BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928862
Length=952
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11470.2 | Symbols: | 4'-phosphopantetheinyl transferase su... 1288 0.0
AT2G02770.1 | Symbols: | 4'-phosphopantetheinyl transferase su... 571 4e-162
> AT3G11470.2 | Symbols: | 4'-phosphopantetheinyl transferase
superfamily | chr3:3610147-3612370 REVERSE LENGTH=1155
Length=1155
Score = 1288 bits (697), Expect = 0.0
Identities = 862/941 (92%), Gaps = 13/941 (1%)
Strand=Plus/Plus
Query 11 aaGACTTTGTTTGGAGCTGATGAGAATCAGTGTCATTTCGCAATTGCAGCGAAGCTTCTC 70
|||| |||| |||||||||||||||||||| ||||| || ||||||||||||||||| ||
Sbjct 121 AAGAATTTG-TTGGAGCTGATGAGAATCAGAGTCATGTCTCAATTGCAGCGAAGCTTATC 179
Query 71 AATGGAATTTCCATCACTCGTTTCTCT-CAAACTTCCATCTCCAATGGAGACTCATCTAT 129
|| ||||| || ||||| ||| |||| | |||||||||||| ||||||||||||||||
Sbjct 180 GATCGAATTGCCTTCACTGGTTCCTCTGC-AACTTCCATCTCGGATGGAGACTCATCTAT 238
Query 130 GGTATATTCGACCAGATGAAGTGAAAATTCCATCTCTTTTAAAACACTACTCTCAACTTC 189
||| ||||||||||||||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 239 GGTTTATTCGACCAGATGAAGTGAAGAGTACATCTCTTCTAAAACACTACTCTCAACTTC 298
Query 190 TGTCACCATCTGAGATAGATAAAGTTTC-TCAGCTTCGAGGCGATGCGCTTAAGAAGAAT 248
|||||||| | |||| ||| |||| ||| |||| | |||||||||| |||||||||||||
Sbjct 299 TGTCACCAACCGAGAAAGAGAAAG-TTCTTCAGATGCGAGGCGATGAGCTTAAGAAGAAT 357
Query 249 GCTTTGCTTGCTCGAACCTTGGTTCGCACCACCATTGCAAGATATCA-GACAAACAATGC 307
|||||||||||||||||||||||||| ||||||||||| |||| | | |||||||||||
Sbjct 358 GCTTTGCTTGCTCGAACCTTGGTTCGGACCACCATTGCTAGATGT-ATGACAAACAATGA 416
Query 308 AGTCGATCCTC-GGTCCTTGATGTTTAAGAAGAATACATATGGGAAGCCTGAGGTAGATT 366
|||||||||| || |||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 417 AGTCGATCCTAAGG-CCTTGATGTTCAAGAAGAATATGTATGGGAAGCCTGAGGTAGATT 475
Query 367 GGCAGAATTATAAGAACTGTAATAACCCACCATTGCATTTCAATATCTCCCACACAGATT 426
|||||||||||| |||||||||||| ||||||||||||||||| || || ||||||||||
Sbjct 476 GGCAGAATTATACGAACTGTAATAATCCACCATTGCATTTCAACATTTCTCACACAGATT 535
Query 427 CATTAATTGCCTGTGGGGTGACTGTACATGTTCCGGTTGGTATCGATGTTGAAGACAAGG 486
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 536 CATTAATTGCCTGTGGGGTGACTGTACACGTTCCGGTTGGTATCGATGTTGAAGACAAGG 595
Query 487 AAAGGAAGATTAAACATGACGTCTTAGCATTTGCAGAAAGATTCTACTCTGCTGATGAAG 546
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 596 AAAGGAAGATTAAACATGATATCTTAGCATTTGCAGAAAGATTTTACTCTGCTGATGAAG 655
Query 547 TGAAGTTTTTGTCAACTATACCGGACCCGGAAAGT-CAGCGAAAGGAGTTTATTAAGTTA 605
| ||||||||||||||| |||||||||| ||| || ||| ||||||| ||||||||||||
Sbjct 656 TCAAGTTTTTGTCAACTTTACCGGACCCTGAA-GTTCAGAGAAAGGAATTTATTAAGTTA 714
Query 606 TGGACTCTAAAGGAGGCATATGTGAAAGCATTAGGAAAAGGGTTTTCTGCTGCACCTTTT 665
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 715 TGGACCCTAAAGGAGGCATATGTGAAAGCATTAGGAAAAGGCTTTTCTGCTGCACCTTTT 774
Query 666 AATACCTTCACAATCCAATCTAAGGCTGGAACAAAAGGAGAATACAATCTTTGCAAGAC- 724
||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||
Sbjct 775 AATACCTTCACAATCCAGTCCAAGGTTGGAACAAAAGGAGAATACAATCTTTGCAAGATG 834
Query 725 ATCTGAAATGACTACCAGTTCACTGGAGAAGACAAACAATTGCAACGGAGGATGGAAGTT 784
| ||||||||||| | ||||| |||||| |||||||||| ||| | |||| |||||||||
