BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928863
Length=1187
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11480.1 | Symbols: BSMT1, ATBSMT1 | S-adenosyl-L-methionine... 1738 0.0
AT5G04370.2 | Symbols: NAMT1 | S-adenosyl-L-methionine-dependen... 704 0.0
> AT3G11480.1 | Symbols: BSMT1, ATBSMT1 | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein | chr3:3614437-3617314
FORWARD LENGTH=1424
Length=1424
Score = 1738 bits (941), Expect = 0.0
Identities = 1090/1163 (94%), Gaps = 5/1163 (0%)
Strand=Plus/Plus
Query 2 AATCAGTACGATACTTAAAATGGATCCAAGATTCATCGACACCATTCCTTCCTTGAGTTA 61
||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 89 AATAAGTACGATAATTGAAATGGATCCAAGATTCATCAACACCATTCCTTCCTTGAGGTA 148
Query 62 TAATGATGATAAGTGTGATGATGAATATGCATTTGTGAAAGCTCTATGTATGAGTGGTGG 121
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 149 TGATGATGATAAGTGTGATGATGAATATGCGTTTGTGAAAGCTCTATGTATGAGTGGTGG 208
Query 122 AGATGGAACCAACAGTTACTCCACCAATTCTCGTCTTCAGAGAAAAGTTTTAACAATGGC 181
|||||| |||||||||||||| |||||||||| ||||||| |||||||||| |||||||
Sbjct 209 AGATGGTGCCAACAGTTACTCCGCCAATTCTCGCCTTCAGAAAAAAGTTTTATCAATGGC 268
Query 182 CAAACCAGTCTTGGTAA-AAACCACAGAAGAAATGATGATGAGCTTAGACTTTCCTACGT 240
||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||
Sbjct 269 CAAACCAGTCTTGGTAAGAAA-CACAGAAGAAATGATGATGAACTTAGACTTTCCTACGT 327
Query 241 ACATCAAAGTTGCTGAATTGGGTTGTTCTTCGGGACAAAACACGTTTTTGGCTATCTCTG 300
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||
Sbjct 328 ACATCAAAGTTGCTGAATTGGGTTGTTCTTCGGGACAAAACTCTTTTTTGGCTATCTTTG 387
Query 301 AGATCATCAACACCATTAGTGTGTTGTGCCAACATGTGAACAAAAACCCACCAGAAATAG 360
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || |
Sbjct 388 AGATCATCAACACCATTAATGTGTTGTGCCAACATGTGAACAAAAACTCACCAGAGATCG 447
Query 361 ATTGTTGTCTGAACGATCTCCCGGAAAACGATTTCAACACGACCTTCAAGTTCGTACCAT 420
|||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 448 ATTGTTGTCTAAACGATCTCCCGGAAAATGATTTCAACACGACCTTTAAGTTCGTACCTT 507
Query 421 TCTTCAACAAGGAGCTCATGATCACAAGCAAAGCATCGTGCTTCGTCTATGGAGCTCCAG 480
||||||||||||||||||||||||||| |||| |||| || |||||||||||||||||||
Sbjct 508 TCTTCAACAAGGAGCTCATGATCACAAACAAATCATCATGTTTCGTCTATGGAGCTCCAG 567
Query 481 GTTCCTTCTATTCCAGACTCTTCTCCCGCAATAGCCTCCATATCATACATTCCTCGTATG 540
|||||||||||||||| |||||||| ||||||||||||||| | ||||||||||| ||||
Sbjct 568 GTTCCTTCTATTCCAGGCTCTTCTCTCGCAATAGCCTCCATTTAATACATTCCTCTTATG 627
Query 541 CCCTCCATTGGCTCTCTAAGGTTCCCGAAAAACTTGAGAATAATAAGGGGAATGTGTACA 600
| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 628 CACTCCATTGGCTCTCTAAGGTTCCCGAGAAACTTGAGAATAATAAGGGGAATCTGTACA 687
Query 601 TAACAAGTTCAAGTCCTCAAAGTGCATACAAAGCTTACTTGAATCAATTCCAAAAAGATT 660
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 688 TAACAAGTTCAAGTCCTCAAAGTGCATACAAGGCCTACTTGAATCAATTCCAAAAAGACT 747
Query 661 TCTCCATGTTTCTAAGGTTACGTTCTGAAGAAATTGTCTCTAATGGACGTATGGTTCTCA 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 TCACCATGTTTCTAAGGTTACGTTCTGAAGAAATTGTCTCTAATGGACGTATGGTTCTCA 807
