BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929222
Length=1483
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14370.1 | Symbols: WAG2 | Protein kinase superfamily protei... 2340 0.0
AT1G53700.1 | Symbols: WAG1, PK3AT | WAG 1 | chr1:20048586-2005... 767 0.0
> AT3G14370.1 | Symbols: WAG2 | Protein kinase superfamily protein
| chr3:4797845-4799504 REVERSE LENGTH=1660
Length=1660
Score = 2340 bits (1267), Expect = 0.0
Identities = 1412/1484 (95%), Gaps = 1/1484 (0%)
Strand=Plus/Plus
Query 1 AGTGAATCAAGaaa-aaaaaaaTGGAACAAGAAGATTTCTATTTCCCTGACACCGATCTT 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16 AGTGAATCAAGAAAGAAAAAAATGGAACAAGAAGATTTCTATTTCCCTGACACCGATCTT 75
Query 60 GATCTCAGCTTCACATCCACCACCACCGACCGTACATTCACCTCCTCGAGCGCTCGCACA 119
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 76 GATCTCAGCTTCACATCCACCACTACCGACCGTACATTCGCCTCCTCGAGCGCTCGCACA 135
Query 120 AGTCTAACATTAAGCTTCAACGACAGACTCTCCACTTCCTCCGCCGTAACAACCTCCTCC 179
|||||||||||||||||||||||||||||||| |||||||| || || |||||||| |||
Sbjct 136 AGTCTAACATTAAGCTTCAACGACAGACTCTCTACTTCCTCTGCAGTCACAACCTCATCC 195
Query 180 ACCTCCTCTTCCACCGTCAACCACCGTCGTCATGATCCTCACTGGTCAGCAATCAAATCA 239
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 ACCTCCTCCTCCTCCGTCAACCACCGTCGTCATGATCCTCACTGGTCAGCAATCAAATCA 255
Query 240 GCAAAACTTATCTCCTCCGATGGAAACATCCACCTCCGTCACCTGAAACTTATACGCCAC 299
||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 256 GCAAAACTTCTCTCCTCCGACGGAAACATCCACCTCCGCCACCTGAAACTTATACGCCAC 315
Query 300 CTCGGCACAGGAAACCTAGGCCGAGTCTTCCTCTGTAACCTCCGTGACTCCTCCGCAAGA 359
|||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 316 CTCGGCACCGGAAACCTAGGCCGAGTGTTCCTCTGTAACCTCCGTGACTCTTCCGCAAGA 375
Query 360 TTCGCCCTAAAGGTCATTGACCGTAACTGTCTCACGACGGAGAAGAAGCTCTCTCAGGTC 419
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 376 TTCGCTTTAAAGGTCATCGACCGTAACTGTCTCACGACGGAGAAGAAGCTCTCTCAGGTC 435
Query 420 GAGACGGAGGCAGAGATCCTCTCCTTGCTAGACCATCCTTTCCTCCCTACGCTCTACGCT 479
||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| |||
Sbjct 436 GAGACGGAGGCAGAGATCCTCTCCTTGCTGGACCACCCTTTTCTTCCTACGCTCTATGCT 495
Query 480 CGTATCGACGAGTCTCACTACACGTGTCTCCTCATTGATTATGCACCAAACGGAGACTTA 539
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct 496 CGTATCGACGAGTCTCACTACACGTGTCTCCTCATTGATTATGCTCCCAATGGAGACTTA 555
Query 540 CATTCCTTGTTACGCAAGCAACCTGGTAACCGTTTACCGATTCAGCCGGTTAGATTCTTC 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 CATTCCTTGTTACGCAAGCAACCTGGTAACCGTTTACCGATTCAGCCGGTTAGATTCTTT 615
Query 600 GCCGCCGAAGTTCTCGTCGCATTAGAGTACCTTCACGCAATGGGAATCGTATACCGCGAT 659
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 GCCGCCGAAGTTCTCGTTGCATTAGAGTACCTTCACGCAATGGGAATCGTATACCGCGAT 675
Query 660 CTTAAACCTGAAAACGTTTTGCTTCGTGAAGACGGTCACGTCATGTTGTCGGATTTTGAT 719
