BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929309
Length=2122
Score E
Sequences producing significant alignments: (Bits) Value
AT3G15220.1 | Symbols: | Protein kinase superfamily protein | ... 3386 0.0
AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfam... 1716 0.0
> AT3G15220.1 | Symbols: | Protein kinase superfamily protein
| chr3:5126597-5132306 REVERSE LENGTH=2574
Length=2574
Score = 3386 bits (1833), Expect = 0.0
Identities = 2028/2123 (96%), Gaps = 9/2123 (0%)
Strand=Plus/Plus
Query 2 GTTTTTCCTTGTATGTGGAGATGGACGATGTTGCGGGTTTACAAGAGGCAGCTGGAGCCA 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GTTTTTCCTTGTATGTGGAGATGGACGATGTTGCGGGTTTACAAGAGGCAGCTGGAGCCA 239
Query 62 GATTTAGCCACATTGAGTTGATTGGAAGAGGTTCTTTTGGTGATGTCTATAAAGCGTTTG 121
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 240 GATTTAGCCAGATTGAGTTGATTGGAAGAGGCTCTTTTGGTGATGTCTATAAAGCGTTTG 299
Query 122 ATAAGGACCTCAATAAAGAAGTTGCCATTAAAGTAATCGACCTGGAAGAATCAGAAGATG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ATAAGGACCTCAATAAAGAAGTTGCCATTAAAGTAATCGACCTGGAAGAATCAGAAGATG 359
Query 182 AGATCGAAGATATTCAGAAGGAAATTTCAGTATTGTCACAATGCCGTTGCCCATATATCA 241
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 360 AGATCGAAGATATTCAGAAGGAAATTTCAGTATTGTCACAATGTCGTTGCCCATATATCA 419
Query 242 CCGAATACTATGGTTCTTACCTTCATCAGACCAAGTTGTGGATCATTATGGAATATATGG 301
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 420 CCGAATACTATGGTTCTTACCTTCATCAGACCAAGTTGTGGATCATCATGGAATATATGG 479
Query 302 CCGGTGGCTCTGTTGCTGATCTTCTTCAATCTAGTAATCCATTGGATGAAACATCAATCG 361
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 480 CCGGTGGCTCTGTTGCTGATCTTCTTCAATCTAATAATCCGTTGGATGAAACATCAATCG 539
Query 362 CTTGTATCACACGCGATCTGCTTC-TAGCTGTTGAATATCTGCATAATGAGGGAAAGATC 420
||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||
Sbjct 540 CTTGTATCACACGCGATTTGCTTCAT-GCTGTTGAATATCTGCATAATGAGGGAAAGATC 598
Query 421 CACAGAGACATCAAAGCTGCTAATATTTTGTTGACCGAGAATGGCGATGTTAAGGTGGCG 480
||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 599 CACAGAGACATTAAAGCTGCGAATATTTTGTTGAGCGAGAATGGCGATGTTAAGGTGGCG 658
Query 481 GACTTTGGTGTGTCTGCTCAGCTAACGCGGACAATATCAAGAAGGAAGACTTTTGTAGGA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GACTTTGGTGTGTCTGCTCAGCTAACGCGGACAATATCAAGAAGGAAGACTTTTGTAGGA 718
Query 541 ACCCCATTTTGGATGGCACCAGAAGTGATTCAGAACTCAGAAGGGTATAACGAGAAGGCA 600
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 719 ACCCCATTTTGGATGGCACCAGAAGTTATTCAGAACTCAGAAGGGTATAATGAGAAGGCA 778
Query 601 GATATTTGGTCGCTCGGAATAACAGTTATTGAGATGGCAAAAGGAGAACCTCCCCTAGCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GATATTTGGTCGCTCGGAATAACAGTTATTGAGATGGCAAAAGGAGAACCTCCCCTAGCT 838
