BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929070
Length=1366
Score E
Sequences producing significant alignments: (Bits) Value
AT3G13320.1 | Symbols: CAX2, atcax2 | cation exchanger 2 | chr3... 2379 0.0
AT1G55730.1 | Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1... 1376 0.0
AT1G55720.1 | Symbols: ATCAX6, CAX6 | cation exchanger 6 | chr1... 1112 0.0
> AT3G13320.1 | Symbols: CAX2, atcax2 | cation exchanger 2 | chr3:4314529-4318351
FORWARD LENGTH=2120
Length=2120
Score = 2379 bits (1288), Expect = 0.0
Identities = 1340/1366 (98%), Gaps = 0/1366 (0%)
Strand=Plus/Plus
Query 1 TGTGTTGGTAGCACAAGGGTATGAGTTGTTGTAAAGTGCCAGTTCTTATTGAAGCACAAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TGTGTTGGTAGCACAAGGGTATGAGTTGTTGTAAAGTGCCAGTTCTTATTGAAGCACAAG 480
Query 61 TTGAAATGGTGTCGGCTAATGAACTTGAGAACAAAAGCCTATTTAGACAAGAAGAAGATG 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 481 TTGAAATGGTGTCGGCTAATGAACTTGAGAACAAAAGCCTATTTAGGCAAGAAGAAGATG 540
Query 121 CCGCACAAACTAAAGAAGCTTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTTCCCC 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 541 CCACACAAACTAAAGAAGCTTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTCCCCC 600
Query 181 AACACACGCCTAAAGCACCAAAGAATAGCGTACTTAATAGCATAAAGATCGTGATTTTTT 240
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 601 AGCACACGCCTAAAGCACCAAAGAACAGCGTACTTAATAGCATAAAGATCGTGATTTTTT 660
Query 241 GTAATAAACTCAATCTACTATTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGA 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 661 GTAATAAACTCAATCTACTACTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGA 720
Query 301 TAGATAGTAAGGGGTGGGTGTTCTTGCTGACCTTAGTAGGCATTACACCATTGGCTGAAC 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 721 TAGATAGTAAGGGGTGGGTGTTCTTGCTGACGTTAGTAGGCATTACACCATTGGCTGAAC 780
Query 361 GTCTAGGATATGCCACAGAGCAACTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCC 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 GTCTAGGATATGCCACAGAGCAACTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCT 840
Query 421 TAAATGCTACATTCGGGAATGTGACAGAGCTGATCATATCAATTTTCGCTTTGAAAAATG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TAAATGCTACATTCGGGAATGTGACAGAGCTGATCATATCAATTTTCGCTTTGAAAAATG 900
Query 481 GAATGATACGTGTTGTTCAGCTGACGTTACTAGGCTCGATTCTGTCTAACATGTTGCTTG 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 901 GAATGATACGTGTTGTTCAGCTGACGTTACTAGGCTCAATTCTGTCTAACATGTTACTTG 960
Query 541 TACTTGGCTGCGCCTTCTTTTGCGGTGGGCTAGTCTTTTACCAAAAAGACCAAGTATTTG 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 961 TACTTGGCTGCGCCTTCTTTTGTGGTGGGCTAGTCTTTTACCAAAAAGACCAAGTCTTTG 1020
Query 601 ACAAAGGAATTGCAACTGTGAATTCAGGATTGCTTTTGATGGCTGTCATGGGGATACTCT 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACAAAGGAATTGCTACTGTGAATTCAGGATTGCTTTTGATGGCTGTCATGGGGATACTCT 1080
Query 661 TCCCGGCTGTTCTTCATTACACCCATAGTGAGGTTCATGCCGGATCATCAGAGCTAGCCC 720
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1081 TCCCGGCTGTTCTTCACTACACCCATAGCGAGGTTCATGCTGGATCATCAGAGCTAGCCC 1140
Query 721 TGTCAAGGTTCAGCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 TGTCAAGGTTCAGCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGT 1200
Query 781 TAAAGAGCCAATCTAATTCTTATAGCCCTCTTGATGAGGAATCAAATCAGAACGAAGAAA 840
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1201 TAAAGAGCCAATCTAATTCTTATAGCCCTCTCGATGAGGAATCAAATCAGAACGAAGAAA 1260
Query 841 CTTCTGCCGAAGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 CTTCTGCCGAAGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAA 1320
Query 901 TATTGACTGCTTGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 TATTGACTGCTTGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCT 1380
Query 961 CAGTCTCATGGAACATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGA 1020
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 CAGTCTCATGGAATATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGA 1440
Query 1021 ACGCAGCTGAACATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 ACGCAGCTGAACATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTT 1500
Query 1081 TGGGAGTGGCTATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGTGTGG 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1501 TGGGAGTGGCTATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGCGTGG 1560
Query 1141 TGATTGGATGGATGATGGGTCAACAGATGGACCTTAACTTCCAGCTTTTTGAGACGGCGA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 TGATTGGATGGATGATGGGTCAACAGATGGACCTTAACTTCCAGCTTTTTGAGACGGCGA 1620
Query 1201 TGCTGTTCATCACCGTTATAGTAGTAGCtttttttCTCCAGGAAGGGTCATCAAATTACT 1260
||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1621 TGCTGTTCATCACTGTTATAGTAGTAGCATTTTTTCTCCAGGAAGGGTCATCGAATTACT 1680
Query 1261 TCAAAGGATTGATGCTCATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTACACG 1320
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 TCAAAGGATTGATGCTGATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTACACG 1740
Query 1321 AAGATCCTCATCAAGATGGTATATAAACCCGAGGAAGAGTCTGGTG 1366
|||||||||| |||||||||||||||||| || |||||||||||||
Sbjct 1741 AAGATCCTCACCAAGATGGTATATAAACCGGAAGAAGAGTCTGGTG 1786
> AT1G55730.1 | Symbols: ATCAX5, CAX5 | cation exchanger 5 | chr1:20831052-20834519
REVERSE LENGTH=1933
Length=1933
Score = 1376 bits (745), Expect = 0.0
Identities = 1149/1347 (85%), Gaps = 16/1347 (1%)
Strand=Plus/Plus
Query 9 TAGCACAAGGGTATGAGTTGTTGTAAAGTGCCAGTTCTTATTGAAGCACAAGTTGAAATG 68
||||||||| |||| |||||||||||||||||| ||||||| | || || || ||||||
Sbjct 261 TAGCACAAGTCTATGGGTTGTTGTAAAGTGCCAGCTCTTATTCAGGCCCAGGTAGAAATG 320
Query 69 GTGTCGGCTAATGAACTTGAGAACAAAAGCCTATTTAGACAAGAAGA-AGATGCCGCACA 127
| || || |||||| ||||| |||||||||| ||||||| || | | ||| || || |
Sbjct 321 GGGTTGGTTAATGATGTTGAGCACAAAAGCCTTTTTAGACGAG-ATACTGATTCCCCAGA 379
Query 128 AACTAAAGAAGCTTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTTCCCCAACACAC 187
|| |||| |||||| || ||||| ||||||||||||||| ||||||||| || | |
Sbjct 380 AAGAAAAGCAGCTTCCTTGATGGAACAAGGATCACTTTCTGCAAGTTTTCGAGAATGCTC 439
Query 188 GCCTAAAGCACCAAAGAATAGCGTACTTAATAGCATAAAGATCGTGATTTT-TTGTAATA 246
||||| |||| || || || || || | ||| | ||||| |||||||| | | ||||
Sbjct 440 AACTAAAACACCTAATAACAGTGTGCTCCAGAGCTTCAAGATTGTGATTTTATCG-AATA 498
