BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg928978
Length=1996
Score E
Sequences producing significant alignments: (Bits) Value
AT3G12580.1 | Symbols: HSP70, ATHSP70 | heat shock protein 70 |... 3157 0.0
AT1G56410.1 | Symbols: ERD2, HSP70T-1 | heat shock protein 70 (... 1158 0.0
> AT3G12580.1 | Symbols: HSP70, ATHSP70 | heat shock protein 70
| chr3:3991261-3993792 REVERSE LENGTH=2282
Length=2282
Score = 3157 bits (1709), Expect = 0.0
Identities = 1900/1994 (95%), Gaps = 5/1994 (0%)
Strand=Plus/Plus
Query 1 CCGGCGAACAATTCTGATCTC---TAATGGCGGGTAAAGGTGAAGGTCCAGCTATTGGTA 57
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 78 CCGGCGAACAATTCTGATCTCTAATAATGGCGGGTAAAGGTGAAGGTCCAGCTATCGGTA 137
Query 58 TCGATCTCGGTACAACTTACTCTTGCGTCGGTGTTTGGCAACATGACCGCGTTGAAATCA 117
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 138 TCGATCTCGGTACAACCTACTCTTGCGTCGGTGTTTGGCAACATGACCGCGTCGAAATCA 197
Query 118 TCGCCAACGATCAAGGCAACCGTACCACTCCTTCCTACGTTGCTTTCACTGATAGCGAGC 177
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 198 TCGCCAACGATCAAGGCAACCGCACCACTCCTTCCTACGTTGCTTTCACTGACAGCGAGC 257
Query 178 GTTTGATCGGAGACGCTGCCAAGAATCAAGTCGCCATGAACCCTACCAACACCGTCTTCG 237
|| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 GTCTCATCGGGGATGCTGCCAAGAATCAAGTCGCCATGAACCCTACCAACACCGTCTTCG 317
Query 238 ATGCTAAGCGTCTAATTGGAAGAAGATACAGTGATCCCTCTGTTCAAGCGGACAAGAGTC 297
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 318 ATGCTAAGCGTCTAATCGGAAGAAGATACAGTGATCCCTCTGTTCAAGCGGATAAGAGTC 377
Query 298 ACTGGCCTTTCAAGGTTATTTCTGGTCCTGGTGAGAAGCCTATGATCGTGGTCAACCACA 357
|||||||||| |||||| |||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct 378 ACTGGCCTTTTAAGGTTGTTTCCGGTCCAGGTGAGAAGCCTATGATTGTGGTTAACCACA 437
Query 358 AGGGAGAGGAGAAACAGTTCTCTGCTGAGGAAATCTCCTCGATGGTTCTCGTTAAGATGC 417
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 438 AGGGAGAGGAGAAACAGTTCTCTGCTGAGGAAATCTCGTCGATGGTTCTTATTAAGATGC 497
Query 418 GCGAGATTGCAGAAGCTTTCCTTGGCTCTCCGGTTAAGAACGCTGTGGTTACAGTTCCTG 477
| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 498 GGGAGATTGCAGAAGCTTTCCTTGGTTCTCCTGTTAAGAACGCTGTCGTTACAGTTCCTG 557
Query 478 CTTATTTCAACGACTCTCAGCGTCAGGCGACTAAGGACGCTGGAGTTATCTCTGGTCTCA 537
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 558 CTTATTTCAACGACTCTCAGCGTCAAGCGACTAAGGACGCTGGAGTTATCTCTGGTCTCA 617
Query 538 ATGTCATGCGTATCATCAATGAGCCAACTGCTGCTGCTATTGCATACGGTCTTGACAAGA 597
| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 618 ACGTGATGCGTATCATCAATGAGCCAACTGCTGCTGCTATTGCTTACGGTCTTGACAAGA 677
Query 598 AGGCGTCGAGTGTCGGCGAGAAGAATGTTCTT-ATCTTTGATTTGGGCGGTGGTACTTTT 656
||||||||||||| ||||||||||||||| || |||||||||||||| ||||||||||||
Sbjct 678 AGGCGTCGAGTGTTGGCGAGAAGAATGTT-TTGATCTTTGATTTGGGAGGTGGTACTTTT 736
Query 657 GATGTGTCTTTGCTTACGATTGAGGAAGGTATCTTTGAAGTGAAGGCCACGGCTGGTGAC 716
||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct 737 GATGTGTCTTTGCTTACGATTGAGGAAGGTATCTTTGAAGTCAAGGCAACTGCTGGTGAC 796
Query 717 ACGCATCTTGGTGGTGAGGACTTTGACAACAGGATGGTTAATCATTTTGTTCAGGAGTTT 776
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 797 ACGCATCTTGGTGGTGAGGACTTCGACAACAGGATGGTTAATCATTTTGTTCAGGAGTTT 856
Query 777 AAGAGGAAGAACAAGAAGGATATTACTGGCAACCCGAGAGCTTTGAGGAGGCTCAGGACA 836
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 857 AAGAGGAAGAACAAGAAGGATATTACTGGGAACCCGAGAGCTTTGAGGAGGCTTAGGACA 916
Query 837 GCTTGTGAGCGGGCGAAGAGAACTCTTTCTTCGACTGCTCAGACGACTATAGAGATCGAC 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 917 GCTTGTGAGCGGGCGAAGAGAACTCTTTCTTCGACTGCTCAGACGACTATAGAGATTGAC 976
Query 897 TCTCTTTTTGAGGGTATTGATTTCTACACAACCATCACTCGTGCTAGGTTCGAGGAGCTC 956
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 977 TCTCTTTTTGAGGGTATTGATTTCTACACTACCATCACTCGTGCTAGGTTCGAGGAGCTC 1036
Query 957 AACATGGATTTATTTAGGAAGTGTATGGAACCAGTGGAGAAGTGTTTGAGAGATGCTAAG 1016
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1037 AACATGGATTTGTTTAGGAAGTGTATGGAGCCAGTGGAGAAGTGTTTGAGGGATGCTAAG 1096
Query 1017 ATGGACAAGAACAGTGTCCATGATGTTGTTCTTGTTGGTGGTTCTACAAGAATCCCCAAG 1076
|||||||||| |||||| ||||||||||||||||||||||| |||||||| || |||||
Sbjct 1097 ATGGACAAGAGCAGTGTTCATGATGTTGTTCTTGTTGGTGGCTCTACAAGGATTCCCAAA 1156
Query 1077 GTGCAGCAGCTATTGCAAGACTTTTTCAACGGGAAAGAGCTCTGCAAAAGCATTAACCCT 1136
||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 1157 GTGCAGCAGCTTTTGCAAGACTTCTTCAATGGGAAAGAGCTCTGTAAAAGCATTAACCCG 1216
Query 1137 GACGAGGCTGTTGCTTATGGAGCAGCTGTTCAAGCTGCAATCTTGAGCGGTGAAGGGAAT 1196
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1217 GACGAGGCTGTTGCTTACGGAGCAGCTGTGCAAGCTGCAATCTTGAGCGGTGAAGGGAAT 1276
Query 1197 GAGAAGGTCCAAGACTTGTTGCTTCTTGATGTCACTCCTCTGTCCTTGGGTTTGGAAACT 1256
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1277 GAGAAGGTCCAGGACTTGTTACTTCTTGATGTCACTCCTCTGTCCTTGGGTTTGGAAACT 1336