Query 661 GACCTTCATCCCATGAGAGTGCTTTTTATCATTCCTCGAGAAAATCCACCTCAGTTAGAT 720
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 839 GACCTTCATCCCATGAGAGTGCTTTTTATCATTCCTCGAGAAACTCCACCACAGTTAGAT 898
Query 721 GAGCATTTTTCCCGTCCAGTAAAGGAGTTTGTTTCATTATGCTTGAAGAAGGTCCCTGCT 780
|||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 899 GAGCATTTTTCCCGTCAAGTAAAGGAGTTTGTTTCATTATGCCTGAAGAAGGCCCCTGCC 958
Query 781 GAGAGACCAAGTGCCAAAGAACTTATTAAACACAGATTTATTAAGAATGCTAGAAAAAGT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 959 GAGAGACCAAGTGCCAAAGAACTTATTAAACACAGATTTATTAAGAATGCTAGGAAAAGT 1018
Query 841 CCGAAACTTCTTGAGAGGATAAGAGAGCGGCCAAAGTACCAAGTAAAAGAAGATGAAGAG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 CCGAAACTTCTTGAGAGGATAAGAGAGCGGCCAAAGTACCAAGTAAAAGAAGATGAAGAG 1078
Query 901 ACTCCTAGGAATGGTCCCAAAGCTCCAGTTGACTCATCTGGTACTGTTAGGGTGGCTAGA 960
|||||||||||||| |||||||||||||||| |||||||||||||||||| | ||||||
Sbjct 1079 ACTCCTAGGAATGGGGCCAAAGCTCCAGTTGAATCATCTGGTACTGTTAGGATAGCTAGA 1138
Query 961 GATGAAAGAAGCCAAGGCACTCCTGGATCTAGCTACAGTTTTCAGGGGAATACCGTCAAA 1020
|||||||||||||||||| | ||||||| | || |||||||||||||||||||||||
Sbjct 1139 GATGAAAGAAGCCAAGGCGCGCCTGGAT--A--TA--GTTTTCAGGGGAATACCGTCAAA 1192
Query 1021 AATGCTGGATGGGACTTTAGCGTTGGGGGGTCACAGAGTATTGGAGCAGTTCGTGCTTTA 1080
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1193 AATGCTGGATGGGACTTTACCGTTGGGGGGTCACAGAGTATTGGAACAGTTCGTGCTTTA 1252
Query 1081 AAACCTCCTCAAGCAAGGGAGAGGCGCCACGAAGTTTCTTCTAATCAGATTTCGCAACGA 1140
||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||| ||
Sbjct 1253 AAACCTCCTCAAGCAAGGGAGAGGCGCCAAGAAGTTTCTCCTAATCGGATTTCGCAAAGA 1312
Query 1141 ACAACAAGAGCTAGTGGTAATCAGTGGTCATCTTCGACTGGTAGTACAATTTCTGAAGCC 1200
||||||||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||
Sbjct 1313 ACAACAAGACCTAGTGGTAATCAATGGTCATCTGCGACTGGGAGTACAATTTCTGAAGCT 1372
Query 1201 TCTGAAAGAGGTTTTGTAAGAAGACATCCTTTTCAGAATGATCACGAAGATGGCTTCCAC 1260
|||||| |||||||||| |||||||| |||||||||||||| || |||||||||||||||
Sbjct 1373 TCTGAAGGAGGTTTTGTCAGAAGACACCCTTTTCAGAATGACCATGAAGATGGCTTCCAC 1432
Query 1261 GAAGAAGACGATTCATCGCTCACTGGATCGGGAACTGTCGTCATAAGAGCCCCAAGAAGT 1320
||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||
Sbjct 1433 GAAGAGGACGATTCATCGCTCAGTGGATCGGGAACTGTTGTCATAAGAACCCCAAGAAGT 1492
Query 1321 TCTCAATCATCTTCAATATTCCGTGAACAAAGCTCTGTGTCTAGCGGCAGGTATGCACCT 1380
||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| ||
Sbjct 1493 TCTCAATCATCTTCAGTATTCCGTGAACCAAGCTCTGGGTCTAGCGGCAGGTATGCAGCT 1552
Query 1381 TTTGATGATGCTTCAGCAAGTGGAACTGTTGTTGTTCGTGGGCAGTACGATGACTCTGGA 1440