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 676 CTTAAACCTGAAAACGTTTTGCTTCGTGAAGACGGACACGTCATGTTGTCGGATTTTGAT 735
Query 720 CTTTGTTTTAAATCCGACGTTGTCCCTACCTTTAAATCTCGTCGGTACCGGAGAACTTCT 779
|||||||| |||||||||||||||||||| |||||||||||||| ||||||||| |||||
Sbjct 736 CTTTGTTTCAAATCCGACGTTGTCCCTACTTTTAAATCTCGTCGCTACCGGAGATCTTCT 795
Query 780 TCGTCTCCGTCGCTTCGTAGGAGAAGGAGCGGTTGCTTCTCCGTTGCTGCGGAGAAAAAG 839
|| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct 796 TCATCTCCGTCGCTTCGTCGTAGAAGAAGCGGTTGCTTCTCCGTTGCTGCGGAGAAAAAG 855
Query 840 TACGAGAGAGAGGAGATCGTTTCGGAGTTTGCGGCAGAGCCTGTGACGGCGTTTTCAAGG 899
||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct 856 TACGAGAGAGAGGAGATTGTTTCAGAGTTTGCGGCAGAGCCTGTAACGGCGTTTTCAAGA 915
Query 900 TCTTGCGTCGGAACACATGAGTACCTTGCACCGGAGCTAGTCGCCGGCAACGGACACGGA 959
||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct 916 TCTTGTGTCGGAACACATGAGTATCTTGCGCCGGAGCTAGTTTCCGGCAACGGACACGGA 975
Query 960 AGCGGAGTAGACTGGTGGGCGTTTGGAATATTCCTTTACGAGTTGTTGTACGGTACGACG 1019
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 976 AGCGGAGTAGACTGGTGGGCGTTCGGAATATTCCTTTACGAGTTATTGTACGGTACGACG 1035
Query 1020 CCGTTTAAGGGAGAGAGTAAAGAGCAAACCCTGCGCAATATAGTATCGACCACTAAGTCC 1079
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||
Sbjct 1036 CCGTTTAAGGGAGAGAGTAAAGAGCAAACACTGCGGAATATAGTATCGACCACTAAGACC 1095
Query 1080 GCGAGTTTCCACGTGGACGTTGATTCAGAGGAAGCTAGGGATTTGATTGAGAAGCTTTTG 1139
||||||||||| |||||| ||||| ||| ||||||||||| ||||||||||||||||||
Sbjct 1096 GCGAGTTTCCATATGGACGGTGATTTAGATGAAGCTAGGGACTTGATTGAGAAGCTTTTG 1155
Query 1140 GTTAAGGACCCGAGGAAAAGGCTAGGATGCGCCAGGGGTGCGCAAGATATCAAACGTCAT 1199
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1156 GTTAAGGACCCAAGGAAAAGGCTAGGATGCGCCAGGGGTGCGCAAGATATCAAACGTCAT 1215
Query 1200 CCGTTTTTCGATGGAATCAAGTGGCCGTTGATTAGGCATTATAAGCCACCGGAAGAAGTT 1259
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 CCGTTTTTTGATGGAATCAAGTGGCCGTTGATTAGGCATTATAAGCCACCGGAAGAAGTT 1275
Query 1260 AGAGGTCTTGTGATAAAGAAGTCAACGAGATCACATGCTGGTCACGTGATTGCCGTTTCA 1319
|||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1276 AGAGGTCTTGTGATTAAGAAGTCAACGAGACCACATGCTAGTCACGTGATTGCCGTTTCA 1335
Query 1320 CCAAGACGGAGGAAGTCATTTTTGTGGAGGGCGTTGTCATATTTACTGCGCGGTAAAAAC 1379
|| ||||||| || || |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1336 CCGCGACGGAGAAAATCGTTTTTGTGGAGGGCGTTGTCATATTTACTGCGCGGTAAAAGC 1395
Query 1380 TCTAGTGGTGGGAGTAAAAATCAGAGCAATAGTAATTACTATCATTATGTGGGCAAAAGC 1439
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1396 TCTAGTGGTGGGAGTAAAAATCAGAGCAATAGTAATTATTATCACTATGTGGGCAAAAGC 1455
Query 1440 TACGCGAGTCGCAAACGCGTTTAAGGCTGTCTCACGCTTTCTTT 1483
|||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1456 TACGCGAGTCGCAAACGCGTTTAAGGCTGTCTCACGCTTTTTTT 1499