Query 721 CCTTCATCGGGAGAAACACTCTGAACGATCCATTGTATAGAGATTGTTGTCACTTTTGGA 780
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 808 CCTTCATCGGAAGAAACACTCTTAACGATCCATTGTATAGAGATTGTTGTCACTTTTGGA 867
Query 781 CATTGCTATCAAAATCTCTCCGCGACCTACTCTTCGAGGGTCTTGTGAGTGAATCAAAGC 840
||||||||||||| |||||||| |||||| |||| ||||||||||||||||| |||||||
Sbjct 868 CATTGCTATCAAACTCTCTCCGTGACCTAGTCTTTGAGGGTCTTGTGAGTGAGTCAAAGC 927
Query 841 TGGATGCATTCAACATGCCGTTTTATGATCCGAACGTACAAGAACTCAAACAAGTGATAC 900
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 928 TGGACGCATTCAACATGCCGTTTTATGATCCGAACGTACAAGAACTCAAAGAAGTGATAC 987
Query 901 GAAACGAGGGCTCTTTTGAAATCAATGAATTGGAGACGCATGGATTCGATCTTGGTCATA 960
||| |||||||||||||||||||||||||||||| | |||||||| |||||||||||
Sbjct 988 AAAAAGAGGGCTCTTTTGAAATCAATGAATTGGAGTCACATGGATTTGATCTTGGTCAC- 1046
Query 961 GTAACTACGAAGAAGATGACTATGAAGCAGGACACGATGAAGCCAATTGTATAAGAGCTG 1020
|| ||||||||||||||||| ||||||||||| | ||||||| ||| | ||||||||||
Sbjct 1047 -TA-CTACGAAGAAGATGACTTTGAAGCAGGACGCAATGAAGCTAATGGCATAAGAGCTG 1104
Query 1021 TTAGTGAACCAATGCTCGTTGCTCATTTTGGAGAAGACATTATCGATACCTTGTTCGATA 1080
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1105 TTAGTGAACCAATGCTCATTGCTCATTTTGGAGAAGAAATTATCGATACCTTGTTCGATA 1164
Query 1081 AGTATGCACACCATGTGACTCAGCATGCCAACTGCAGGAACAAAACGACTGTCAGTCTTG 1140
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1165 AGTATGCATACCATGTGACTCAACATGCCAACTGCAGGAACAAAACGACTGTCAGTCTTG 1224
Query 1141 TCGTTTCGTTGACTAAGAAATAA 1163
||||||| ||||||||||| |||
Sbjct 1225 TCGTTTCCTTGACTAAGAAGTAA 1247
> AT5G04370.2 | Symbols: NAMT1 | S-adenosyl-L-methionine-dependent
methyltransferases superfamily protein | chr5:1231697-1234147
FORWARD LENGTH=1666
Length=1666
Score = 704 bits (381), Expect = 0.0
Identities = 851/1075 (79%), Gaps = 44/1075 (4%)
Strand=Plus/Plus
Query 108 TGTATGAGTGGTGGAGATGGA-ACCAACAGTTACTCCACCAATTCTCGTCTTCAGAGAAA 166
|||||| |||| ||||||||| | ||| |||||||||| |||||||| |||||||||||
Sbjct 334 TGTATGCGTGGAGGAGATGGATA-CAATAGTTACTCCAGCAATTCTCTTCTTCAGAGAAG 392
Query 167 AGTTTTAACAATGGCCAAACCAGTCTTGG-TAAAAACCACAGAA-GAAATGATGATGAGC 224
||| ||| ||| ||| ||||| || |||| ||| || |||| || || ||||||| | |
Sbjct 393 AGTGTTATCAAAGGCTAAACCGGTATTGGTTAAGAA-CACA-AAGGACCTGATGATAAAC 450
Query 225 TTAGACTTTCCTACGTACATCAAAGTTGCTGAATTGGGTTGTTCTTCGGGACAAAACACG 284
||| |||||||||| ||||| ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 451 TTAAACTTTCCTACATACATTAAAGTAGCTGATTTGGGCTGTTCATCAGGACAGAATACG 510
Query 285 TTTTTGGCTATCTCTGAGATCATCAACACCATTAGTGTGTTGTGCCAACATG-TGAACAA 343
|| ||||| || ||||| || ||||| || || | |||||| || ||||| | |||| |
Sbjct 511 TTCTTGGCAATGTCTGAAATTATCAATACAATCAATGTGTTTTGTCAACA-GAGGAACCA 569
Query 344 AAACCCACCAGAAATAGATTGTTGTCTGAACGATCTCCCG-GAAAACGATTTCAACACGA 402
||||||||||||||||||||||||||| || |||||||| | || |||||| ||||| |
