BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929469
Length=937
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16420.1 | Symbols: PBP1, JAL30 | PYK10-binding protein 1 | ... 819 0.0
AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3... 785 0.0
AT3G16410.1 | Symbols: NSP4 | nitrile specifier protein 4 | chr... 525 3e-148
AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase... 56.5 4e-07
> AT3G16420.1 | Symbols: PBP1, JAL30 | PYK10-binding protein 1
| chr3:5579386-5580953 FORWARD LENGTH=1274
Length=1274
Score = 819 bits (443), Expect = 0.0
Identities = 781/941 (83%), Gaps = 36/941 (4%)
Strand=Plus/Plus
Query 15 AGAACGATGGCTCAAAAGGTGGAAGCACAAGGAGGGAAAGGAGGCAACCAATGGGACGAT 74
|||| |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 94 AGAA-GATGGCCCAAAAGGTGGAAGCACAAGGAGGGAAAGGAGCCAACCTATGGGACGAT 152
Query 75 GGATCCG-TACATGACGCTGTGACCAAGATTCAGGTCGGAGCAGG--TGGACTCGGCATT 131
|||| || ||||||||| ||||||||||||||| ||| |||||| | || ||| |||
Sbjct 153 GGAT-CGACACATGACGCCGTGACCAAGATTCAGCTCGCAGCAGGCATAGA--CGGAATT 209
Query 132 CAATACGTTCAGTTCGACTATGTCAAGAACGGACAAACTGAAGAAGCTCCTCTTCGCGGC 191
||||| |||||||| || |||||||||||||||||| | ||| ||||||||||||| ||
Sbjct 210 CAATATGTTCAGTTTGATTATGTCAAGAACGGACAACCCGAACAAGCTCCTCTTCGTGGT 269
Query 192 ATCAAAGGCCGTAG-TATCGCAGCTGATCCGTTTGTGATCAACCATCCAGAGGAACACT- 249
| |||||||||| | | || ||||||||||||||||||| ||||||||||| ||||| |
Sbjct 270 ACCAAAGGCCGT-GTTCTCCCAGCTGATCCGTTTGTGATTAACCATCCAGACGAACA-TC 327
Query 250 TGGTTTCTGTAGAAGGTTGGTATAACCCTGAAGGTGTTATTCAAGGGCTTAAGTTCAAAT 309
| |||||||||||||||||||||| |||||||||| | |||||||| ||||||||| |
Sbjct 328 TAGTTTCTGTAGAAGGTTGGTATAGCCCTGAAGGTATCATTCAAGGAATTAAGTTCATCT 387
Query 310 CGAACAAGAAAACTTCTGATGTCATTGGATACGACGATGGTACTCAATTCACTCTCCAAG 369
| |||||||| ||||||||||||||||||| ||| || |||||||| |||||||| ||||
Sbjct 388 CCAACAAGAAGACTTCTGATGTCATTGGATCCGATGAGGGTACTCACTTCACTCTACAAG 447
Query 370 TTCAAGACAAGAAGATCACTGGCTTTCATGGGTTTGCTGGAGACAATCTTAATTCTCTTG 429
|| ||||||||||||||| |||||||||||||| ||| || | |||||||||||||||||
Sbjct 448 TTAAAGACAAGAAGATCATTGGCTTTCATGGGTCTGCCGGGGGCAATCTTAATTCTCTTG 507
Query 430 GGGCTTACTTTGCTCCGTTGACTACTTCAGCCCCGTTGA-TCCCTGCCAAGAAGCTTCCA 488
|||||||||||||||||||||||||| || | ||||||| ||| ||||||| |||| |
Sbjct 508 GGGCTTACTTTGCTCCGTTGACTACTACAACTCCGTTGACTCC-TGCCAAGCAGCTAACG 566
Query 489 GCACTTGGTAGTGATGAAGGAACTGCATGGGACGATGGTGCTTATAATGGTGTTAAGAAG 548
||| ||||||||||||| ||||||| |||||| ||||||||||| ||| |||||||||
Sbjct 567 GCATTTGGTAGTGATGACGGAACTGTATGGGATGATGGTGCTTACGTTGGGGTTAAGAAG 626
Query 549 GTGCATATAGGTCAAGGACTCGATGGTGTGGCAGCGGTTAAGTTTGAGTATGTCAATGGT 608
||| | | || |||| | ||||| | |||| |||||||||| ||| | ||| |