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1553 TTTGATGATGCTTCAGCAAGTGGAACTGTTGTTGTCCGTGGACAGTACGATGACTCTGGA 1612
Query 1441 TCACCTCGAACCCCAAAATCTAGACTAGGGATTCAAGAGAGAACTTCAAGTGCCTCCGAA 1500
|||||||||||||| |||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 1613 TCACCTCGAACCCCGAAATCTAGACTAGGGATTCAAGAGAGAACTTCGAGTGCATCAGAA 1672
Query 1501 GATAGCAACGTAAATCTCGCGGAGGCAAAGGCAGCACTTGACGCAGGTTTCAGAAAGGGA 1560
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1673 GATAGCAACGCAAATCTCGCGGAGGCAAAGGCAGCACTCGACGCAGGTTTCAGAAGGGGT 1732
Query 1561 AATGCTAGAGAAAGACTTGGAATGGGGAAGAACAATAATGATGGGAAGGTTCACCGGAGA 1620
|| ||||||||||||||||||||||| || ||||||||||||||||||||| || | |||
Sbjct 1733 AAGGCTAGAGAAAGACTTGGAATGGGAAATAACAATAATGATGGGAAGGTTAACAGAAGA 1792
Query 1621 AGGGACCAAACGGCAGATGATTCTGATTATTCAAGAAATTCCGGCGTTAAGTCTAGTAAA 1680
||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 1793 AGGGAGCAAATGGCAGATGATTCTGACTATTCAAGAAATTCCGGCGATAAGTCTAGTAAA 1852
Query 1681 CAAAAAGCACTTCCAAGGTCAGAACAAGTGAGTGATGAAGAAGATGACTCCATATGGGAA 1740
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1853 CAAAAAGTAGTTCCAAGGTCAGAACAAGTGAGTGATGAAGAAGATGACTCCATATGGGAA 1912
Query 1741 TCATTGCCTGCATCATTGTCAATATTGCTCATACCGTCCCTAAAAGAGGCTCTTGGTGAC 1800
||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||
Sbjct 1913 TCATTGCCTGCATCATTGTCAGTGTTGCTCATACCGTCCCTAAAAGAAGCTCTTGGTGAC 1972
Query 1801 GATTCAAAAGAATCTATTGGGCGTACAGTGTCGAGATCCCTAGTGATGATGGAACGTGAA 1860
||||| |||||||||| || ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1973 GATTCTAAAGAATCTACTGTGCGTACAGTGTCGAGATCCCTTGTGATGATGGAACGTGAA 2032
Query 1861 AAGCCTGGTTCTTGTGAAGCTTTTGTTGCCAAGCTGATTGAACTTTTGGGAAGTTCAAAA 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2033 AAGCCTGGTTCTTGTGAAGCTTTTGTTGCCAAGCTGATTGAACTTTTGGGAAGTTCAAAA 2092
Query 1921 GAAGCTTCGGTGAAAGAATTGCACGATATGGCGGTCCGTGTTTTTGCCAAGACCACACCC 1980
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2093 GAAGCTTCGGTGAAAGAATTGCACGATATGGCGGTCTGTGTTTTTGCCAAGACCACACCC 2152
Query 1981 AACGATGCAGAGAACAAAAGGAAACAAGCTAACAAGGAGTTTAGTTCCAACACAAACGTT 2040
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 2153 GACAATGCAGAGAACAAAATGAAACAAGCTAACAAGGAGTTTAGTTCCAACACAAATGTT 2212
Query 2041 AGCCCACTCGGCAGATTCTTACTCTCAAGATGGCTAGGCCAATCATCACGTGATCTTTAA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2213 AGCCCACTCGGCAGATTCTTACTCTCAAGATGGCTAGGCCAATCATCACGTGATCTTTAA 2272
Query 2101 TCTCCCACC-TGAGACAGCCTAC 2122
|| |||||| ||||||| |||||
Sbjct 2273 TCCCCCACCCTGAGACAACCTAC 2295
> AT1G53165.3 | Symbols: ATMAP4K ALPHA1 | Protein kinase superfamily