Sbjct 835 A-CTGAAATGACTGCAAGTTCGCTGGAGGAGACAAACAAATGCGATGGAGAATGGAAGTT 893
Query 785 TTCCCTTTTGGAGTTGGCTGATTCTCATTATGCTGCAATCTGTATTGAAGATGATCAAGC 844
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 894 TTCCCTTTTGGAGTTGGATGATTCTCATTATGCTGCAATCTGTATTGAAGATGATGAAGC 953
Query 845 TAGTGGAGGAGCTCCTATGAGGGTGATTGTTCGAAAAACCATCCCGTTTGTAGAAGATGA 904
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 954 TAGTGGAGGAGCTCCTATGAGGGTGATTGTCCGAAAAACCATCCCGTTTGTAGAAGATGA 1013
Query 905 ACTTATTTCTGAAAGCAAACTTCTTTAGGTAGTGTAGCCTT 945
|||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1014 ACTTATATCTGAAAGCAAACTTCTTTAGTTAGTGTAGCCTT 1054
> AT2G02770.1 | Symbols: | 4'-phosphopantetheinyl transferase
superfamily | chr2:775482-779786 REVERSE LENGTH=2161
Length=2161
Score = 571 bits (309), Expect = 4e-162
Identities = 389/428 (91%), Gaps = 4/428 (1%)
Strand=Plus/Plus
Query 292 ATCAGACAAACAATGCAGTCGATCCTCGGTCCTTGATGTTTAAGAAGAATACATATGGGA 351
||||||||||||||| ||||||||| || ||||||| || |||||||| | |||||||
Sbjct 1178 ATCAGACAAACAATGTGGTCGATCCTAGGACCTTGATATTCAAGAAGAACATGTATGGGA 1237
Query 352 AGCCTGAGGTAGATTGGCAGAATTATAAGAACTGTAATAACCCACCATTGCATTTCAATA 411
||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| || |
Sbjct 1238 AGCCTGAGGTAGATTGGCAGAGTTATAAGAACTGTGATAGCCCACCATTGCATTTTAACA 1297
Query 412 TCTCCCACACAGATTCATTAATTGCCTGTGGGGTGACTGTACATGTTCCGGTTGGTATCG 471
||||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| |
Sbjct 1298 TCTCCCACACAGATTCATTGATTTCCTGTGGAGTGACTGTACATGTTCCTGTTGGTATTG 1357
Query 472 ATGTTGAAGACAA-GGAAAGGAAGATTAAACATGACGTCTTAGCATTTGCAGAAAGATTC 530
|| ||||||| || |||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 1358 ATCTTGAAGA-AATGGAAAGGAAGATAAAACATGATGTCTTAGCATTAGCAGAAAGATTT 1416
Query 531 TACTCTGCTGATGAAGTGAAGTTTTTGTCAACTATACCGGACCCGGAAAG-TCAGCGAAA 589
|||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct 1417 TACTCTGCTGATGAAGTGAAGTTTTTGTCAGCTATACCAGACCCGG-AAGTTCAGCGAAA 1475
Query 590 GGAGTTTATTAAGTTATGGACTCTAAAGGAGGCATATGTGAAAGCATTAGGAAAAGGGTT 649
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||
Sbjct 1476 GGAGTTTATTAAGTTATGGACTCTTAAGGAAGCATATGTGAAAGCATTAGGAAAAGGCTT 1535
Query 650 TTCTGCTGCACCTTTTAATACCTTCACAATCCAATCTAAGGCTGGAACAAAAGGAGAATA 709
|||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||
Sbjct 1536 CTCTGGTGCACCTTTTAATACCTTCACAATCCAGTCTAAGGCTGGAACAAATGGAGGCTA 1595
Query 710 CAATCTTT 717
||||||||
Sbjct 1596 CAATCTTT 1603
Score = 189 bits (102), Expect = 4e-47
Identities = 128/140 (91%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 715 TTTGCAAGACATCTGAAATGACT-ACCAGTTCACTGGAGAAGACAAACAATTGCAACGGA 773
||||||| |||||||||||| || | | ||||| |||||||||||| || |||||||||
Sbjct 1635 TTTGCAA-ACATCTGAAATGTCTGTCGA-TTCACAGGAGAAGACAAAGAAATGCAACGGA 1692
Query 774 GGATGGAAGTTTTCCCTTTTGGAGTTGGCTGATTCTCATTATGCTGCAATCTGTATTGAA 833
| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693 GAATGGAAGTTTGCCCTATTGGAGTTGGCTGATTCTCATTATGCTGCAATCTGTATTGAA 1752
Query 834 GATGATCAAGCTAGTGGAGG 853
||||||||||||||||||||
Sbjct 1753 GATGATCAAGCTAGTGGAGG 1772
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46567054269
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5