Sbjct 627 GTGTACGTTGGACAAGCCCAAGATGGAATCTCAGCTGTTAAGTTTGTGTACGACAAAAGC 686
Query 609 TCTCAA-ATTGTTGTTGGAGATGAACGTGGAAAGACG-ACTCTACTCGGCTTCGAAGAGT 666
|| | | || ||||| |||| |||||||| | ||||||||||| ||||||||||
Sbjct 687 CCTGAGGAG-GTCACAGGAGAAGAACATGGAAAGA-GTACTCTACTCGGATTCGAAGAGT 744
Query 667 TCG-ACATTGATTATCCAAGTGAATACATCACGGCTGTGGATGGCACCTACGATAAAATA 725
||| || |||| |||||||||||||||||||| || || |||||||| || ||||||||
Sbjct 745 TCGTAC-TTGACTATCCAAGTGAATACATCACCGCAGTCGATGGCACTTATGATAAAATC 803
Query 726 TTTGGAAGTGACT--CTGCGGTCATTACCATGCTTAGGTTCAAGACTAATAAGCAAACAT 783
||||| ||||| | || | ||||| || ||||| ||||||||||||||||||||||| |
Sbjct 804 TTTGGGAGTGA-TGGCT-CAGTCATAACTATGCTCAGGTTCAAGACTAATAAGCAAACGT 861
Query 784 C-CAATCCCTTTGGTCTTGAAGCTGGCGTAGCCTTTGAACTTAAAGAGGAAGGCCACAAG 842
| | ||||||||| |||||||||||| || ||| ||||| ||||||||||||||||||
Sbjct 862 CTCC-TCCCTTTGGACTTGAAGCTGGCACAGTCTTCGAACTCAAAGAGGAAGGCCACAAG 920
Query 843 ATTGTCGGATTCCATGGAAAAGTC-AGTGATATTCTTCATCAAA-TTGGAGTCCATGTCC 900
|| || || |||||||||| || | | || | | || || |||| ||||||||||||| |
Sbjct 921 ATCGTTGGTTTCCATGGAAGAGCCGA-TGTTCTGCTCCA-CAAAATTGGAGTCCATGTTC 978
Query 901 -TCCCC-ATCACCAACTGATCATG-A-CATCTTTCTCTTTG 937
||| ||| | ||||||| ||| | | ||||| || |||
Sbjct 979 GTCCTTTATC-C-AACTGATGATGGAGC-TCTTTATCCTTG 1016
> AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3:5581663-5583187
FORWARD LENGTH=1205
Length=1205
Score = 785 bits (425), Expect = 0.0
Identities = 776/939 (83%), Gaps = 49/939 (5%)
Strand=Plus/Plus
Query 21 ATGGCTCAAAAGGTGGAAGCACAAGGAGGGAAAGGAGGCAACCAATGGGACGATGGATCC 80
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 87 ATGGCTCAAAAGGTTGAAGCAAAAGGAGGGAAAGGAGGCAACCAATGGGACGATGGATCC 146
Query 81 G-TACATGACGCTGTGACCAAGATTCAGGTCGGAGCAGGTGGACTCGGCATTCAATACGT 139
| | |||||||| ||||||||||||||||| | || ||| ||| | || ||||||||| |
Sbjct 147 GAT-CATGACGCCGTGACCAAGATTCAGGTTGCAGTAGGCGGAATGGGAATTCAATACAT 205
Query 140 TCAGTTCGACTATGTCAAGAACGGACAAACTGAAGAAGCTCCTCTTCGCGGCATCAAAGG 199
||||||||| || ||||||||||||||||| ||| || |||||||||| || ||||||||
Sbjct 206 TCAGTTCGATTACGTCAAGAACGGACAAACCGAACAAACTCCTCTTCGTGGTATCAAAGG 265
Query 200 CCGTAGTAT-CGCAGCTGATCCGTTTGTGATCAACCATCCAGAGGAACA-CTTGGTTTCT 257
| ||| || | || |||||||||||||||| |||||||| ||||| || || | |||||
Sbjct 266 CAGTACCATTC-CAACTGATCCGTTTGTGATTAACCATCCTGAGGAGCATCTAG-TTTCT 323
Query 258 GTAGAAGGTTGGTATAACCCTGAAGGTGTTATTCAAGGGCTTAAGTTCAAATCGAACAAG 317
| ||| ||||||||| ||||| ||| ||||||||||||||| ||||| ||| |||||
Sbjct 324 ATTGAAATTTGGTATAAACCTGATGGTCTTATTCAAGGGCTTAGGTTCATATCCAACAA- 382
Query 318 AAA-ACTTCT-GATGTCATTGGATACGA-CGATGGTACTCA-ATTCACT-CTCCAAGTTC 372