Query 1257 GCCGGTGGTGTTATGACTGTCTTGATTCCGAGGAACACCACAATTCCGACCAAGAAAGAG 1316
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1337 GCCGGTGGTGTTATGACTGTTTTGATTCCGAGGAACACCACAATTCCGACCAAGAAAGAG 1396
Query 1317 CAGATCTTCTCTACATATTCAGACAACCAGCCCGGTGTACTGATCCAGGTCTACGAAGGA 1376
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 CAGATATTCTCTACCTATTCAGACAACCAGCCCGGTGTACTGATCCAGGTCTACGAAGGA 1456
Query 1377 GAGAGGGCACGGACAAAGGACAACAACCTTTTGGGAAAGTTCGAGCTCAGCGGTATACCA 1436
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1457 GAGAGGGCACGAACAAAGGACAACAACCTTTTGGGAAAGTTCGAGCTCAGTGGTATACCA 1516
Query 1437 CCTGCTCCACGAGGTGTTCCACAAATTACTGTCTGTTTCGACATCGACGCCAATGGTATC 1496
||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct 1517 CCTGCTCCACGAGGTGTACCGCAGATTACTGTCTGTTTCGACATCGACGCCAATGGTATC 1576
Query 1497 CTGAATGTTTCGGCTGAGGACAAGACGACTGGACAGAAGAACAAGATCACAATCACAAAC 1556
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1577 CTGAATGTGTCGGCTGAGGACAAGACGACTGGTCAGAAGAACAAGATCACAATCACAAAC 1636
Query 1557 GACAAGGGAAGGTTATCAAAGGAAGAGATCGAGAAGATGGTACAAGAAGCAGAGAAGTAC 1616
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1637 GACAAGGGAAGGTTATCAAAGGAAGAGATCGAGAAGATGGTACAAGAGGCAGAGAAGTAC 1696
Query 1617 AAGGCCGAGGATGAAGAACACAAGAAGAAGGTTGATGCAAAGAACGCTCTAGAGAACTAT 1676
||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1697 AAGGCTGAGGATGAAGAACACAAGAAGAAGGTGGATGCAAAGAACGCTCTCGAGAACTAT 1756
Query 1677 GCATACAACATGAGGAACACTATCAAGGACGAGAAGATCGCGTCGAAGCTTGATGCAGCT 1736
|||||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct 1757 GCATACAACATGAGGAACACGATCAAGGACGAGAAGATCGCATCTAAGCTTGACGCAGCT 1816
Query 1737 GACAAGAAGAAGATTGAGGATGCAATCGACCAAGCTATTGAATGGTTAGATGGGAATCAG 1796
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1817 GACAAGAAGAAGATTGAGGATGCAATCGACCAAGCTATTGAATGGTTAGATGGGAATCAA 1876
Query 1797 CTGGCTGAGGCAGATGAGTTTGAGGATAAGATGAAGGAGCTCGAGTCTATTTGCAACCCA 1856
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 1877 CTGGCTGAGGCAGATGAGTTCGAGGATAAGATGAAGGAGCTCGAGTCTCTTTGCAACCCT 1936
Query 1857 ATCATTGCAAGAATGTACCAAGGTGCCGGGCCTGATATGGGTGGTGCTGCAGGAATGGAT 1916
|| |||||||||||||||||||| || |||||||||||||||||||| | ||||||||||
Sbjct 1937 ATTATTGCAAGAATGTACCAAGGAGCTGGGCCTGATATGGGTGGTGCAGGAGGAATGGAT 1996
Query 1917 GACGATGCTCCTGCTGGTGGTAGCGGCGGTGCTGGCCCCAAGATTGAAGAAGTTGATTAA 1976