> AT1G53700.1 | Symbols: WAG1, PK3AT | WAG 1 | chr1:20048586-20050115
FORWARD LENGTH=1530
Length=1530
Score = 767 bits (415), Expect = 0.0
Identities = 1144/1481 (77%), Gaps = 110/1481 (7%)
Strand=Plus/Plus
Query 45 CCT-GACACCGATCTTGATCTCAGCTTCACATCCACCA-CCACCGACCGTACATTCACCT 102
||| ||||| ||||| |||||||||||||| |||| || |||||||||||||||||||||
Sbjct 39 CCTCGACACTGATCTCGATCTCAGCTTCACCTCCA-CAGCCACCGACCGTACATTCACCT 97
Query 103 C--C--TCG--AG--C--G-CTCGCA----CAAGTCTAACATTAAGCTTCAACGACAGAC 147
| | || || | | |||||| |||| ||||| |||||||||||||||||||
Sbjct 98 CATCAAGCGCTAGATCGAGTCTCGCACGCTCAAGCCTAACCTTAAGCTTCAACGACAGAC 157
Query 148 TCTCCACTTC--CTCCGCCGT-AACAACCTCCTCCACCTCCTCTTCCAC-CGTCAACCAC 203
|||| || | | | || | ||| ||| | ||| || | | | || | || |||||
Sbjct 158 TCTCAACCGCAACAACACCTTCAACCACCACTTCCTCCGCGGCAACAACAC-TCCACCAC 216
Query 204 CGTCGTCATGATCCTCACTGGTCAG-CAATCAAATCAGCAA-AACTTATCTCCTCCGATG 261
|||||| | |||||||||||| | | |||||| | | |||| ||| | |||||||||| |
Sbjct 217 CGTCGTTACGATCCTCACTGGAC-GTCAATCAGAGCCGCAACAAC-TCTCTCCTCCGACG 274
Query 262 GAA-ACATCCACCTCCGTCACCTGAAACTTATACGCCACCTCGGCACAGGAAACCTAGGC 320
||| || |||| ||||||||| | ||||| | || |||||||| |||||||| || |||
Sbjct 275 GAAGAC-TCCATCTCCGTCACTTTAAACTCGTCCGACACCTCGGTACAGGAAATCTCGGC 333
Query 321 CGAGTCTTCCTCTGTAACCTCCGTGACT--CCT---CC-GCAAGATTCGC-CCTAAAGGT 373
|| || ||||||||| |||||||||| | ||| || | ||||||| | |||| ||
Sbjct 334 CGTGTTTTCCTCTGTCACCTCCGTGATTGCCCTAACCCTACCGGATTCGCACTTAAA-GT 392
Query 374 CATTGACCGTAACTGTCTCACGACGGAGAAGAAGCTCTCTCAGGTCGAGACGGAGGCAGA 433
|| || ||| | ||| || |||| ||||||| | || || || || || || || ||
Sbjct 393 AATCGATCGTGA-TGT-TC-TTACGGCGAAGAAGATTTCACACGTGGAAACAGAAGCTGA 449
Query 434 GATCCTCTCCTTGCTAGACCATCCTTTCCTCCCTACGCTCTACGCTCGTATCGACGAGTC 493
||||||||||||||||||||| || ||| | ||||| |||||||| |||||||| | ||
Sbjct 450 GATCCTCTCCTTGCTAGACCACCCGTTCTTACCTACACTCTACGCACGTATCGATGCTTC 509
Query 494 TCACTACACGTGTCTCCTCATTGATTA-TGCACCAAACGGAGACTTACATTCCTTGTTAC 552
|||||| || || |||||||||||||| ||| || ||||| || |||||||||||| | |
Sbjct 510 TCACTATACTTGCCTCCTCATTGATTATTGC-CCTAACGGTGATTTACATTCCTTGCTCC 568
Query 553 GCAAGCAACCTGGTAACCGTTTACCGA-TTCAGCCGGTTAGATTCTTCGCCGCCGAAGTT 611
| || |||||| |||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct 569 GTAAACAACCTAATAACCGGTTACCGATTTC-CCCGGTTAGATTCTTCGCCGCCGAAGTA 627
Query 612 CTCGTCGCATTAGAGTACCTTCACGCAATGGGAATCGTATACCGCGATCTTAAACCTGAA 671
|||||||| || ||||| || ||||| | |||||||| || || ||||| ||||| ||
Sbjct 628 CTCGTCGCCTTGGAGTATCTCCACGCCCTTGGAATCGTTTATCGAGATCTCAAACCGGAG 687
Query 672 AACGTTTTGCTTCGTGAAGACGGTCACGTCATGTTGTCGGATTTTGATCTTTGTTTTAAA 731
|| | ||| |||||||||| || || ||||| | || ||||| ||||| ||||| |||
Sbjct 688 AATATCTTGATTCGTGAAGATGGACATATCATGCTCTCAGATTTCGATCTCTGTTTCAAA 747