||| |||||| | | ||||||||||||| || ||||||| | || || | ||||||||||
Sbjct 383 AAAGACTTCTCGTT-TCATTGGATACGATCG-TGGTACT-AGAT-CATTTCTCCAAGTTC 438
Query 373 AAGACAAGAAGATCACTGGCTTTCATGGGTTTGCTGGAGACAATCTTAATTCTCTTGGGG 432
||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| |
Sbjct 439 AAGACAAGAAGATCATTGGCTTTCATGGGTCTGCCGGAGACAATCTTAATTCTCTTGGAG 498
Query 433 CTTACTTTGCTCCGTTGACTACTTCAGCCCCGTTGA-TCCCTGCCAAGAAGCTTCCAGCA 491
||||||||||||||||||||| | | || |||| ||| ||||||| ||| || |||
Sbjct 499 CTTACTTTGCTCCGTTGACTA-T-C--CCA--TTGACTCC-TGCCAAGCCGCTACCGGCA 551
Query 492 CTTGGTAGTGATGAAGGAACTGCATGGGACGATGGTGCTTATAATGGTGTTAAGAAGGTG 551
|||||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||||||
Sbjct 552 CTTGGTAGTGATGATGGAACAGCATGGGATGATGGTGCTTACGTTGGGGTTAAGAAGGTG 611
Query 552 CATATAGGTCAAGGACTCGATGGTGTGGCAGCGGTTAAGTTTG-AGTATGTCAATGGTTC 610
| |||| |||| | |||||| | | || |||||||||| | || | ||| | |
Sbjct 612 TACGTAGGACAAGCCCAAGATGGTATATCGGCTGTTAAGTTTGTA-TACGACAAAAGCCC 670
Query 611 TCAA-ATTGTTGTTGGAGATGAACGTGGAAAGACG-ACTCTACTCGGCTTCGAAGAGTTC 668
| | | || ||||| |||| |||||||| | ||||||||||| ||||||||||||
Sbjct 671 TGAGGAG-GTCACAGGAGAAGAACATGGAAAGA-GTACTCTACTCGGATTCGAAGAGTTC 728
Query 669 G-ACATTGATTATCCAAGTGAATACATCA-CGGCTGTGGATGGCACCTACGATAAAATAT 726
| || |||| ||||||||||||||||||| || | || || ||||||||||||||||| |
Sbjct 729 GTAC-TTGACTATCCAAGTGAATACATCATCG-CAGTCGAAGGCACCTACGATAAAATCT 786
Query 727 TTGGAAGTGACT--CTGCGGTCATTACCATGCTTAGGTTCAAGACTAATAAGCAAACATC 784
|||| ||||| | || | ||||| || ||||||||||||||||||||||||||||| ||
Sbjct 787 TTGGGAGTGA-TGGCT-CAGTCATAACTATGCTTAGGTTCAAGACTAATAAGCAAACGTC 844
Query 785 CAATCCCTTTGGTCTTGAAGCTGGCG-TAGCCTTTGAACTTAAAGAGGAAGGCCACAAGA 843
| ||||||||| |||||||||||| | ||||| ||||| ||||||||||||||||| |
Sbjct 845 CCCTCCCTTTGGACTTGAAGCTGGCACT-GCCTTCGAACTCAAAGAGGAAGGCCACAAAA 903
Query 844 TTGTCGGATTCCATGGAAAAGTC-AGTGATATT-CTTCATCAAA-TTGGAGTCCATGTCC 900
| || || |||||||||| || | | || | || || || |||| ||||||| |||||||
Sbjct 904 TCGTTGGCTTCCATGGAAGAGCCGA-TGCT-TTGCTCCA-CAAAATTGGAGTTCATGTCC 960
Query 901 -TCCCCATCACCAACTGATCATGAC-ATCTTTCTCTTTG 937
|||| | |||||||| ||||| |||||| ||||||
Sbjct 961 GTCCCGTTT-CCAACTGACCATGAAGATCTTTATCTTTG 998
> AT3G16410.1 | Symbols: NSP4 | nitrile specifier protein 4 | chr3:5571992-5574541
FORWARD LENGTH=2106
Length=2106
Score = 525 bits (284), Expect = 3e-148
Identities = 545/669 (81%), Gaps = 25/669 (4%)
Strand=Plus/Plus
Query 20 GATGGCTCAAAAGGTGGAAGCACAAGGAGGGAAA-GGAGGCAACCAATGGGACGATGGAT 78
|||||| |||||||| |||||||||||| ||||| || || ||||||||||| |||||||
Sbjct 64 GATGGCCCAAAAGGTTGAAGCACAAGGA-GGAAATGGCGGTAACCAATGGGATGATGGAT 122