Sbjct 570 AAACCCACCAGAAATAGATTGTTGTCTAAATGATCTCCCTAGTAA-CGATTTTAACACAA 628
Query 403 CCTTCAAGTTCGTACCATTCTTCAACAAGGAGCTCATGATCACAAGCAAAGCATCGTGCT 462
| ||||| ||| ||| ||||||||| ||| | | ||||| ||||||| ||| | ||
Sbjct 629 CGTTCAAATTCATACAATTCTTCAATG-GGA--TGAACATCACGAGCAAAGAATCATACT 685
Query 463 TCGTCTATGGAG-CTCCAGGTTCCTTCTATTCCAGACTCTTCTCC-CGCAATAGCCTCCA 520
| |||||||||| | || ||||| ||||| || || |||||| || || | || || ||
Sbjct 686 TTGTCTATGGAGTCCCC-GGTTCTTTCTACTCGAGGCTCTTC-CCTCGGAGGAGTCTTCA 743
Query 521 TATCATACATTCCTCGTATGCCCTCCATTGGCTCTCTAAGGTTCCCGAAAAACTTGAGAA 580
| || |||||||||| |||| ||||||||||||||||||||||| ||| ||||||||
Sbjct 744 TTTCGTACATTCCTCTTATGGTCTCCATTGGCTCTCTAAGGTTCCTGAAGGGCTTGAGAA 803
Query 581 TAATAAGGGGAATGTGTACATAACAAGTTCAAGTCCTCAAAGTGCATACAAAGCTTACTT 640
|||||| || ||||||||| |||| ||||||||||| ||| ||||||| ||||||||
Sbjct 804 GAATAAGATGAGTGTGTACATCACAAATTCAAGTCCTCTAAGCACATACAAGGCTTACTT 863
Query 641 GAATCAATTCCAAAAAGATTTCTCC-ATGTTTCT-AAGGTTACGTTCTGAAGAAATTGTC 698
||||||||||||| |||||| | | | || || || | ||||||||||| || ||
Sbjct 864 AAATCAATTCCAAAGAGATTT-TGCGACATTCCTTAAACTG-CGTTCTGAAGAGATGGTT 921
Query 699 TCTAATGGACGTATGGTTCTCACCTTCATCGGGAGAAACACTCT-GA-ACGATCCATTGT 756
||||||||||| ||||||||||| ||||| || |||||||| | || | ||||||||
Sbjct 922 TCTAATGGACGCATGGTTCTCACTTTCATTGGTCGAAACACTATTGATA--ATCCATTGC 979
Query 757 ATAGAGATTGTTGTCACTTTTGGACATTGCTATCAAAATCTCTCCGCGACCTACTCTTCG 816
|||||||||||||||||||||||||||| |||| |||||||| || |||||| || ||
Sbjct 980 ATAGAGATTGTTGTCACTTTTGGACATTATTATCCAAATCTCTTCGTGACCTAGTCGCCG 1039
Query 817 AGGGTCTTGTGAGTGAATCAAAGCTGGATGCATTCAACATGCCGTTTTATGATCCGAACG 876
|||| |||||||||| ||||||| | ||| ||||| || | ||||||||||| || ||||
Sbjct 1040 AGGGCCTTGTGAGTGCATCAAAGGTAGATTCATTCTACTTACCGTTTTATGACCCCAACG 1099
Query 877 TACAAGAACTCAAACAAG-TGATAC-GAAACGAGGGCTCTTTTGAAATCA-ATGAATTGG 933
| ||||| | ||| || || ||| |||| || || || |||||||||| | || ||||
Sbjct 1100 AAAAAGAAAT-AAAGGAGATGGTACAGAAA-GAAGGTTCCTTTGAAATCAGA-GACTTGG 1156
Query 934 AGACGCATGGAT-TCGATCTTGGTCATAGTAACTACGA--AG--AA-GATGAC-TATGAA 986
|||| ||||||| | |||||||| ||| ||||| | || || || || || || ||
Sbjct 1157 AGACACATGGATAT-GATCTTGGCCATTGTAACCAAGACGAGTCAAAGA-GAAGTA--AA 1212
Query 987 GCAGGACACGATGAAGCCAATTGTATAAGAGCTGTTAGTGAACCAATGCTCGTTGCTCAT 1046
|||| || ||||||| |||| || ||||| || ||||||||| |||| | |||||
Sbjct 1213 TCAGGGCAAAATGAAGCTAATTACATCAGAGCGGTGAGTGAACCACTGCTTGCGGCTCAC 1272
Query 1047 TTTGGAGAAGACATTATCGATACCTTGTTCGATAAGTATGCACACCATGTGACTCAGCAT 1106
|||||||| | ||||||| | | ||||| | |||| |||| |||||| |||| |||
Sbjct 1273 TTTGGAGATGCCATTATCAACATATTGTTTAACAAGTTTGCATGTCATGTGTCTCAACAT 1332
Query 1107 GCCAACTGCAGGAACAAAACGACTGTCAGTCTT-GTCGTTTCGTTGACTAAGAAA 1160
| | ||||||||||||||||| ||||| | | |||||||| |||||||||||
Sbjct 1333 GTTAGTTGCAGGAACAAAACGACCGTCAG-CATAGTCGTTTCACTGACTAAGAAA 1386
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58282832745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5