BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928882
Length=2470
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11670.1 | Symbols: DGD1 | UDP-Glycosyltransferase superfami... 3984 0.0
> AT3G11670.1 | Symbols: DGD1 | UDP-Glycosyltransferase superfamily
protein | chr3:3680893-3684558 REVERSE LENGTH=2687
Length=2687
Score = 3984 bits (2157), Expect = 0.0
Identities = 2363/2466 (96%), Gaps = 0/2466 (0%)
Strand=Plus/Plus
Query 1 GAAACGATAAACCCTAAATCATGGTAAAGGAAACTCTAATTCCTCCGTCTTCTACGTCAA 60
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 44 GAAACGATAAACCCTAAGTCATGGTAAAGGAAACTCTAATTCCTCCGTCATCTACGTCAA 103
Query 61 TGGCGACCGGTACGGCGACGTCTTCGTCTCTTTCAATGACGTTGTCATCAACAAACGCGT 120
|| ||||||| || | | ||||||||||||||||||||||| || |||||||||||||
Sbjct 104 TGACGACCGGAACATCTTCTTCTTCGTCTCTTTCAATGACGTTATCCTCAACAAACGCGT 163
Query 121 TATCGTTTTTGTCGAAAGGTTGGAGAGAGGTATGGGATTCAGCAGATGCGGATTTGCAGT 180
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 164 TATCGTTTTTGTCGAAAGGATGGAGAGAGGTATGGGATTCAGCAGATGCGGATTTGCAGC 223
Query 181 TGATGCGAGACAGAGCTAACTCCGTTAAGAATCTAGCATCGACGTTCGACAGAGAGATCG 240
|||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 224 TGATGCGAGACAGAGCTAACTCTGTTAAGAATCTAGCATCAACGTTCGATAGAGAGATCG 283
Query 241 AGAATTTCCTCAATAATTCGGCCAGGTCTGCGTTTCCCGTCGGGTCACCATCGGCGTCTT 300
|||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||| |
Sbjct 284 AGAATTTCCTCAATAACTCGGCGAGGTCTGCGTTTCCCGTTGGTTCACCATCGGCGTCGT 343
Query 301 CTTTCTCAAGTGAAATTGGTATCATGAAGAAGCTTCAGCCGAAGATTTCGGAGTTTCGTA 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 CTTTCTCAAATGAAATTGGTATCATGAAGAAGCTTCAGCCGAAGATTTCGGAGTTTCGTA 403
Query 361 GGGTTTATTCGGCGCCGGAGATTAGTCGTAAGGTTATGGAGAGATGGGGACCAGCGAGAG 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 404 GGGTTTATTCGGCGCCGGAGATTAGTCGCAAGGTTATGGAGAGATGGGGACCTGCGAGAG 463
Query 421 CGAAGCTGGGAATGGATCTATCGGCGATTAAGAAGGCGATTGTGTCTGAGATGGAATTGG 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 464 CGAAGCTTGGAATGGATCTATCGGCGATTAAGAAGGCGATTGTGTCTGAGATGGAATTGG 523
Query 481 ATGAGCGTCAGGGAGTTTTAGAGATGGGTAGATTGAGGAGACGGCGTAATAGTGACAGGG 540
||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||
Sbjct 524 ATGAGCGTCAGGGAGTTTTGGAGATGAGTAGATTGAGGAGACGGCGTAATAGTGATAGGG 583
Query 541 TTAGGTTTACGGAGTTTTTCGCGGAGGCTGAGAGAGATGGAGAAGGTAATTTCGGTGATT 600
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 584 TTAGGTTTACGGAGTTTTTCGCGGAGGCTGAGAGAGATGGAGAAGCTTATTTCGGTGATT 643
Query 601 GGGAACCGATTAGGTCTTTGAAGACTAGATTTAAAGAGTTTGAGAAACGAAACTCGTTAG 660
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 644 GGGAACCGATTAGGTCTTTGAAGAGTAGATTTAAAGAGTTTGAGAAACGAAGCTCGTTAG 703
Query 661 AAATATTGAGTGGATTCAAGAACAGCGAATTTGTGGAGAAGCTCAAAACCAGCTTTAAAT 720
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 704 AAATATTGAGTGGATTCAAGAACAGTGAATTTGTTGAGAAGCTCAAAACCAGCTTTAAAT 763
Query 721 CAATTTACAAAGAAACTGATGAGGCTAAGGATGTCCCTCCATTGGATGTACCTGAACTTT 780