Query 247 AACTCAATCTACTATTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGATAGATA 306
|||| ||||| | || ||||| |||||||| || ||| | |||| ||| ||| |||||
Sbjct 499 AACTTAATCTTTTGTTGCCTTTTGGTCCTCTGGCAATACTACTCCATTACTTGACAGATA 558
Query 307 GTAAGGGGTGGGTGTTCTTGCTGACCTTAGTAGGCATTACACCATTGGCTGAACGTCTAG 366
|||||| ||| | ||||| ||| |||||||||||| |||||||| ||||||||||| |
Sbjct 559 ATAAGGGATGGATCTTCTTATTGAGCTTAGTAGGCATCACACCATTAGCTGAACGTCTCG 618
Query 367 GATATGCCACAGAGCAACTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCCTAAATG 426
|||||||||| |||||| | ||||||||||| ||| ||||||||||||| |||||||| |
Sbjct 619 GATATGCCACCGAGCAATTAGCTTGTTACACTGGTTCAACTGTTGGAGGTCTCCTAAACG 678
Query 427 CTACATTCGGGAATGTGACAGAGCTGATCATATCAATTTTCGCT-TTGAAAAATGGAATG 485
||||||| || || |||||||||||||||||||| ||||||||| || |||| |||||||
Sbjct 679 CTACATTTGGAAACGTGACAGAGCTGATCATATCGATTTTCGCTCTT-AAAAGTGGAATG 737
Query 486 ATACGTGTTGTTCAGCTGACGTTACTAGGCTCGATTCTGTCTAACATGTTGCTTGTACTT 545
||||||||||| |||||||| || || |||||||| || ||||||||||| |||||||||
Sbjct 738 ATACGTGTTGTACAGCTGACATTGCTCGGCTCGATACTTTCTAACATGTTACTTGTACTT 797
Query 546 GGCTGCGCCTTCTTTTGCGGTGGGCTAGTCTTTTACCAAAAAGACCAAGTATTTGACAAA 605
||||||||||||||||| || ||||| || |||| ||| ||||| ||||| |||||||||
Sbjct 798 GGCTGCGCCTTCTTTTGTGGCGGGCTTGTATTTTCCCAGAAAGAGCAAGTCTTTGACAAA 857
Query 606 GG-AATTGCAACTGTGAATTCAGGATTGCTTTTGATGGCTGTCATGGGGA-TACTCTTCC 663
|| || ||| ||||||||| ||||||||||||||||||||||| |||| |||||||||
Sbjct 858 GGTAA-TGCTGTTGTGAATTCGGGATTGCTTTTGATGGCTGTCAT-GGGACTACTCTTCC 915
Query 664 CGGCTGTTCTTCATTACACCCATAGTGAGGTTCATGCCGGATCATCAGAGCTAGCCCTGT 723
| || |||||||||||||| || |||||||||||||| || ||||||||||| || || |
Sbjct 916 CCGCAGTTCTTCATTACACGCACAGTGAGGTTCATGCTGGGTCATCAGAGCTTGCTCTCT 975
Query 724 CAAGGTTCAGCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGTTAA 783
|||| |||||||||||||||||||| | || ||||||||||||||||| ||||||||||
Sbjct 976 CAAGATTCAGCAGTTGCATAATGCTCGTTGCCTATGCTGCTTACCTCTTTTTCCAGTTAA 1035
Query 784 AGAGCCAATCTAATTCTTATAGCCCTCTTGA-TGAGGAATCAAATCAGAACGAAGAAACT 842
||||||| | | ||||||| ||||| | | |||||| | || |||||||||||||||
Sbjct 1036 AGAGCCAGCCGAGCTCTTATACCCCTC-TCACCGAGGAAACTAACCAGAACGAAGAAACT 1094
Query 843 TCTGCCGAAGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAATA 902
|| | ||| ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1095 TCAGACGATGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATTATCTGGCTTTCAATC 1154
Query 903 TTGACTGCTTGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCTCA 962
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1155 TTGACGGCTTGGGTCTCTCTTCTTTCCGGCTATCTTGTTGATGCCATAGAGGGTGCTTCA 1214
Query 963 GTCTCATGGAACATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGAAC 1022
||||||||||| |||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct 1215 GTCTCATGGAAGATACCAATCTCTTTTATCAGTGTCATCTTACTTCCTATAGTTGGGAAT 1274
Query 1023 GCAGCTGAACATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTG 1082
|| || || |||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1275 GCGGCCGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTG 1334
