BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg928331

Length=311
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G14805.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer...   182    2e-45


> AT4G14805.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer 
protein/seed storage 2S albumin superfamily protein | chr4:8502374-8503199 
REVERSE LENGTH=660
Length=660

 Score =  182 bits (98),  Expect = 2e-45
 Identities = 113/120 (94%), Gaps = 2/120 (2%)
 Strand=Plus/Plus

Query  172  caccaccaccaccaccaGTTCCACAATACATCTCAAGCGACTCTC-CAAAGATCAGAAAC  230
            |||||||||||| |||||||| ||||||| ||||||||||||||| | ||||||||||||
Sbjct  542  CACCACCACCACTACCAGTTCTACAATACTTCTCAAGCGACTCTCTC-AAGATCAGAAAC  600

Query  231  TTCTGGTTTCCATTGACTATCATCATGACTTTTGCCACTTCTATTCTCACTCGTATCTGA  290
            ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  601  TTCTGGTTTCCATCGACTATCATCATGACTTTTGCCACTTCTATTCTCGCTCGTATCTGA  660



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14426843963


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5