BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928709
Length=1776
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10200.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 2145 0.0
AT5G04060.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 1232 0.0
> AT3G10200.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr3:3157608-3160188
FORWARD LENGTH=1958
Length=1958
Score = 2145 bits (1161), Expect = 0.0
Identities = 1284/1344 (96%), Gaps = 5/1344 (0%)
Strand=Plus/Plus
Query 436 TTAAAGGGTGGCCAAAATTGGGTGCATGAGCAAGGTCAGTTTTGGTGGTTCCCTGGTGGT 495
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 468 TTAAA-GGTGGCCAAAATTGGGTCCATGAGCAAGGTCAGTTTTGGTGGTTCCCTGGTGGT 526
Query 496 GGTACTCATTTTAAGCATGGAGCTGCAGAATATATCCAGAGGTTGGGGAATATGATGACT 555
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 527 GGTACTCATTTTAAGCATGGAGCTGCAGAATACATCCAGAGGTTGGGGAATATGATGACT 586
Query 556 AATGAAACAGGTGACTTTCGTTCAGCTGGGGTGGTACAAGTTCTTGATGTTGGCTGTGGC 615
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 587 AATGAAACAGGTGACTTGCGTTCAGCTGGGGTGGTACAAGTTCTTGATGTTGGCTGTGGA 646
Query 616 GTTGTGAGCTTTGCCGCTTATCTTCTTCCTTTAGGTATACAGACAATGTCATTTGCTCCC 675
|||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 647 GTTGCGAGCTTTGCGGCTTATCTTCTTCCCTTAGGTATACAGACAATTTCATTTGCTCCC 706
Query 676 AAAGATGGTCATGAAAACCAGATTCAGTTTGCATTGGAAAGAGGCATCGGTGCTATGATA 735
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 707 AAAGATGGTCATGAAAACCAGATTCAGTTTGCATTGGAGAGAGGCATTGGTGCAATGATA 766
Query 736 TCCGCGGTTGCCACCAAACAAATGCCTTATCCTGCAGCCTCGTTTGAGATGGTTCATTGT 795
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 767 TCCGCGGTTGCCACCAAACAATTGCCATATCCTGCAGCCTCGTTTGAGATGGTTCATTGT 826
Query 796 TCGAGATGTCGTGTTGATTGGCATGCAAATGATGGCATCTTACTAAAAGAAGTTCATCGT 855
||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||
Sbjct 827 TCGAGATGTCGTGTTGACTGGCATACAAATGATGGCATCTTACTTAAAGAAGTTCATCGT 886
Query 856 CTTCTCCGACCAAATGGATTCTTTGTGTATTCATCGCCACCAGCTTATAGAAATGATAAA 915
||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct 887 CTTCTCCGACCAAATGGATTCTTCGTGTATTCATCACCACCAGCATATAGAAAGGATAAA 946
Query 916 GAGTATCCTATGATCTGGGATAAGTTGGTCAATCTAACTAGTGCAATGTGCTGGAAGCTC 975
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 GAGTATCCTATGATTTGGGATAAGTTGGTCAATCTAACTAGTGCAATGTGCTGGAAGCTT 1006
Query 976 ATTTCCCGGAAGGTACAGACTGCAATATGGATTAAAGACGAGAATGAGGTGTGTCTTAGG 1035
|||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |
Sbjct 1007 ATTTCCCGGAAGGTACAGACTGCAATATGGATTAAAGAAGAGAAGGAGGTTTGTCTTAAG 1066
Query 1036 CAGAATGCAGAGCTAAAGCTCATAAGTTTATGTGATGTGGAAGATGTTTTGAAACCATCA 1095
