BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg929406

Length=463
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G23540.1 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   427    4e-119


> AT3G23540.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr3:8443445-8448070 FORWARD LENGTH=1921
Length=1921

 Score =  427 bits (231),  Expect = 4e-119
 Identities = 291/317 (92%), Gaps = 16/317 (5%)
 Strand=Plus/Plus

Query  95   AGAGCTGAGTATGACGCGGAACATGATCTCTTGGAAAAGGGAGTTTATGATGAGAGGTAG  154
            ||||||||||||||| |||||||||||||||||||||| | |||||||||||| ||||||
Sbjct  257  AGAGCTGAGTATGACCCGGAACATGATCTCTTGGAAAA-GAAGTTTATGATGAAAGGTAG  315

Query  155  ATGGTATCAGAGAAAGGATTT--A-G--------AG-A--GGAGATG-TCTCCAGTGTAG  199
            ||||||||||||||| |||||  | |        || |  ||||||| ||||||||||||
Sbjct  316  ATGGTATCAGAGAAAAGATTTAGAGGTTAAAAACAGTAGGGGAGATGTTCTCCAGTGTAG  375

Query  200  TCATTATATGCCAGTTGAACGCCCTGAAGGAAAGCCTTTACCATGTGTAATATACTGTCA  259
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct  376  TCATTATATGCCAGTTGAACGCCCTGAAGGAAAGCCTTTACCCTGTGTAATATACTGCCA  435

Query  260  CGGAAACAGTGGATGTAGAGCGGATGGTAGTGAAGCCGCAATTGTCTTGCTGCCTTCAAA  319
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct  436  CGGAAACAGTGGATGTAGAGCGGATGGTAGTGAAGCCGCAATTGTGTTGCTGCCTTCGAA  495

Query  320  CATCACAGTTTTCACCCTTGACTTTTCGGGATCGGGTCTCTCAGGCGGGGAATATGTCAC  379
            |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  496  CATCACAGTTTTTACCCTTGACTTTTCGGGATCGGGTCTCTCAGGCGGGGAACATGTCAC  555

Query  380  CTTAGGCTGGAACGAAA  396
            |||||||||||||||||
Sbjct  556  CTTAGGCTGGAACGAAA  572



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 22067541811


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5