Query 1083 GGAGTGGCTATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGTGTGGTG 1142
|||||||||||||| ||||| || |||||||| ||||| ||||| || || || |||||
Sbjct 1335 GGAGTGGCTATTGGATCCTCCATTCAGATTTCTATGTTCGCGGTTCCTTTTTGCGTGGTT 1394
Query 1143 ATTGGATGGATGATGGGT-CAACAGATGGACCTTAACTTCCAGCTTTTTGAGACGGCGA- 1200
|| ||||||||||||||| | || |||||||| || |||||||| ||||||||||| |
Sbjct 1395 ATCGGATGGATGATGGGTGCC-CAAATGGACCTAAATTTCCAGCTATTTGAGACGGCTAC 1453
Query 1201 TGCTGTTCATCACCGTTATAGTAGTAGCtttttttCTCCAGGAAGGGTCATCAAATTACT 1260
| |||||||| || ||||| || |||||||| |||||||||||||| |||| |||||||
Sbjct 1454 T-CTGTTCATAACTGTTATTGTTGTAGCTTTCTTTCTCCAGGAAGGAACATCGAATTACT 1512
Query 1261 TCAAAGGATTGATGCTCATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTACACG 1320
||||||||||||||||||||||||| ||||||||||| || || ||||||||||||||||
Sbjct 1513 TCAAAGGATTGATGCTCATTCTTTGCTATTTGATAGTCGCCGCTAGTTTCTTTGTACACG 1572
Query 1321 AAGATCCTCATCAAGATGGTATATAAA 1347
|||||||||||||||||| ||||||||
Sbjct 1573 AAGATCCTCATCAAGATGATATATAAA 1599
> AT1G55720.1 | Symbols: ATCAX6, CAX6 | cation exchanger 6 | chr1:20828118-20830640
REVERSE LENGTH=1449
Length=1449
Score = 1112 bits (602), Expect = 0.0
Identities = 1104/1339 (82%), Gaps = 64/1339 (5%)
Strand=Plus/Plus
Query 20 TATGAGTTGTTGTAAAGTGCCAG-TTCTTATTG-AAGCACAA-GTTGAAATGGTGTC-GG 75
||| || || ||||| ||||||| || ||| || | || || || ||||||| | | |
Sbjct 90 TATAAGGTGGTGTAAGGTGCCAGCTT-TTA-TGCAGGC-GAAGGTAGAAATGG-GGCTTG 145
Query 76 CTAATGAACTTGAGAACAAAAGCCTATTTAG-ACAAGAAGA-AGATGCCGCACAAACTAA 133
||||||| ||||| |||||||| ||| | ||||||| | |||| || ||||||| ||
Sbjct 146 TTAATGAAGTTGAGCTTAAAAGCCT-TTTGGAACAAGAA-ACAGATTCCCCACAAAC-AA 202
Query 134 A-GAAGCTTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTTCCCCAACACACGCCTA 192
| | ||||||||| |||||||||||||||| ||| | || | || | | |||
Sbjct 203 ATGCAGCTTCTTTGATGGAGCAAGGATCAC-TTCGAGAA--------C-GCAGA-G-CTA 250
Query 193 AAGCACCAAAGAATAGCGTACTTAATAGCATAAAGATCGTGATTTT-TTGTAATAAACTC 251
|||| || | ||| || || | | ||| | |||||||| ||||| | | ||||||||
Sbjct 251 AAGCGCCTAGGAACAGTGTGGTCCAGAGCTTCAAGATCGTCATTTTATCG-AATAAACTA 309
Query 252 AATCTACTATTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGATAGATAGTAAG 311
||||| | || ||||||||||||||||| ||| | ||||||||| ||| ||||| ||||
Sbjct 310 AATCTTTTGTTGCCTTTCGGTCCTCTAGCAATACTAGTCCACTACTTGACAGATAATAAG 369
Query 312 GGGTGGGTGTTCTTGCTGACCTTAGTAGGCATTACACCATTGGCTGAACGTCTAGGATAT 371
|||||| | ||||| || | ||||||||| || |||||||| ||||||||||| ||||||
Sbjct 370 GGGTGGTTCTTCTTACTAAGCTTAGTAGGTATCACACCATTAGCTGAACGTCTCGGATAT 429
Query 372 GCCACAGAGCAACTGGCTTGTTACACGGGTC-CAACTGTTGGAGGCCTCCTAAATGCTAC 430
|||||||||||| || |||| ||||| || | ||||||||||||| ||||| ||||||||
Sbjct 430 GCCACAGAGCAATTGTCTTGCTACACAGG-CGCAACTGTTGGAGGTCTCCTCAATGCTAC 488
Query 431 ATTCGGGAATGTGACAGAGCTGATCATATCAATTTTCGCT-TTGAAAAATGGAATGATAC 489
||| || || |||| |||||||||||||| ||| ||||| || ||||||||||||||||
Sbjct 489 ATTTGGAAACGTGATTGAGCTGATCATATCGATTATCGCTCTT-AAAAATGGAATGATAC 547
Query 490 GTGTTGTTCAGCTGACGTTACTAGGCTCGATTCTGTCTAACATGTTGCTTGTACTTGGCT 549
| ||||| ||| ||||| | || ||||||||||| |||||||| ||||||||||||||||
Sbjct 548 GCGTTGTACAGTTGACGCTGCTTGGCTCGATTCTTTCTAACATTTTGCTTGTACTTGGCT 607