protein | chr1:19813804-19819564 FORWARD LENGTH=2619
Length=2619
Score = 1716 bits (929), Expect = 0.0
Identities = 1744/2125 (82%), Gaps = 105/2125 (5%)
Strand=Plus/Plus
Query 15 TGTGGAGATGGACGATGTTGCGGGTTTACAAGAGGCAGCTGGAGCCAGATTTAGCCACAT 74
|||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct 215 TGTGGAAATGGATGATGTTGCTGGTTTACAAGAGGCAGCTGGAACCAGATTTAGCCAGTT 274
Query 75 TGAGTTGATTGGAAGAGGTTCTTTTGGTGATGTCTATAAAGCGTTTGATAAGGACCTCAA 134
|||| | || |||||||| || |||||||||||||| ||||||||||||| ||| || ||
Sbjct 275 TGAGCTAATCGGAAGAGGATCGTTTGGTGATGTCTACAAAGCGTTTGATACGGAGCTTAA 334
Query 135 TAAAGAAGTTGCCATTAAAGTAATCGACCTGGAAGAATCAGAAGATGAGATCGAAGATAT 194
||||| |||||||||||||| || || ||||||||||||||||| ||||| ||||||||
Sbjct 335 CAAAGACGTTGCCATTAAAGTTATTGATCTGGAAGAATCAGAAGACGAGATTGAAGATAT 394
Query 195 TCAGAAGGAAATTTCAGTATTGTCACAATGCCGTTGCCCATATATCACCGAATACTATGG 254
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 395 ACAGAAGGAAATTTCAGTATTGTCACAATGCCGTTGCCCATATATTACCGAATACTATGG 454
Query 255 TTCTTACCTTCATCAGACCAAGTTGTGGATCATTATGGAATATATGGCCGGTGGCTCTGT 314
|||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct 455 TTCTTACCTTCACCAGACCAAGTTATGGATCATCATGGAATATATGGCTGGTGGCTCAGT 514
Query 315 TGCTGATCTTCTTCAATCTAGTAATCCATTGGATGAAACATCAATCGCTTGTATCACACG 374
|||||| ||||||||| | |||||||||||||||||| ||||| |||||||| || ||
Sbjct 515 TGCTGACCTTCTTCAACCGGGTAATCCATTGGATGAAATTTCAATTGCTTGTATTACGCG 574
Query 375 CGATCTGCTTC-TAGCTGTTGAATATCTGCATAATGAGGGAAAGATCCACAGAGACATCA 433
||| || |||| | |||||||||||||| ||| ||||||||| ||||||||||| || |
Sbjct 575 CGACCTACTTCAT-GCTGTTGAATATCTCCATGCTGAGGGAAAAATCCACAGAGATATTA 633
Query 434 AAGCTGCTAATATTTTGTTGACCGAGAATGGCGATGTTAAGGTGGCGGACTTTGGTGTGT 493
|||| || ||||||||||||| ||||| || ||||||||||| || ||||||||||| |
Sbjct 634 AAGCCGCCAATATTTTGTTGAGTGAGAACGGTGATGTTAAGGTTGCAGACTTTGGTGTTT 693
Query 494 CTGCTCAGCTAACGCGGACAATATCAAGAAGGAAGACTTTTGTAGGAACCCCATTTTGGA 553
|||| || |||| ||||| |||||||| | ||||| ||||||||||| ||||||||||
Sbjct 694 CTGCACAATTAACCCGGACTATATCAAGGCGAAAGACATTTGTAGGAACACCATTTTGGA 753
Query 554 TGGCACCAGAAGTGATTCAGAACTCAGAAGGGTATAACGAGAAGGCAGATATTTGGTCGC 613
||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||| |
Sbjct 754 TGGCACCAGAAGTGATTCAGAACTCCGAAGGTTATAATGAGAAGGCAGATATATGGTCTC 813
Query 614 TCGGAATAACAGTTATTGAGATGGCAAAAGGAGAACCTCCCCTAGCTGACCTTCATCCCA 673
| ||||||||| | || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct 814 TTGGAATAACAATGATAGAGATGGCAAAAGGAGAACCTCCCCTTGCTGACCTTCATCCTA 873
Query 674 TGAGAGTGCTTTTTATCATTCCTCGAGAAAATCCACCTCAGTTAGATGAGCATTTTTCCC 733
|||||||||||||||||||||| || |||| || ||||||||||||||||||||||| |