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1067 CAGAAAGCAGAGCTAAAGCTAATAAGTTTATGTGATGTGGAAGATGTTTTGAAACCATCA 1126
Query 1096 TGGAAAGTTACTCTGAGAGATTGTGTGCAAATCAGTGGACAAACAGAAGAGAGACCCTCT 1155
||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127 TGGAAAGTTCCTCTTAAAGATTGTGTGCAAATCAGTGGACAAACAGAAGAGAGACCCTCT 1186
Query 1156 TCTTTAGCTGAACGTCTTTCTGCGTATCCGGGGACTCTAAGAAAAATAGGGATCAGTGAA 1215
||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct 1187 TCTTTAGCTGAACGTCTTTCTGCATATCCAGCAACTCTAAGAAAAATAGGGATCAGTGAA 1246
Query 1216 GATGAATATACATCAGATACAGTCTACTGGAGAGAACAAGTTAATCACTATTGGCGGTTA 1275
||||||||||||||||||||||| | ||||||||||||||||||||| || |||||||||
Sbjct 1247 GATGAATATACATCAGATACAGTGTTCTGGAGAGAACAAGTTAATCATTACTGGCGGTTA 1306
Query 1276 ATGAATGTCAATGAGACTGAAGTCA-GGAATGCGATGGACATGAACGCATTCATTGGTGG 1334
||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct 1307 ATGAATGTCAATGAGACTGAAGT-ACGGAATGTGATGGACATGAACGCATTCATTGGTGG 1365
Query 1335 GTTTGCTGCAGCTATGAATTCGTATCCTGTTTGGGTAATGAACATAGTACCTGCTACCAT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1366 TTTTGCTGCAGCTATGAATTCGTATCCTGTTTGGGTAATGAACATAGTACCTGCAACCAT 1425
Query 1395 GAATGATACCTTGTCTGGAATTTTCGAGAGAGGCTTAAATGGAGCTTTCCATGATTGGTG 1454
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1426 GAATGATACCTTGTCTGGAATTTTCGAGAGAGGCTTAAATGGCGCTTTCCATGATTGGTG 1485
Query 1455 TGAGGCGTTCTCAACATATCCTCGCACGTATGATTTGCTGCATTCCGATCATGTCTTCTC 1514
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1486 TGAGGCGTTCTCAACATATCCACGCACGTATGATTTGGTGCATTCCGATCATGTCTTCTC 1545
Query 1515 TCATTACAACAAAAGCTACGGAGATGGTTGTTTGCTAGAGGATATCATGCTTGAGATGGA 1574
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546 TCACTACAACAAAAGCTACGGAGATGGTTGTTTGCTAGAGGATATCATGCTTGAGATGGA 1605
Query 1575 CCGCATAGTTCGCCCTCAGGGGTTTATCATAATAAGGGACGAGGAATCTATCATCTCAAG 1634
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1606 CCGCATAGTTCGCCCTCAGGGGTTTGTCATAATAAGGGACGAGGAATATATCATCTCAAG 1665
Query 1635 GATCCGAGACTTGGCTCCTAAATTATTGTGGGAAGTGGAAACTCATGAGCTTGAAAACAA 1694
|||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1666 GATCCGAGGCTTGGCTCCAAAATTCTTGTGGGAAGTGGAAACTCATGAGCTTGAAAACAA 1725
Query 1695 AGACAAGAAGATGACAGAGACTGTTTTGTTTTGCAGAAAGAGATTCTGGGCTATCATTTG 1754
|||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1726 AGACAAGAAGATAACAGAGTCTGTTTTGTTTTGCAGAAAGAGATTCTGGGCAATCATTTG 1785
Query 1755 AA-TAGACTCGCTATTTTT-GCTC 1776
|| ||||||| |||||||| ||||
Sbjct 1786 AAATAGACTCACTATTTTTAGCTC 1809
Score = 595 bits (322), Expect = 4e-169
Identities = 394/427 (92%), Gaps = 12/427 (3%)
Strand=Plus/Plus
Query 21 GACAGAAACAATGGGAGGTTCTGTGTTTGGTGCAGCGAGATCAGGGCAGACGATAATGGT 80
