BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929630
Length=2348
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleot... 3901 0.0
AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gat... 1796 0.0
> AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleotide-binding
transporter 1 | chr3:6048916-6052552 FORWARD LENGTH=2556
Length=2556
Score = 3901 bits (2112), Expect = 0.0
Identities = 2272/2349 (97%), Gaps = 11/2349 (0%)
Strand=Plus/Plus
Query 1 GAAACCTTGATTTTGGTCAAGAAATGGCTTCCCACAACGAAAACGATGATATTCCCATGC 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 GAAACCGTGATTTTGGTCAAGAAATGGCTTCCCACAACGAAAACGATGATATTCCCATGC 195
Query 61 TTCCAATTTCAGACCCATCATCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTA 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 TTCCGATTTCAGACCCATCATCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTA 255
Query 121 GCGTTTCTCTCTCAAACCCTACTTCCTCCATTGAAGGATTTGACAATTCCACTGTGGTTT 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 256 GCGTTTCTCTCTCAAACCCTACTTCCTCCATTGAAGGATTTGACACTTCCACTGTGGTTT 315
Query 181 TAGGCTACACGGGTCCTCTTCGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 TAGGCTACACGGGTCCTCTTCGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTC 375
Query 241 CTCTTACCTCTACTCGCAAACCTGAACCTCTCTTTCTTCCTCATCCGTCTTCTGGTTCTT 300
||||||||||||||||||| | ||||||||||||||||||||| || | |||||
Sbjct 376 CTCTTACCTCTACTCGCAAGCATGAACCTCTCTTTCTTCCTCA----TC--C---TTCTT 426
Query 301 CTGATTCCGTTGGTGTCTCTTCTCAGCCTGAGAGGTATCCTTCTTTTGCTGCTCTTGAAC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 CTGATTCCGTTGGTGTCTCTTCTCAGCCTGAGAGGTATCCTTCTTTTGCTGCTCTTGAAC 486
Query 361 ATAAAAACTCCTCAGACGATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGAC 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 487 ATAAAAACTCCTCAGAGGATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGAC 546
Query 421 AATTAGGG-ATGTGTAATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCGTAAG 479
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 AATT-GGGAATGTGTAATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCGTAAG 605
Query 480 GCTGCTCAAATCCCTACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAATGCT 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 606 GCTGCTCAAATCCCTACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAACGCT 665
Query 540 CTGTATGATGATGCTAAAGGTTGGGCAAGGAGATTTGCTTCCTCTGTTAATAGATACTTA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 CTGTATGATGATGCTAAAGGTTGGGCAAGGAGATTTGCTTCCTCTGTTAATAGATACTTA 725
Query 600 CCTGGAATCATGAATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 CCTGGAATCATGAATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTT 785
Query 660 TCATGCTTGTTAGCTATTTTTATAGATCCTCTCTTCTTCTTCCTCATAAAAGTCCAAGAG 719
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 786 TCATGCTTGTTAGCTATTTTTATAGATCCCCTCTTCTTCTTCCTCATAAAAGTCCAAGAG 845
Query 720 CAAAACAAATGCATTATGATTGATTGGCCGATGACTAAAGCATTTGTAGCTGTTAGAAGT 779
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 846 CAAAACAAATGTATTATGATTGATTGGCCGATGACTAAAGCATTTGTAGCTGTAAGAAGT 905
Query 780 GTAACAGATGTTATATTCACTATGAACATTCTGCTTCAGTTCCGATTGGCCTACGTAGCT 839
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 906 GTAACAGATGTTATATTCACTATGAACATTCTACTTCAGTTCCGATTGGCCTATGTAGCT 965
Query 840 CGTGAGTCTACGGTAGTTGGTGCTGGCCAGTTAGTTAGTCATCCCaaaaaaaTTGCCCTT 899
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 966 CGTGAGTCTACGGTAGTTGGAGCTGGCCAGTTAGTTAGTCATCCCAAAAAAATTGCCCTT 1025
Query 900 CATTACTTTAGAGGAAAGTTTTTCCTTGACTTGTTCATAGTGATGCCACTTCCACAGATA 959
|||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 CATTACCTCAAAGGAAAGTTTTTCCTTGACTTGTTCATAGTGATGCCACTTCCACAGATA 1085
Query 960 TTGATTTTATGGATAATACCAGAACATTTGGGTGCATCCGGGGCAAACTATGCGAAAAAC 1019
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1086 TTGATACTATGGATAATACCAGCACATTTGGGTGCATCCGGGGCAAACTATGCGAAAAAC 1145
Query 1020 CTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTCTACCATTT 1079
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1146 CTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTCTACCGTTT 1205