Query 732 TCCGACGTTGTCCCTACCTTT-AAATCTCGTCGGTACCGGAGAACTTCTTCGTCTCC--- 787
|||| || || || | |||| |||||| || | |||||||||||| || |||||
Sbjct 748 GCCGATGTAGTTCC-AACTTTCCGATCTCGACGATTCCGGAGAACTTCGTCTTCTCCGAG 806
Query 788 GTCG-CTTCGTAGGAGAAG-GAGCGGTTGCTTCTCCGTTGCTGCGGAGAAAAAGTACGAG 845
| | | |||| | | | | ||||||| || | | | | ||||| | ||||||||
Sbjct 807 GAAGAC-TCGT-CGTG--GTG-GCGGTTG-TT-T-C--T-CCACGGAGGTAGAGTACGAG 855
Query 846 AGAGAGGAGATCGTTTCGGAGTTTGCGGCAGAGCCTGTGACGGCGTTTTC-AAGGTCTTG 904
||||| ||||| || |||| || ||||| ||||| |||||||||||||| || || ||
Sbjct 856 AGAGAAGAGATAGTAGCGGAATTCGCGGCGGAGCCAGTGACGGCGTTTTCGAA-ATCGTG 914
Query 905 CGTCGGAACACATGAGTACCTT-GCACCGGAGCTAGTCGCCGGCAACGGACACGGAAGCG 963
|| ||||| || ||||| || || ||||||||||||||||| ||||||||||||||||
Sbjct 915 TGTAGGAACTCACGAGTA-TTTAGCGCCGGAGCTAGTCGCCGGAAACGGACACGGAAGCG 973
Query 964 GAGTAGACTGGTGGGCGTTTGGAATATTCCTTTACGAGTTGTTGTACGGTACGACGCCGT 1023
| ||||| |||||||||||||| ||||| || ||||| |||| ||||| ||||||||||
Sbjct 974 GTGTAGATTGGTGGGCGTTTGGGATATTTCTATACGAAATGTTATACGGAACGACGCCGT 1033
Query 1024 TTAAGGGAGAG-AGTAAAGAGCAAACCCTGCGCAATATAGTATCGACCACTAAGTCCG-C 1081
|||| || | | | ||||| ||||||||||||||||||||||| | || | | ||
Sbjct 1034 TTAAAGGTG-GTACAAAAGAACAAACCCTGCGCAATATAGTATC-A-AACGATG-ACGTG 1089
Query 1082 GAGTTTCCACG-T---GGACGTTGAT-TCAGAGGAAGCTAGGGATTTGATTGAGAAGCTT 1136
| |||| ||| | ||| | | | | | ||||| | ||||||||| ||||| ||
Sbjct 1090 GCGTTT--ACGTTAGAGGAAGAAGGTAT-GGTTGAAGCCAAGGATTTGATAGAGAAACTG 1146
Query 1137 TTGGTTAAGGACCCGAGGAAAAGGCTAGGATGCGCCAGGGGTGCGCAAGATATCAA-ACG 1195
|| || || || |||||||| ||||||||||||||||||||||||||||||||||| | |
Sbjct 1147 TTAGTGAAAGATCCGAGGAAGAGGCTAGGATGCGCCAGGGGTGCGCAAGATATCAAGAGG 1206
Query 1196 TCATCCGTTTTTCGATGGAATCAAGTGGCCGTTGATTAGGCATTATAAGCCACCGGAAGA 1255
||| ||||||||| |||||||||||||||||||| || | |||||||| ||||| ||
Sbjct 1207 -CATGAGTTTTTCGAAGGAATCAAGTGGCCGTTGATCAGAAACTATAAGCCGCCGGA-GA 1264
Query 1256 AGTTAGAGGTCTTGTGATA-AAGAAGTCAACGAGATCACATGCTGGTCACGTGATTGCCG 1314
|| | ||||| |||| | |||| | || | | |||||||||||||||||| ||| |
Sbjct 1265 --TTCGGGGTCTGGTGA-AGAAGACG--AA-G-G--CACATGCTGGTCACGTGACTGCTG 1315
Query 1315 -T-TT-CACCAAGACGGAGGAAGTCATTT-TTGTGGAGGGCGTTGTCATATTTACTGCGC 1370
| || | ||| |||||||| | | | |||||| ||||| | || ||||||||||
Sbjct 1316 CTGTTACGCCA---CGGAGGAA-TAAGTGGTTGTGGTGGGCGCTATCGCATTTACTGCGT 1371
Query 1371 GGTAAAAACTCT-AGT--G-GTGGGAGTAAAAATCAGAGCAATAGTAATTACTATCATTA 1426
|||||| || | || | || | ||||||| ||||||||||| |||||||||||||||
Sbjct 1372 AGTAAAAGCT-TGAGCAAGAGTAGCAGTAAAATTCAGAGCAATAATAATTACTATCATTA 1430
Query 1427 TGTGGGCAAAA-GCTA---CGCGAGTCGCAAACGCGTTTAA 1463
|||||| |||| |||| ||| ||||||||| ||||||||
Sbjct 1431 TGTGGGTAAAAAGCTATAACGCTAGTCGCAAAAGCGTTTAA 1471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73142194065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5