||||||||||||| |||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct 1 GACAGAAACAATGAGAGGTTCTGTAATTGGTGCAGAGAGATCCGGGCAGACGATAATGGT 60
Query 81 TGCTCTCGTTCTTATGGTTGGATCATTTTACACTGGCTCTCTCTTCGGAACCAACCAACC 140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GGCTCTCGTTCTTATGGTTGGATCATTTTACACTGGCTCTCTCTTCGGAACCAACCAACC 120
Query 141 CATTTACGTCTCTCAACCTTCTTCTCACCCTGCTTCTTCCAAATTTGCAAACAAAGTCGC 200
||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | |
Sbjct 121 CATTTACGTCTCTCATCCTTCTTCTCACTCTGCTTCTTCCAAATTTGCAAACAAAATTGA 180
Query 201 GCTTACTTATAGGAGATTACCACTAGTCATACCTGAAACTGGGATGAATGTGTGTCCATT 260
|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 181 GCTTACTTATAGAAGATTACCACTAGTCATACCTGAATCTGGGATGAATGTGTGTCCACT 240
Query 261 GGAGTTCAATGAGTATATCCCTTGTCACAATGTCACTTATGTGCATCAGCTGCTTCCAAG 320
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 241 GGAGTTCAATGAGTATATACCTTGTCACAATGTCACCTATGTGCATCAGCTGCTACCAAG 300
Query 321 CTTGAATCTTTCTAGAAGAGAAGAGCTCGAAAGGCATTGCCCGCCACTCGAGCAC----T 376
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 301 CTTGAATCTTTCTAGAAGAGAAGACCTCGAAAGGCATTGCCCGCCACTCGAGCACCGCCT 360
Query 377 T----G---G-TACCTCCACCAAATGATTATAAGATACCTATAAAATGGCCAACCAGTAG 428
| | | ||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct 361 TTTTTGCTTGGTACCTCCGCCAAATGATTATAAGATACCTATTAGATGGCCAACCAGTAG 420
Query 429 AGACTAT 435
|||||||
Sbjct 421 AGACTAT 427
> AT5G04060.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr5:1099118-1102058
FORWARD LENGTH=2204
Length=2204
Score = 1232 bits (667), Expect = 0.0
Identities = 1118/1334 (84%), Gaps = 37/1334 (3%)
Strand=Plus/Plus
Query 438 AAAGGGTGGCCAAAATTGGGTGCATGAGCAAGGTCAGTTTTGGTGGTTCCCTGGTGGTGG 497
||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 646 AAA-GGCGGCCAAAATTGGGTGCATGAACAAGGTCAGTTATGGTGGTTCCCTGGTGGTGG 704
Query 498 TACTCATTTTAAGCATGGAGCTGCAGAATATATCCAGAGGTTGGGGAATATGATGACTAA 557
||||||||| || ||||||||| | ||||| ||||||||||| || || |||| |||||
Sbjct 705 TACTCATTTCAAACATGGAGCTCCGGAATACATCCAGAGGTTAGGAAACATGACAACTAA 764
Query 558 TGAAACAGGTGACTTTCGTTCAGCTGGGGTGGTACAAGTTCTTGATGTTGGCTGTGGCGT 617
||||||||||||| ||| |||||||||||| | |||||||||||||||||| ||||| ||
Sbjct 765 TGAAACAGGTGACCTTCTTTCAGCTGGGGTTGAACAAGTTCTTGATGTTGGATGTGGAGT 824
Query 618 TG-TGAGCTTTGCCGCTTATCTTCTTCCTTTAGGTATACAGACAATGTCATTTGCTCCC- 675
|| | |||||||| |||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct 825 TGCT-AGCTTTGCAGCTTATCTTCTTCCTTTAGGTATAAAGACAATGTCTTTTGC-CCCT 882
Query 676 AAAGATGGTCATGAAAACCAGATTCAGTTTGCATTGGAAAGAGGCATCGGTGCTATGATA 735
|||||||||||||||||||| || |||||||||||||| ||||| ||| | || |||||