||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1997 GACGACACACCTGCTGGTGGTAGCGGCGGTGCTGGCCCAAAGATTGAAGAAGTTGATTAA 2056
Query 1977 GCTTTTTAGCTTTT 1990
|| |||| ||||||
Sbjct 2057 GCCTTTTGGCTTTT 2070
> AT1G56410.1 | Symbols: ERD2, HSP70T-1 | heat shock protein 70
(Hsp 70) family protein | chr1:21117147-21119241 FORWARD LENGTH=1854
Length=1854
Score = 1158 bits (627), Expect = 0.0
Identities = 1464/1858 (79%), Gaps = 98/1858 (5%)
Strand=Plus/Plus
Query 24 ATGGCGGGTAAAGGTGAAGGTCCAGCTATTGGTATCGATCTCGGTACAACTTACTCTTGC 83
||||| ||||| || ||||||||||| || || |||||||| ||||| || ||||||||
Sbjct 1 ATGGCTGGTAAGGGAGAAGGTCCAGCGATCGGAATCGATCTTGGTACTACGTACTCTTGT 60
Query 84 GTCGGTGTTTGGCAACATGACCGCGTTGAAATCATCGCCAACGATCAAGGCAACCGTACC 143
|| || || |||||||| ||||| ||||| ||||| || || |||||||| ||| | |||
Sbjct 61 GTTGGAGTATGGCAACACGACCGTGTTGAGATCATTGCTAATGATCAAGGTAACAGAACC 120
Query 144 ACTCCTTCCTACGTTGCTTTCACTGATAGC-GAGCGTTTGATCGGAGACGCTGCCAAGAA 202
|| ||||| |||||||||||||| || | ||||| |||||||| || ||||| |||||
Sbjct 121 ACACCTTCGTACGTTGCTTTCACCGA-CTCTGAGCGGTTGATCGGTGATGCTGCTAAGAA 179
Query 203 TCAAGTCGCCATGAACCCTACCAACACCGTCTTCGATGCTAAG-CGTCTAATTGGAAGAA 261
|||||| |||||||||||| |||||||| ||||| || ||| || | ||||| | |
Sbjct 180 TCAAGTTGCCATGAACCCTGTTAACACCGTTTTCGACGCAAAGAGGT-TGATTGGTCGTA 238
Query 262 GATACAGTGATCCCTCTGTTC-AAGCGGACAAG-AGTCACTGGCCTTTCAAGGTTATTTC 319
||| ||||||| | ||||| | |||| |||| | ||| ||||| |||||||| | |
Sbjct 239 GATTCAGTGATGCATCTGTCCAAAGC-GACATGAAGT-TTTGGCCCTTCAAGGTAACCCC 296
Query 320 TGGTCCTGGTGAGAAGCCTATGATCGTGGTCAACCACAAGGGAGAGGAGAAACAGTTCTC 379
||| | | || || || ||||| | || ||| |||| ||||| |||||||| ||| |
Sbjct 297 TGGACAAGCAGACAAACCAATGATTTTCGTAAACTACAAAGGAGAAGAGAAACAATTCGC 356
Query 380 TGCTGAGGAAATCTCCTCGATGGTTCTCGTTAAGATGCGCGAGATTGCAGAAGCTTTCCT 439
||| || |||||||| || ||||||||| |||||||||| ||||| || ||||||| |||
Sbjct 357 TGCGGAAGAAATCTCTTCAATGGTTCTCATTAAGATGCGTGAGATCGCTGAAGCTTACCT 416
Query 440 TGGCTCTCCGGTTAAGAACGCTGTGGTTACAGTTCCTGCTTATTTCAACGACTCTCAGCG 499
||| ||| || | |||||||||||||| || |||||||| || ||||| || ||||| ||
Sbjct 417 TGGTTCTTCGATCAAGAACGCTGTGGTCACTGTTCCTGCATACTTCAATGATTCTCAACG 476
Query 500 TCAGGCGACTAAGGACGCTGGAGTTATCT-CTGGTCTCAATGTCATGCGTATCATCAATG 558
|||||| || ||||||||||| || || | ||||| | ||||| |||||||||||||||
Sbjct 477 TCAGGCTACAAAGGACGCTGGTGTGAT-TGCTGGTTTGAATGTTTTGCGTATCATCAATG 535
Query 559 AGCCAACTGCTGCTGCTATTGCATACGGTCTTGACAAGAAGGCGTCGAGTGTCGGCGA-G 617