Query 550 GCGCCTTCTTT-TGCGGTGGGCTAGTCTTTTACC-AAAAAGACCAAGTATTTGAC-AAAG 606
||| ||| ||| || || || || || ||| || ||||| ||||| |||||| ||||
Sbjct 608 GCG-CTTTTTTCTGTGGCGGCCTTGT-GTTTCCCGGGAAAGATCAAGTCTTTGACAAAAG 665
Query 607 GAATTGCAACTGTGAATTCAGG-ATTGCTTTTGATGGCTGTCATGGGGA-TACTCTTCCC 664
||| |||| ||||| ||| || | ||||||| ||||| ||||| |||| ||||||||||
Sbjct 666 GAA-TGCAGTTGTGAGTTCGGGCA-TGCTTTTAATGGCAGTCAT-GGGACTACTCTTCCC 722
Query 665 GGC-TGTTCTTCATTACACCCATAGTGAGGTTCATGCCGGATCATCAGAGCTAGCCCTGT 723
| | ||||||||||||| || || ||||||||||| |||||||||||||| || ||||
Sbjct 723 CACAT-TTCTTCATTACACGCACAGCGAGGTTCATGCTGGATCATCAGAGCTTGCTCTGT 781
Query 724 CAAGGTTCAGCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGTTAA 783
| || || | |||||| |||||||| | || ||||| ||||| ||||| ||||||||||
Sbjct 782 CGAGATTTATCAGTTGTATAATGCTCGTTGCCTATGCAGCTTATCTCTTTTTCCAGTTAA 841
Query 784 AGAGCCAATCTAA-TTCTTATAGCCCTCTTGATGAGGAATCAAATCAGAACGAAGAAACT 842
|||||| | | || || ||||| | | || || || | || |||||||||||||||
Sbjct 842 AGAGCC-AGCCAAGTTTTTATA---C-C--GA-GA--AAACTAACCAGAACGAAGAAACT 891
Query 843 TCTGCCGAAGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAATA 902
|| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 892 TCAAACGATGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATCTGGCTTTCAATC 951
Query 903 TTGACTGCTTGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCTCA 962
|| || |||||||||||||||||||| ||||||||||| ||||||||||||||| | ||
Sbjct 952 TTTACGGCTTGGGTCTCTCTTCTTTCGGGCTATCTTGTCGATGCCATAGAGGGTACTTCG 1011
Query 963 GTCTCATGGAACATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGAAC 1022
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1012 GTCTCATGGAAGATACCAATCTCTTTTATCAGTGTCATCTTGCTTCCTATAGTTGGGAAT 1071
Query 1023 GCAGCTGAACATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTG 1082
|| ||||| |||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct 1072 GCGGCTGAGCATGCAGGTGCGATTATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTG 1131
Query 1083 GGAGTGGCTATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGTGTGGTG 1142
|||||||||||||| ||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct 1132 GGAGTGGCTATTGGATCCTCCATTCAGATTTCTATGTTCGCGGTTCCTTTTTGTGTGGTG 1191
Query 1143 ATTGGATGGATGATGGGT-CAACAGATGGACCTTAA-CTTCCAGCTTTTTGAGACGGCGA 1200
|| ||||||||||||||| || || ||||| || || || |||||| ||||||||||| |
Sbjct 1192 ATCGGATGGATGATGGGTGCA-CAAATGGATCTAAATCT-CCAGCTATTTGAGACGGCTA 1249
Query 1201 -TGCTGTTCATCACCGTTATAGTAGTAGCtttttttCTCCAG---GAAGGGTCATCAAAT 1256
| ||| |||| || ||||| || |||||||| ||||||||| |||||| |||| |||
Sbjct 1250 CT-CTGCTCATAACTGTTATTGTTGTAGCTTTCTTTCTCCAGTTAGAAGGGACATCGAAT 1308
Query 1257 TACTTCAAAGGATTGATGCTCATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTA 1316
||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct 1309 TACTTCAAAAGATTGATGCTCATTCTTTGCTATTTGATAGTCGCTGCTAGTTTCTTTGTA 1368
Query 1317 CACGAAGATCCTCATCAAG 1335
|||||||||||||||||||
Sbjct 1369 CACGAAGATCCTCATCAAG 1387
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67268730300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5