Sbjct 883 AAAGATGGTCATGAAAACCAAATCCAGTTTGCATTGGAGAGAGGAATCCGCGCAATGATC 942
Query 736 TCCGCGGTTGCCACCAAACAAATGCCTTATCCTGCAGCCTCGTTTGAGATGGTTCATTGT 795
|| || | ||||||||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct 943 TCTGCCATAGCCACCAAACAAATGCCATATCCCGCGGCCTCGTTTGATATGGTTCACTGT 1002
Query 796 TCGAGATGTCGTGTTGATTGGCATGCAAATGATGGCATCTT-ACTAAAAGAAGTTCATCG 854
|| |||||||||||||||||||||| ||||||||| |||| | | ||||| ||| ||||
Sbjct 1003 TCAAGATGTCGTGTTGATTGGCATGAAAATGATGGTGTCTTGA-TGAAAGAGGTTAATCG 1061
Query 855 TCTTCTCCGACCAAATGGATTCTTTGTGTATTCATCGCCACCAGCTTATAGAAATGATAA 914
|||||||||||| ||||||| |||||| || || | ||||| || || ||||| |||||
Sbjct 1062 TCTTCTCCGACCCAATGGATACTTTGTTTACTCGGCACCACCTGCGTACAGAAAGGATAA 1121
Query 915 AGAGTATCC-TATGATCTGGGATAAGTTGGTCAATCTAACTAGTGCAATGTGCTGGAAGC 973
||| | ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1122 AGATT-TCCCTGTGATTTGGGATAAGTTGGTCAATCTAACTAGCGCAATGTGCTGGAAGC 1180
Query 974 TCATTTCCCGGAAGGTACAGACTGCAATATGGATTAAAGACGA-GAATGAGG-TGTGTCT 1031
|||||||||| ||||||||||||||||||||| ||||||| || || |||| | || ||
Sbjct 1181 TCATTTCCCGAAAGGTACAGACTGCAATATGGGTTAAAGAAGATGAC-GAGGCT-TGCCT 1238
Query 1032 TAGGCAGAATGCAGAGCTAAAGCTCATAAGTTTATGTGATGTGGAAGATGTTTTGAAACC 1091
|||| |||||||||||||| |||| |||| | |||||| ||| |||||||||| |||| |
Sbjct 1239 TAGGAAGAATGCAGAGCTAGAGCTTATAACTATATGTGGTGTAGAAGATGTTTCGAAAGC 1298
Query 1092 ATCATGGAAAGTTACTCTGAGAGATTGTGTGCAAATCAGTGGACAAACAGA-AG-AGAGA 1149
|||||||||||| |||| ||||| |||||| | || |||| | ||| ||| | ||| |
Sbjct 1299 TTCATGGAAAGTTCCTCTTAGAGACTGTGTGGACATTAGTG-A-AAATAGACAACAGAAA 1356
Query 1150 CCCTCTTCTTTAGCTGAACGTCTTTCTGCGTATCCGGGGACTCTAAGA-AAAATAGGGAT 1208
|||||||||||| |||| ||||| ||| | ||||| | ||||||| |||| ||| ||
Sbjct 1357 CCCTCTTCTTTAACTGACCGTCTATCTTCATATCCAACAAGTCTAAGAGAAAA-AGGCAT 1415
Query 1209 CAGTGAAGATGAATATACATCAGATACAGTCTACTGGAGAGAACAAGTTAATCACTATTG 1268
||| ||||| |||| ||||| || ||| || ||||||||||||||| ||||| || ||
Sbjct 1416 CAGCGAAGACGAATTTACATTGGACACAAACTTCTGGAGAGAACAAGTGAATCAGTACTG 1475
Query 1269 GCG-GTTAATGAATGTCAATGAGACTGAAGT-CAGGAATGCGATGGACATGAACGCATTC 1326
| | ||| |||||||| ||| |||||||||| | | |||| |||||||| || ||||||
Sbjct 1476 G-GAGTTGATGAATGTTAATAAGACTGAAGTGC-GAAATGTGATGGACACAAATGCATTC 1533
Query 1327 ATTGGTGGGTTTGCTGCAGCTATGAATTCGTATCCTGTTTGGGTAATGAACATAGTACCT 1386
|||||||| ||||| ||||| ||||| || ||||| ||||||| |||||| | ||||||
Sbjct 1534 ATTGGTGGATTTGCCGCAGCCATGAACTCATATCCCCTTTGGGTCATGAACGTTGTACCT 1593
Query 1387 GCTACCATGAATGATACCTTGTCTGGAATTTTCGAGAGAGGCTTAAATGGAGCTT-TCCA 1445
||||| ||||| |||||||| || ||||||| | |||| ||||||| || |||| || |
Sbjct 1594 GCTACAATGAACGATACCTTATCCGGAATTTACCAGAGGGGCTTAACCGGTGCTTATC-A 1652