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 764 CAATTTACAAAGAAACTGATGAGGCTAAGGATGTCCCTCCGTTGGATGTACCTGAACTGT 823
Query 781 TGGCCTGTTTGGTTAGACAGTCTGAACCTTTTCTTGATCAGATTGGTGTTAGAAAGGATA 840
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 824 TGGCATGTTTGGTTAGACAATCTGAACCTTTTCTTGATCAGATTGGTGTTAGAAAGGATA 883
Query 841 TGTGCGACCGAATAGTAGAAAGCCTTTGCAAATGCAAGAGCCAACACCTTTGGCGTCTGC 900
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 884 CATGTGACCGAATAGTAGAAAGCCTTTGCAAATGCAAGAGCCAACAACTTTGGCGTCTGC 943
Query 901 CATCTGCACAAGCATCCGATTTAATTGAAAATGATAATCATGGAGTTGATTTGGATATGA 960
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 944 CATCTGCACAAGCATCCGATTTAATTGAAAATGATAACCATGGAGTTGATTTGGATATGA 1003
Query 961 GGATAGCCAGTGTTCTTCAAAGCACAGGACACCATTATGATGGTGGCTTTTGGACTGATT 1020
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1004 GGATAGCCAGTGTTCTTCAAAGCACAGGACACCATTATGATGGTGGGTTTTGGACTGATT 1063
Query 1021 TTGTGAAGCCTGAGACATCAGAAAATAAAAGGCATGTGGCAATTGTTACAACAGCTAGTC 1080
||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1064 TTGTGAAGCCTGAGACACCGGAAAACAAAAGGCATGTGGCAATTGTTACAACAGCTAGTC 1123
Query 1081 TCCCTTGGATGACCGGAACAGCTGTAAATCCACTATTCAGAGCGGCGTATTTGGCAAAAT 1140
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1124 TTCCTTGGATGACCGGAACAGCTGTAAATCCGCTATTCAGAGCGGCGTATTTGGCAAAAG 1183
Query 1141 CTGCAAAACAGAGTGTTACACTTGTAGTTCCTTGGCTCTGCGAATCTGATCAAGAACTAG 1200
||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 1184 CTGCAAAACAGAGTGTTACTCTCGTGGTTCCTTGGCTCTGCGAATCTGATCAAGAACTAG 1243
Query 1201 TTTATCCAAACAATCTCACCTTTAGTTCACCTGAAGAACAAGAGAGCTATATACGTAAAT 1260
| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct 1244 TGTATCCAAACAATCTCACCTTCAGCTCACCTGAAGAACAAGAGAGTTATATACGTAAAT 1303
Query 1261 GGTTGGAGGAAAGGATTGGTTTCAAGGCTGATTTTAAAATCTCTTTTTACCCAGGAAAGT 1320
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1304 GGTTGGAGGAAAGGATTGGTTTCAAGGCTGATTTTAAAATCTCCTTTTACCCAGGAAAGT 1363
Query 1321 TTTCAAAAGAAAGGCGTAGCATATTTCCTGCTGGTGACACTTCTCAATTTATATCGTCAA 1380
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 TTTCAAAAGAAAGGCGCAGCATATTTCCTGCTGGTGACACTTCTCAATTTATATCGTCAA 1423
Query 1381 AAGATGCTGACATTGCTATACTTGAAGAACCTGAGCATCTCAACTGGTACCATCACGGCA 1440
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1424 AAGATGCTGACATTGCTATACTTGAAGAACCTGAACATCTCAACTGGTATTATCACGGCA 1483
Query 1441 AGCGTTGGACCGATAAATTCAACCATGTTGTTGGAATTGTCCACACAAACTACTTAGAGT 1500
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1484 AGCGTTGGACTGATAAATTCAACCATGTTGTTGGAATTGTCCACACAAACTACTTAGAGT 1543
Query 1501 ACATCAAGAGGGAGAAGAATGGTGCTCTTCAAGCATTTTTTGTGAATCATGTAAACAATT 1560
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1544 ACATCAAGAGGGAGAAGAATGGAGCTCTTCAAGCATTTTTTGTGAACCATGTAAACAATT 1603
Query 1561 GGGTCACACGAGCATATTGTGACAAGGTTCTTCGTCTCTCTGGGGCAACACAAGATTTAC 1620
||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1604 GGGTCACACGAGCGTATTGTGACAAGGTTCTTCGCCTCTCTGCGGCAACACAAGATTTAC 1663
Query 1621 CAAAATCTGTTGTATGCAATGTCCACGGTGTCAATCCCAAGTTCCTTATGATTGGGGGGA 1680
