BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg928759 Length=272 Score E Sequences producing significant alignments: (Bits) Value AT3G10575.1 | Symbols: | pseudogene, similar to putative 3-pho... 187 4e-47 AT3G10540.1 | Symbols: | 3-phosphoinositide-dependent protein ... 169 1e-41 AT5G04510.1 | Symbols: PDK1, ATPDK1 | 3'-phosphoinositide-depen... 121 4e-27 > AT3G10575.1 | Symbols: | pseudogene, similar to putative 3-phosphoinositide-dependent protein kinase-1, similar to 3-phosphoinositide-dependent protein kinase-1 GB:AAD37165 (Arabidopsis thaliana); blastp match of 79% identity and 7.5e-31 P-value to GP|19571127|dbj|BAB86551.1||AP003566 putative 3-phosphoinositide-dependent protein kinase-1 {Oryza sativa (japonica cultivar-group)} | chr3:3306508-3307035 FORWARD LENGTH=528 Length=528 Score = 187 bits (101), Expect = 4e-47 Identities = 143/161 (89%), Gaps = 12/161 (7%) Strand=Plus/Plus Query 114 GCCTTTAAGATCATGGACAAAAAGTTTATCACCAAGGAGAATAAAACAGCTTATGTCAAA 173 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 354 GCCTTAAAGATCATGGACAAAAAGTTTATCACCAAAGAGAATAAAACCGCTTATGTCAAA 413 Query 174 TTGGAGAGGATTGTTCTTGATC--C-CG--------G-GATTGTGAAACTCTTCTTTACT 221 |||||||||||||||||||||| | || | |||||||||||| ||||||||| Sbjct 414 TTGGAGAGGATTGTTCTTGATCAACTCGAACATCCCGAGATTGTGAAACTGTTCTTTACT 473 Query 222 TTTCAAGATACACAATCACTATGTAGGTAGTTTCTATTCAA 262 |||||||| || ||||||||||||||||||||||||||||| Sbjct 474 TTTCAAGACACGCAATCACTATGTAGGTAGTTTCTATTCAA 514 > AT3G10540.1 | Symbols: | 3-phosphoinositide-dependent protein kinase | chr3:3289695-3292702 FORWARD LENGTH=1955 Length=1955 Score = 169 bits (91), Expect = 1e-41 Identities = 101/106 (95%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 17 GGAGATGTTGACTACGGAGAAGGAATTTGATTCAAAGCTTGCTCTTCAAGGGAATTCATC 76 |||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 218 GGAGATGTTGACAATGGACAAGGAATTTGATTCAAAGCTTACTCTTCAAGGGAATTCATC 277 Query 77 TTCAAATGGTGAAACTATTTCCAGAAGCAAAAGCCTCGCCTTTAAG 122 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 278 TTCAAATGGTGAAACTATTTCCAGAAGCAAAAGCTTCGCCTTTAAG 323 Score = 169 bits (91), Expect = 1e-41 Identities = 127/142 (89%), Gaps = 12/142 (8%) Strand=Plus/Plus Query 114 GCCTTTAAGATCATGGACAAAAAGTTTATCACCAAGGAGAATAAAACAGCTTATGTCAAA 173 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 GCCTTGAAGATCATGGACAAAAAGTTTATCACCAAGGAGAATAAAACAGCTTATGTCAAA 494 Query 174 TTGGAGAGGATTGTTCTTGATC--C-CG--------GG-ATTGTGAAACTCTTCTTTACT 221 |||||||||||||||||||||| | || || |||||||||||||||||||| Sbjct 495 TTGGAGAGGATTGTTCTTGATCAACTCGAACATCCCGGGATTGTGAAACTCTTCTTTACG 554 Query 222 TTTCAAGATACACAATCACTAT 243 ||||| |||||||||||||||| Sbjct 555 TTTCAGGATACACAATCACTAT 576 > AT5G04510.1 | Symbols: PDK1, ATPDK1 | 3'-phosphoinositide-dependent protein kinase 1 | chr5:1286866-1289908 FORWARD LENGTH=2072 Length=2072 Score = 121 bits (65), Expect = 4e-27 Identities = 76/81 (94%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 116 CTTT-AAGATCATGGACAAAAAGTTTATCACCAAGGAGAATAAAACAGCTTATGTCAAAT 174 |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 581 CTTTAAAGATTATGGACAAAAAGTTTATCACCAAGGAGAATAAAACTGCTTATGTGAAAT 640 Query 175 TGGAGAGGATTGTTCTTGATC 195 |||| |||||||||||||||| Sbjct 641 TGGAAAGGATTGTTCTTGATC 661 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12466401752 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5