Query 1446 TGATTGGTGTGAGGCGTTCTCAACATATCCTCGCACGTATGATTTGCTGCATTCCGATCA 1505
||||||||||||| | |||||||||||||| || || || ||| |||| || | || ||
Sbjct 1653 TGATTGGTGTGAGCCATTCTCAACATATCCCCGTACTTACGATCTGCTACACGCGGACCA 1712
Query 1506 TGTCTTCTCTCATTACAACAAAAGCTACGGAGATGGTTGTTTGCTAGAGGATATCATGCT 1565
| ||||| |||| || || || |||||| || |||||||| |||||||| ||||||||
Sbjct 1713 TCTCTTCACTCACTATAA-AAT--CTACGGTGAAGGTTGTTTACTAGAGGACATCATGCT 1769
Query 1566 TGAGATGGACCGCAT-AGTTCGCCCTCAGGGGTTTATCATAATAAGGGACGAGGAATCTA 1624
||||||||||||||| | | ||||||||||| |||||||| || || ||||||||||| |
Sbjct 1770 TGAGATGGACCGCATTA-TACGCCCTCAGGGATTTATCATTATCAGAGACGAGGAATCAA 1828
Query 1625 TCATCTCAAG-GATCCGAGACTTGGCTCCTAAATTA-TTGTGGGAAGTGGAAACTCATGA 1682
|| ||||||| | ||||||||||||||||||| || || |||||||| ||| | |||||
Sbjct 1829 TCGTCTCAAGAG-TCCGAGACTTGGCTCCTAAGTTCCTT-TGGGAAGTTGAAGCACATGA 1886
Query 1683 GCTTGAAAACAAAGACAAGAAGATGACAGAGACTGTTTTGTTTTGCAGAAAGAGATTCTG 1742
|||| || ||||| ||||||||| |||| |||||| | ||||||||||||| ||| ||
Sbjct 1887 GCTTCAAGACAAATACAAGAAGA---CAGAAACTGTTCTATTTTGCAGAAAGAAATTTTG 1943
Query 1743 GGCTATCATTTGAA 1756
||| ||| ||||||
Sbjct 1944 GGCAATCCTTTGAA 1957
Score = 193 bits (104), Expect = 6e-48
Identities = 279/358 (78%), Gaps = 33/358 (9%)
Strand=Plus/Plus
Query 44 TGTTTGGTGCAGCGAGATCAGGGCAGACGATAATGGTTGCTCTCGTTCTTATGGTTGGAT 103
|||||||| | || ||||| ||||||| ||||||||| ||||| || || ||||||||||
Sbjct 173 TGTTTGGTTCGGCTAGATCGGGGCAGATGATAATGGTGGCTCTGGTCCTAATGGTTGGAT 232
Query 104 CATTTTACACTGGCTCTCTCTTCGG-AACCA---ACC-A-ACCCATTT----A-CGTC-T 151
|||||||| | |||||| ||||||| ||| | ||| | ||||| | | || |
Sbjct 233 CATTTTACGCAGGCTCTATCTTCGGAAACAATTCACCTATTTACATTTCCCAACCTTCTT 292
Query 152 C-T-CAA--C--CTTCTTC-TCACCCT-GC-TTCT--T-C--CAAA-TTTGCAAACAAAG 196
| | ||| | ||||||| || || | | ||| | | |||| ||||| ||||||
Sbjct 293 CTTCCAATTCTTCTTCTTCTTCTCCATCACAATCTGGTCCATCAAATTTTGCTAACAAAA 352
Query 197 TCGCGCTTACTTATAGGAGATTACCACTAG--TC-ATACCTGAAACTGGGATGAATGTGT 253
| | ||| ||||| ||||| || || | || || ||||| | |||| ||||||| |
Sbjct 353 TAGAGCTCACTTACCGGAGA--ACTTCT-GTTTCGATCCCTGAGAGTGGGGTGAATGTTT 409
Query 254 GTCCATTGGAGTTCAATGAGTATATCCCTTGTCACAATGTCACTTATGTGCATCAGCTGC 313
|||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct 410 GTCCATTGAAGTTCAATGAGTATATACCTTGTCACAATGTCACGTATGTGCAACAGCTTC 469
Query 314 TTCCAAGCTTGAATCTTTCTAGAAGAGAAGAGCTCGAAAGGCATTGCCCGCCACTCGA 371
| |||||||||||||||||||||||||||||||| || || || || |||||||||||
Sbjct 470 TCCCAAGCTTGAATCTTTCTAGAAGAGAAGAGCTTGAGAGACACTGTCCGCCACTCGA 527
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87850953750
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5