGACAG 809
Query 617 TGGTCTTCTTTGTGATCTACTTTGGTCTGATCCTGATCAAAAGAATGAAGGTTGGACTGA 676
|||||||||||||||| |||||||||| ||||||||||| |||| |||||||||| ||||
Sbjct 810 TGGTCTTCTTTGTGATTTACTTTGGTCAGATCCTGATCAGAAGATTGAAGGTTGGGCTGA 869
Query 677 TAGCGATCGAGGTATCTCCTGCACGTTTGGAGCCGATGTAGTCGCTGACTTTTTGGATAA 736
||| |||||||||||||| ||||| |||||||| ||| ||||||||| || ||||||||
Sbjct 870 TAGTGATCGAGGTATCTCTTGCACTTTTGGAGCTGATAAAGTCGCTGAGTTCTTGGATAA 929
Query 737 GAATGATCTCGATCTCATTTGCCGAGGCCATCAGGTAGTGGAAGATGGGTACGAGTTTTT 796
||||||||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 930 GAATGATCTTGACCTCATTTGCCGAGGCCATCAGGTAGTAGAAGACGGGTATGAGTTTTT 989
Query 797 CGCAAAACGGAGATTAGTCACGATATTTTCAGCTCCAAACTATGGTGGGGAGTTTGACAA 856
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 990 CGCAAAACGGAGATTAGTCACGATATTCTCAGCTCCAAACTATGGTGGGGAGTTTGACAA 1049
Query 857 TGCCGGTGCATTATTGAGTGTGGATCAA-TCTCTCGTTTGCTCCTTTGAGATTCTGAAAC 915
|| ||||| ||||| || || || | | ||||| || || |||||||||||| ||||||
Sbjct 1050 CGCTGGTGCGTTATTAAGCGTTGA-CGAGTCTCTTGTATGTTCCTTTGAGATTATGAAAC 1108
Query 916 CGGCTCCAGCTTCTAGCAG-CAATCCTCTCAAGAAGG 951
| || |||||||| ||||| || ||||||||||||||
Sbjct 1109 CAGCCCCAGCTTCAAGCAGTCA-TCCTCTCAAGAAGG 1144
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48676888443
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5