BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg928595 Length=565 Score E Sequences producing significant alignments: (Bits) Value AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:2856... 785 0.0 > AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:2856141-2856659 FORWARD LENGTH=519 Length=519 Score = 785 bits (425), Expect = 0.0 Identities = 495/527 (94%), Gaps = 12/527 (2%) Strand=Plus/Plus Query 21 ATGGAAAACATCAAAAACCCTAAAAACGCAGATGATTGTTCCGATAGCATATCAAAAAAC 80 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAAAACATCAAAAACCCTAAAAACGCAGATGATTGTTCCGATAGCATATCAAAAAAC 60 Query 81 AGTCATCAGGGCGTTGATGATTCCCTGAACCAGTCAAGATCTTACGTATGCAGTTTCTGC 140 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGTCATCAAGGCGTTGATGATTCCCTGAACCAGTCAAGATCTTACGTATGCAGTTTCTGC 120 Query 141 ATAAGGGGCTTCTCGAATGCTCAAGCACTAGGAGGGCATATGAACATCCACAGAAGAGAC 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATAAGGGGCTTCTCGAATGCTCAAGCACTAGGAGGGCATATGAACATCCACAGAAGAGAC 180 Query 201 AGAGCTAAACTCAGACAAAAGCTTATGGAAGATAATAAGGATGATGTTGTTGCTGAGAGT 260 || |||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct 181 AGGGCTAAACTCAGACAAAAGCTTATGGAAGATAATAAGGATGATGTCGTCGCCGAGAGT 240 Query 261 GATTCATCAGAAGTTGTCTCTCTAGACCTTAATGaacaacaacaacaacaaG-A-A-GCT 317 ||| |||| |||||||| |||||||||||||||||||||||||||||||||| | | ||| Sbjct 241 GATGCATCCGAAGTTGTGTCTCTAGACCTTAATGAACAACAACAACAACAAGGAGAAGCT 300 Query 318 TTGACATGTGATGATCACGATGATCAAGATCAATATGTTGAGAAAGATTTAAGTCCTAAA 377 ||||||||||||||||||||| ||| | | | ||||| || ||| ||||||||||| Sbjct 301 TTGACATGTGATGATCACGAT---CAA--T-A-T--GTTGATAACGATATAAGTCCTAAA 351 Query 378 CAGAAATTAGAGTTTTGGGTTCAAGAAAGCAAGCTTGATACTAATGATCGTGGAAAGGGC 437 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 352 CAGAAATTAGAGTTTTGGGTTCAAGAAAGCAAGCTTGATACTAATGATCATGGAAAGGTC 411 Query 438 ACGGAGGTTAGCATAGATGGTTCGAGTTCGAGACATCATCGTGAGATTGAAGGATTGGAT 497 ||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||| Sbjct 412 ACGGAGGCTAGCATAGATGGTTCGAGTTCGAGTCATCATCGTGATATTGAAGTATTGGAT 471 Query 498 CTGGAGCTTCGGTTAGGCCAAAGCGTCGTGGAGAAGAAGACAACATA 544 || |||||||||||||||||||||||||| |||||||||||||||| Sbjct 472 CTCGAGCTTCGGTTAGGCCAAAGCGTCGTAAAGAAGAAGACAACATA 518 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27126439380 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5