|||| || |||||||||||||| || ||||||||||||||||| | ||||| || |
Sbjct 536 AGCCGACGGCTGCTGCTATTGCTTATGGTCTTGACAAGAAGGCAACAAGTGTTGG-AATC 594
Query 618 AAGAATGTTCTT-ATCTTTGAT-TTGGGCGGTGGTACTTTTGATGTGTCT-TTGCTTACG 674
||||| | | || ||||||||| || || ||||||||||||||||| ||| || |||||
Sbjct 595 AAGAACG-TGTTGATCTTTGATCTT-GGTGGTGGTACTTTTGATGTTTCTCTT-CTTACC 651
Query 675 ATTGAGGAAGGTATCTTTGAAGTGAAGGCCACGGCTGGTGACACGCATCTTGGTGGTGAG 734
||||| ||||||||||| || || ||||| || ||||||||||| ||||||||||| ||
Sbjct 652 ATTGAAGAAGGTATCTTCGAGGTCAAGGCAACTGCTGGTGACACTCATCTTGGTGGCGAA 711
Query 735 GACTTT-GACAACAGGATGGTTAATCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAA 793
|| ||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 712 GA-TTTCGACAACAGAATGGTTAACCATTTTGTTCAAGAGTTTAAGAGGAAGAACAAGAA 770
Query 794 GGATATTA-CTGGCAACCCGAGAGCTTTGAGGAGGCTCAGGACAGCTTGTGAGCGGGCGA 852
|||||| | | || || | |||||| | ||||| | || || || || ||| | || |
Sbjct 771 GGATATCAGC-GGTGACGCAAGAGCTCTAAGGAGATTGAGAACTGCCTGCGAGAGAGCAA 829
Query 853 AGAGAACTCTTTCTTCGACTGCTCAGACGACTATAGAGATCGACTCTCTT-TTTGAGGGT 911
|||||||||||||||| || || || |||||| | ||| | |||||| || ||||||||
Sbjct 830 AGAGAACTCTTTCTTCAACCGCGCAAACGACTGTTGAGGTTGACTCT-TTGTTTGAGGGA 888
Query 912 ATTGATTTCTACACAACCA-TCACTCGTGCTAGGTTCGAGGAGCTCAACATGGATTTATT 970
||||||||||| | ||| |||||||||| | || || ||| | ||||||||| | ||
Sbjct 889 ATTGATTTCTATTCT-CCAATCACTCGTGCAAAATTTGAAGAGATGAACATGGATCTCTT 947
Query 971 TAGGAAGTGTATGGAACCAGTGGA-GAAGTGT-TT-GAGAGATGCTAAGATGGACAAGAA 1027
||||||||||||||| || || | ||||||| || | || | | |||||||||||| ||
Sbjct 948 TAGGAAGTGTATGGAGCCTGTT-ATGAAGTGTCTTCGTGACA-G-TAAGATGGACAA-AA 1003
Query 1028 -CAGTG-TCCATGATGTTGTTCTTGTTGGTGGTTCTACAAGAATCCCCAAGGTGCAGCAG 1085
|| || ||||||||||||| ||||| ||||||||||| | |||||||| || || |||
Sbjct 1004 GCA-TGGTCCATGATGTTGTCCTTGTCGGTGGTTCTACCCGTATCCCCAAAGTTCAACAG 1062
Query 1086 CTATTGCAAGACTTT-TTCAACGGGAAAGAGCTCTGCAAAAGC-ATTAACCCTGACGAGG 1143
|| || ||||| ||| ||||| || |||||||| ||||| | ||||||||||||||||
Sbjct 1063 CTTTTACAAGA-TTTCTTCAATGGTAAAGAGCTATGCAAGT-CTATTAACCCTGACGAGG 1120
Query 1144 CTGTTGCTTATGGAGCAGCTGTTCAAGCTGCAAT-CTTGAGCGGTGAAGGGAATGAGAAG 1202
| ||||| || || ||||||||||| ||||| || || |||||||||||||| || |||
Sbjct 1121 CCGTTGCATACGGTGCAGCTGTTCAGGCTGCGATTCTA-AGCGGTGAAGGGAACGAAAAG 1179
Query 1203 GTCCAAGA-CTTGTTGCTT-CTTGATGTCACTCCTCTGTCC-TTGGGT-TTGGAAACTGC 1258