Sbjct 874 TGAGAGTGCTTTTTATCATTCCCCGGGAAAGCCCTCCTCAGTTAGATGAGCATTTTTCAC 933
Query 734 GTCCAGTAAAGGAGTTTGTTTCATTATGCTTGAAGAAGG-TCCCTGCTGAGAGACCAAGT 792
|||| | ||||| |||||||| || |||||||| |||| ||| ||||||||||||| |
Sbjct 934 GTCCTTTGAAGGAATTTGTTTCGTTCTGCTTGAAAAAGGCTCCG-GCTGAGAGACCAAAT 992
Query 793 GCCAAAGAACTTATTAAACACAGATTTATTAAGAATGCTAGAAAAAGTCCGAAACTTCTT 852
|||||||||||| | ||||| |||||||| ||||||||||| ||||| |||||||| |||
Sbjct 993 GCCAAAGAACTTCTCAAACATAGATTTATAAAGAATGCTAGGAAAAGCCCGAAACTACTT 1052
Query 853 GAGAGGATAAGAGAGCGGCCAAAGTACCAAGTAAAAGAAGATGAAGAGACTCCTAGGAAT 912
|| || ||||||||||||||||| |||||||||||||| || ||||||| ||| | ||
Sbjct 1053 GAAAGAATAAGAGAGCGGCCAAAATACCAAGTAAAAGAGGACGAAGAGATTCCAACAAAC 1112
Query 913 GGTCCCAAAGCTCCAGTTGACTCATCTGGTACTGTTAGGGTGGCTAGAGATGAAAGAAGC 972
||||| |||||||| | ||| |||||||| |||||||| ||||||| |||||| ||| ||
Sbjct 1113 GGTCCAAAAGCTCCGGCTGAATCATCTGGGACTGTTAGAGTGGCTAAAGATGAGAGAGGC 1172
Query 973 CAAGGCACTCCTGGATCTAGCT---ACA---G-TT---T---T-----CAGGGGAATACC 1014
|| || ||| ||||| |||| | | | | || | | |||| || ||
Sbjct 1173 CAGGGAACTTCTGGAACTAGGTTGGATAAATGGTTGGATAAATGTTTTCAGGTAAAAACT 1232
Query 1015 GTCAAAAATGCTGGATGGGACTTTAGCGTTGGGGGGTCACAGAGTATTGGAGCAGTTCGT 1074
|||| |||||| || |||||||||||| ||||||| || ||| || |||| | |||||
Sbjct 1233 GTCAGAAATGCGGGGTGGGACTTTAGCATTGGGGGTTCGCAGGGTGCTGGAACTGTTCGA 1292
Query 1075 GCTTTAAAACCTCCTCAAGCAAGGGAGAGGCGCCACGAAGTTTCTTCTAATCAGATTTCG 1134
|||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||| |||
Sbjct 1293 GCTTTAAAACCTCCACAAGCCAGGGAAAGGCGCCAAGAAGTTAATTCTAATCAGACTTCT 1352
Query 1135 CAACGAACAACAAGAGCTAGTGGTAATCAGTGGTCATCTTCGACTGGTAGTACAATTTCT 1194
||| |||| || || | ||||||| ||| | |||||| | |||| || | ||
Sbjct 1353 CAAAAAACATCACGAACCAGTGGTAGTCAATTGTCATCCACTTTTGGT-GTCC-----CT 1406
Query 1195 GAAGCCTCTGAAAGAGGTTTTG-TAAGAAGACATCCTTTTCAGAATGATCACGAAGATGG 1253
||| ||||||| |||||||| ||| |||| || ||| ||||||||| | | |
Sbjct 1407 GAAATCTCTGAAGGAGGTTTTAATAA-AAGAGATTCTTATCAGAATGA-CT--A---T-- 1457
Query 1254 CTTCCACGAAGAAGACGATTCATCGCTCACTGGATCGGGAACTGTCGTCATAAGAGCCCC 1313
| | |||||||| |||||| | | || || |||||||| ||||||||| | ||
Sbjct 1458 CA---A-GAAGAAGATGATTCAA-G-T----GGTTCTGGAACTGTTGTCATAAGATCGCC 1507
Query 1314 AAGAAGTTCTCAATCATCTTCAATATTCCGTGAACAAAGCTCTGTGTCTAGCGGCAGGTA 1373
||||| ||||| ||||||||||| || ||||| |||||||||| ||||| | ||||||
Sbjct 1508 GAGAAGCTCTCAGTCATCTTCAATGTTTCGTGATCAAAGCTCTGGGTCTA-C--CAGGTA 1564
Query 1374 TGCACCTTTTGATGATGCTTC-AGCAAGTGGAACTGTTGTTGTTCGTGGGCAGTACGATG 1432
| | |||||||||||||||| | |||||||||| |||||||| ||||||||| | ||||
Sbjct 1565 TACGTCTTTTGATGATGCTTCTA-CAAGTGGAACAGTTGTTGTCCGTGGGCAGAATGATG 1623