Query 79 CCGTACATGACGCTGTGACCAAGATTCAGGTCGGAGCAGG-TGGACTCGGCATTCAATAC 137
||| | | |||||||||||||||||||| |||| |||||| ||| ||| ||| ||||
Sbjct 123 CCGAATACGACGCTGTGACCAAGATTCAAGTCGCAGCAGGCGGGA-ACGGAATTGAATAT 181
Query 138 GTTCAGTTCGAC-TATGTCAAGAACGGACAAACTGAAGAAGCTCCTCTTCGCGGCATCAA 196
||| ||||| || || ||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct 182 GTTAAGTTC-ACATACGTCAAGAACGGACAAACCGAAGAAGCCCCTCTACGCGGTGTCAA 240
Query 197 AGGCCGTAGTATCGCAGCTGATCCGTTTGTGATCAACCATCCAGAGGAACACTTGGTTTC 256
||||||||| ||| ||| |||||||||||||| |||||||| ||||| ||||| |||||
Sbjct 241 GGGCCGTAGTTTCGAAGCAGATCCGTTTGTGATAAACCATCCGGAGGAGCACTTAGTTTC 300
Query 257 TGTAGAAGGTTGGTATAACCCTGAAGGTGTTATTCAAGGGCTTAA-GTTCAAATCGAACA 315
|||||||||| |||||||||||||||| |||||| ||||| ||| ||||||||| ||||
Sbjct 301 TGTAGAAGGTCGGTATAACCCTGAAGGACTTATTCTAGGGC-TAACGTTCAAATCCAACA 359
Query 316 AGAAAACTTCTGATGTCATTGGATACGACGATGGTACTCAATTCACTCTCCAAGTTCAAG 375
|||| ||||||||| |||||||||| || |||||||| | |||||||||||||||||||
Sbjct 360 AGAAGACTTCTGATCTCATTGGATATGAAGATGGTACACCGTTCACTCTCCAAGTTCAAG 419
Query 376 ACAAGAAGATCACTGGCTTTCATGGGTTTGCTGGAGACAATCTTAATTCTCTTGGGGCTT 435
||||||||||| ||| ||| |||| || |||||| ||||||| |||||||||| || |
Sbjct 420 ACAAGAAGATCGTTGGATTTTATGGCTTCGCTGGAAACAATCTCCATTCTCTTGGAGCGT 479
Query 436 ACTTTGCTCCGTTGACTACT-TCAGCCCCGTTGATCCCTGCCAAGAAGCTTCCAGCACTT 494
|||||||||||||||||| | | | |||| |||| |||||| ||||| ||||
Sbjct 480 ACTTTGCTCCGTTGACTAATGTAACCCCC-TTGAA---TGCCAAAAAGCTAGAAGCAAAG 535
Query 495 GGTAGTGATGAAGG-A-ACTGCATGGGACGATGGTGCTTATAATGGTGTTAAGAA-GGTG 551
||| |||| | || | | | |||||| ||||||| ||| || ||||| ||| |||
Sbjct 536 GGTGGTGAC-ACGGGAGA-TATATGGGATGATGGTGTTTACGATAATGTTA-GAAAGGTA 592
Query 552 CATATAGGTCAAGGACTCGATGGTGTGGCAG-CGGTTAAGTTTGAGTATGTCAATGGTTC 610
|| |||| |||| | ||||| | || || | |||||||||||||||||||||||
Sbjct 593 TATGTAGGGCAAGCCCAATATGGTATAGCCTTCG-TCAAGTTTGAGTATGTCAATGGTTC 651
Query 611 TCAAATTGTTGTTGGAGATGAACGTGGAAAGACGACTCTA-CTCGGC-TTCGAAGAGTTC 668
|||| | |||||||||||||||| |||||||| ||| | || || || ||||||||
Sbjct 652 TCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAG-AGCTAGGAGTT-GAAGAGTTT 709
Query 669 GACATTGAT 677
|| ||||||
Sbjct 710 GAGATTGAT 718
> AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase-binding
protein-like protein-300B | chr3:5585944-5587750
FORWARD LENGTH=1179
Length=1179
Score = 56.5 bits (30), Expect = 4e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 20 GATGGCTCAAAAGGTGGAAGCACAAGGAGG 49
||||||||||||||||||||||||||||||
Sbjct 67 GATGGCTCAAAAGGTGGAAGCACAAGGAGG 96
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45813542064
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5