|| ||||| ||| | ||| ||||||||||| ||||| ||| |||| | ||| ||||
Sbjct 1180 GTTCAAGATCTTCT--CTTGCTTGATGTCACACCTCTCTCCCTTGG-TATTG-AAACCAT 1235
Query 1259 CGGTGGTGTTATGACTGTCTT-GATTCCGAGGAA-CACCACAATTCCGACC-AAGAAAGA 1315
|||||||| ||||| ||| ||| || | ||| ||| ||||| || | | ||||| ||
Sbjct 1236 TGGTGGTGTCATGACCA-CTTTGAT-CCAAAGAAACACAACAATCCC-AGCTAAGAAGGA 1292
Query 1316 GCAG-ATCTTCTCTACATA-T-TCAGACAACCAGCCCG--GTGTACTGATCCAGGTCTAC 1370
||| | ||| | || || | | |||||||||||||| |||| ||||||| ||||||
Sbjct 1293 ACAGGAG-TTCACCAC-TACTGT-AGACAACCAGCCCGACGTGT--TGATCCAAGTCTAC 1347
Query 1371 GAAGGAGAGAGGGC-ACGGACAA-AGGACAACAACCTT-TTGGGAAAGTTCGAGCTCAGC 1427
||||| ||||| || | | || | || |||||||| | |||| || |||| ||| |
Sbjct 1348 GAAGGTGAGAGAGCTA-GAACCATAG-ACAACAACATCCTTGGTCAA-TTCGTGCTTT-C 1403
Query 1428 -GGTATACCACCTGCTCCACGAGGTGTTCCACAAATTACTGTCTG-TTTCGACATCGACG 1485
|| || || ||||||||||||||| | || || |||||||||| ||| ||||| |||
Sbjct 1404 TGGAATCCCTCCTGCTCCACGAGGTATCCCTCAGTTTACTGTCTGCTTT-GACATTGACT 1462
Query 1486 CCAATGGTATCCTGAATGTTTCGGCTGAGGACAAGACGACTGGACAGAAGAACAAGATCA 1545
||||||||||||| ||||| || |||||||||||| | |||||| | |||||||||||||
Sbjct 1463 CCAATGGTATCCTCAATGTCTCTGCTGAGGACAAGGCCACTGGAAAAAAGAACAAGATCA 1522
Query 1546 CAATCACAAACGACAAGGGAAGGT-TATC-AAAGGAAGAGATCGAGAAGATGGTACAAGA 1603
|||| || || ||||| || | | | || |||| | || || ||||||||||| |||||
Sbjct 1523 CAATAACTAATGACAAAGGTCG-TCTGTCCAAAG-ACGATATTGAGAAGATGGTGCAAGA 1580
Query 1604 AGCAGAGAAGTACAAGGCCGAGGATGAAGAACACAAGAAGAAGGTTGATGCAAAGAACGC 1663
||| |||||||||||| | |||||||| ||||||||||||||||| || || ||||| |
Sbjct 1581 AGCTGAGAAGTACAAGTCTGAGGATGAGGAACACAAGAAGAAGGTGGAAGCCAAGAATGG 1640
Query 1664 TCTAGAGAACTATGCATACAACATGAGGAACACTA-TCAAGGACGAGAAGATCGCGTC-G 1721
||| |||||||| || |||||| || ||||||| | || || || || | || |
Sbjct 1641 TCTTGAGAACTACGCTTACAACGTGGGGAACAC-ACTC-----CGTGAC-ATGG-GTGAG 1692
Query 1722 AAGCTTG-ATGCAGCTGACAAGAAGAAGATTGAGGA-TGCAATCGACCAAGCTATTG-AA 1778
|||||| | || || |||||||||||| |||| || | | || || | | || | ||
Sbjct 1693 AAGCTTCCA-GCTGCAGACAAGAAGAAGTTTGAAGACT-CTATTGAGGAGG-TAATCCAA 1749
Query 1779 TGG-TTAGATGGGAATCAGCTGGCTGAGGCAGATGAGTTTGAGGATAAGATGAAGGAG 1835
||| || || | || || |||||||||| || |||||||| | ||||||||||||
Sbjct 1750 TGGCTT-GACGATAACCAATTGGCTGAGGCTGACGAGTTTGAACACAAGATGAAGGAG 1806
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98895073650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5