Query 1433 ACTCTGGATCACCTCGAACCCCAAAATCTAGACTAGGGATTCAAGAGAGAACTTCAAGTG 1492
| ||||||||||||||||| || | ||||||||||||| ||||||| |||| ||| ||||
Sbjct 1624 ATTCTGGATCACCTCGAACACCGAGATCTAGACTAGGGCTTCAAGAAAGAAGTTCCAGTG 1683
Query 1493 CCTCCGAAGATAGCAACGT-AAATCTCGCGGAGGCAAAGGCAGCACTTGACGCAGGTTTC 1551
|||| || ||||||| | | |||||| || |||||||| ||||||||| |||||||||
Sbjct 1684 CCTCAGAGGATAGCATC-TCAAATCTTGCAGAGGCAAAATTAGCACTTGAAGCAGGTTTC 1742
Query 1552 AGAA-AGGGAAATGCTAGAGAAAGACTTGG-AATGGGGAAGAACAATAATGATGGGAAGG 1609
|||| |||||| |||||| ||||||||||| |||||| ||| || || | | |||
Sbjct 1743 AGAAGAGGGAA-TGCTAGGGAAAGACTTGGTAATGGG-AAGGTTAACAAA-A-G--AAG- 1795
Query 1610 TTCACCGGAG-AAGGGACCAAACGGCAGATGATTCTGATTA-TTCAAGAAATTCCGGCGT 1667
| | || ||| | || | |||| |||||||||| || | |||||||| |||
Sbjct 1796 ---A--G-AGCAAG---C-AA-C---AGATAATTCTGATTACTTGA-GAAATTCCCGCGA 1840
Query 1668 TAAGTCT-AGTAAACAAAAAGCACTTCCAAG-G-TCAGAACAAGTGAGTGATGA--A-GA 1721
| | ||| | |||||||| | || | | | | | ||| |||||||||||||||| | ||
Sbjct 1841 TCATTCTGA-TAAACAAAGACCAGT-C-ATGAGATCACAACAAGTGAGTGATGATGAAGA 1897
Query 1722 AGATGACTCCATATGGGAATCATTGCCTGCATCATTGTCAATATTGCTCAT-ACCGTCCC 1780
||||||||||| || || ||||||| |||||||||||||| ||||||| || ||| ||||
Sbjct 1898 AGATGACTCCAAATTGGCATCATTGTCTGCATCATTGTCACTATTGCT-ATTACCATCCC 1956
Query 1781 TAAAAGAGGCTCTTGG---TGACGATTCAAAAG-AATCTATTGGGCGTACAGTGTCGAGA 1836
||||||||||| |||| |||||| ||||||| || ||||||| | || ||| ||||||
Sbjct 1957 TAAAAGAGGCTGTTGGGGGTGACGACTCAAAAGGAA-CTATTGGACATAGAGTTTCGAGA 2015
Query 1837 TCCCTAGTGATGATGGAACGTGAAAAGCCTGGTTCTTGTGAAGCTTTTGTTGCCAAGCTG 1896
||| |||| | |||||||| |||||||||||||||| |||||||||| ||||||| |||
Sbjct 2016 TCCTTAGTTAAAATGGAACGCGAAAAGCCTGGTTCTTCTGAAGCTTTTATTGCCAAACTG 2075
Query 1897 ATTGAACTTTTGGGAAGTTCAAAAGAAGCT-TCGGTGAAAGAATTGCACGATATGGCGGT 1955
|| |||| ||||||||| |||| |||| | || ||||||||| |||| || |||||| |
Sbjct 2076 ATCGAACAGTTGGGAAGTACAAAGGAAG-TGTCAGTGAAAGAAGTGCAAGACATGGCGAT 2134
Query 1956 CCGTGTTTTTGCCAAGACCAC-ACCCAACGATGCAGAGAACAAAAGGAAA-CAAGCTAAC 2013
|||||| || || ||||| | | | || ||||||||||||||||| ||| ||||||| |
Sbjct 2135 CCGTGTGTTCGCTAAGACAATGAAC-AATGATGCAGAGAACAAAAG-AAAGCAAGCTAGC 2192
Query 2014 AAGGAGTTTAGTTCCAACACAAACGTTAGCCCACTCGGCA-GATTCTTACTCTCAAGATG 2072
|| || |||||||| || ||||| |||| ||||| | || |||||||| ||||||||||
Sbjct 2193 AAAGAATTTAGTTCTAATGCAAACTTTAGTCCACTTG-CAAGATTCTTATTCTCAAGATG 2251
Query 2073 GCTAGGCCAATCATCACGTGATCTT 2097
|||||| ||| |||| |||||||||
Sbjct 2252 GCTAGGTCAAACATCGCGTGATCTT 2276
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105220342320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5