BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg928800

Length=298
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D d...   226    1e-58


> AT4G35790.1 | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D 
delta | chr4:16955518-16960170 REVERSE LENGTH=3158
Length=3158

 Score =  226 bits (122),  Expect = 1e-58
 Identities = 219/262 (84%), Gaps = 22/262 (8%)
 Strand=Plus/Plus

Query  55    GTTGTTGGCATTCTCTCTTCATGCACCATCAAAAGTGTGTTCTTGTAGACACTCATGATG  114
             |||||||| |  ||||||||| ||||||||||||||||||||||||||||||||| | ||
Sbjct  1388  GTTGTTGG-A-ACTCTCTTCACGCACCATCAAAAGTGTGTTCTTGTAGACACTCAGGCTG  1445

Query  115   TTGGTAATAA-CTGTAAGGTCACAGCTTTTATTGGAGGTATAGATCTTTGTGATGGCCGC  173
             |||||||||| | | |||||||| ||||||||||||||| ||||||||||||||||||| 
Sbjct  1446  TTGGTAATAATC-GCAAGGTCACCGCTTTTATTGGAGGTCTAGATCTTTGTGATGGCCGT  1504

Query  174   TATGACACACCTGATCTT-G-A-A----AC--T---G----TGT-TT-AAGGATGATTTT  215
             |||||||||||||| | | | | |    ||  |   |    ||| || ||||||||||| 
Sbjct  1505  TATGACACACCTGAGCATAGGATACTCCACGATCTTGACACTGTATTTAAGGATGATTTC  1564

Query  216   CACAATCCTACATTTCCTGCTGGTACTAAGGATCCAAAACAGCCTTGGCATGATTTGCAC  275
             ||||||||||||||||| |||||||| ||||  |||| ||| |||||||| |||||||||
Sbjct  1565  CACAATCCTACATTTCCAGCTGGTACCAAGGCCCCAAGACAACCTTGGCACGATTTGCAC  1624

Query  276   TGAATGATAGATGGGCATGCGG  297
             || | ||||||||||| |||||
Sbjct  1625  TGTAGGATAGATGGGCCTGCGG  1646



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13773363226


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5