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 1664 CAAAGTCTGTTGTATGCAATGTCCATGGTGTCAATCCCAAGTTCCTTATGATTGGGGAGA 1723
Query 1681 AAATTGCTGAAGAGAGATCCCGTGGTGAACAAGCTTTCTCCAAAGGTGCATACTTCTTAG 1740
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1724 AAATTGCTGAAGAGAGATCCCGTGGTGAACAAGCTTTCTCAAAAGGTGCATACTTCTTAG 1783
Query 1741 GAAAAATGGTGTGGGCTAAAGGATACAGAGAACTAATAGATCTGATGGCTAAGCACAAAA 1800
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1784 GAAAAATGGTGTGGGCTAAAGGATACAGAGAACTAATAGATCTGATGGCTAAACACAAAA 1843
Query 1801 GCGAACTCGGGAGCTTCAATCTAGATGTCTATGGGAACGGTGAAGATGCAGTCGAAGTCC 1860
||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1844 GCGAACTTGGGAGCTTCAATCTAGATGTATATGGGAACGGTGAAGATGCAGTCGAGGTCC 1903
Query 1861 AACGTGCAGCAAAGAAACATGACTTAAATCTCAATTTCCTCAAAGGAAGGGACCACGCCG 1920
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1904 AACGTGCAGCAAAGAAACATGACTTGAATCTCAATTTCCTCAAAGGAAGGGACCACGCTG 1963
Query 1921 ACGATTCTCTTCACAAGTACAAAGTGTTCATAAACCCCAGCATCAGCGATGTTCTATGCA 1980
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1964 ACGATGCTCTTCACAAGTACAAAGTGTTCATAAACCCCAGCATCAGCGATGTTCTATGCA 2023
Query 1981 CAGCAACCGCAGAAGCACTAGCCATGGGGAAGTTTGTGGTGTGTGCAGATCATCCTTCAA 2040
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2024 CAGCAACCGCAGAAGCACTAGCCATGGGGAAGTTTGTGGTGTGTGCAGATCACCCTTCAA 2083
Query 2041 ACGAATTCTTCAGATCATTCCCGAACTGCTTAACTTACAAAACATCCGAAGACTTTGTGT 2100
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2084 ACGAATTCTTTAGATCATTCCCGAACTGCTTAACTTACAAAACATCCGAAGACTTTGTGT 2143
Query 2101 CCAAAGTGAAAGAAGCAATGACGAAGGAGCCATTACCTCTCACTCCAGAGCAAATGTACA 2160
|||||||| |||||||||||||||| |||||| ||||||||||||| || ||||||||||
Sbjct 2144 CCAAAGTGCAAGAAGCAATGACGAAAGAGCCACTACCTCTCACTCCTGAACAAATGTACA 2203
Query 2161 ATCTCTCTTGGGAAGCAGCAACACAGAGGTTCATGGAGTATTCAGATCTCGATAAGATCT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2204 ATCTCTCTTGGGAAGCAGCAACACAGAGGTTCATGGAGTATTCAGATCTCGATAAGATCT 2263
Query 2221 TAAATGATGGAGATGGAGGAAGGAGGATGCGAAAATCAAGATCAGTTCCGAGCTTTAACG 2280
|||| ||||||| |||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 2264 TAAACAATGGAGAGGGAGGAAGGAAGATGCGAAAATCAAGATCGGTTCCGAGCTTTAACG 2323
Query 2281 AGATGGTCGATGGAGGGTTAGCATTCACACACTATGTTCTAACAGGGAACGATTTCTTGA 2340
|| ||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 2324 AGGTGGTCGATGGAGGATTGGCATTCTCACACTATGTTCTAACAGGGAACGATTTCTTGA 2383
Query 2341 GACTATGCACAGGAGCAACACCAAGAACAAAAGATTATGATAAGCAACATTGCAAGGATC 2400
|||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 2384 GACTATGCACTGGAGCAACACCAAGAACAAAAGACTATGATAATCAACATTGCAAGGATC 2443
Query 2401 TGAATCTTGTTCCGCCTCACGTTCACAAGCCAATCTTTGGCTGGTAGATATTTCCCCAGA 2460
||||||| || || ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 2444 TGAATCTCGTACCACCTCACGTTCACAAGCCAATCTTCGGCTGGTAGATATTTCCCCATA 2503
Query 2461 GGCCAC 2466
||||||
Sbjct 2504 GGCCAC 2509
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122557841749
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5