BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg929216

Length=236
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G25400.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: NTP Pyrop...   156    1e-37


> AT3G25400.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase 
MazG-related, RS21-C6 (InterPro:IPR011394), 
EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative 
catalytic core (InterPro:IPR004518); Has 1123 Blast 
hits to 1121 proteins in 452 species: Archae - 22; Bacteria 
- 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other 
Eukaryotes - 181 (source: NCBI BLink). | chr3:9213156-9214281 
FORWARD LENGTH=643
Length=643

 Score =  156 bits (84),  Expect = 1e-37
 Identities = 92/96 (96%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  141  GGTGGGTGAAGTGGGAGAGCTATCAGAGATATTCCAATGGAAAGGAGAAGTGGCAAGAGG  200
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  215  GGTGGGTGAAGTGGGAGAGCTATCAGAGATATTCCAATGGAAAGGAGAAGTAGCAAGAGG  274

Query  201  ATGTCCAGATTGGTAAGAAGAAGAGAAATTGCATCT  236
            ||||||||||||| |||||||||||||| | |||||
Sbjct  275  ATGTCCAGATTGGAAAGAAGAAGAGAAAGTCCATCT  310



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10656762788


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5