Query 1080 CTTGCTGGACAAACACCGACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATT 1139
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1206 CTTGCTGGACAAACACCTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATT 1265
Query 1140 AATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGT 1199
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1266 AATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATTTGGT 1325
Query 1200 CTGCAGAGAGTTAATCAATGCCTTCGAAATGCTTGCGGTAATTTTGAGCGTGAATGTCAT 1259
||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 1326 CTGCAGAGAGTTAATCAGTGCCTTCGAAATGCTTGCGGTAATTTTGGGCGTGAATGTCAA 1385
Query 1260 GATCTTATAGATTGTGGTAATGGAATTAGCACTGTGTTAGTACGAGCTACCTGGAGAGAT 1319
||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||
Sbjct 1386 GATCTTATAGATTGTGGTAATGGAAATAGCAGTGTATTAGTACGAGCTACCTGGAAAGAT 1445
Query 1320 AATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAA 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 AATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAA 1505
Query 1380 GCAGTCAATCTAACCAATCATTCTAGTCTCTTCACAAGATACAGTTACTCTCTCTTCTGG 1439
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1506 GCAGTCAATCTTACCAATCATTCTAATCTCTTCACAAGATACAGTTACTCTCTCTTCTGG 1565
Query 1440 GGCTTCCAGCAAATCAGCACTCTTGCTGGAAACCAAGTCCCAAGCTACTTTCTAGGGGAG 1499
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1566 GGCTTCCAGCAAATCAGCACTCTTGCTGGCAACCAAGTCCCAAGCTACTTTCTAGGGGAG 1625
Query 1500 GTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTGCTTTTTGCGCTTCTTATTGGT 1559
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1626 GTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTACTTTTTGCGCTTCTTATTGGT 1685
Query 1560 AATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTAAGACGG 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1686 AATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGG 1745
Query 1620 CGTGATGTGGAACAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAAGAGGGTG 1679
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1746 CGTGATGTGGAGCAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAGGAGGGTG 1805
Query 1680 CGAGAGGCTGAGCGGTTCAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTCTTT 1739
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1806 CGAGAGGCTGAGCGGTTTAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTTTTT 1865
Query 1740 GAAAATATGCCTGATGATCTCCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAG 1799
|| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1866 GAGAATATGCCTGATGATCTTCAAAGAGATATAAGACGACACCTCTTCAAATTTCTCAAG 1925
Query 1800 AAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTG 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1926 AAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTG 1985
Query 1860 AAACAGAGGACATATATAGGGAGTAGCACAGTGTTGCACCGCGGAGGTCTAGTTGAGAAA 1919
|||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1986 AAACAGAGGACATACATAGGGAGTAGCACAGTGTTGCACCGTGGAGGACTAGTTGAGAAA 2045
Query 1920 ATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTCCT 1979
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2046 ATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGATGGTTCTGTTCTTCCA 2105
Query 1980 TTATATGAAGGAGACGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCT 2039
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2106 TTATATGAAGGCGATGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCT 2165
Query 2040 GTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGCAACAGAAAT 2099
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2166 GTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGTAGCAGAAAT 2225
Query 2100 GTTAGGTGTGTGACAAATGTGGAGGCATTTTCGCTGAGTGTGGCAGATCTTGAAGACGTA 2159
|| ||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct 2226 GTAAGGTGTGTGACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCCGATCTGGAAGACGTA 2285
Query 2160 ACAAGCTTGTTCTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGAC 2219
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2286 ACGAGCTTGTTTTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGAC 2345
Query 2220 TCTCCATATTGGAGGCTACAAGCTGCTAGGCAGATTCAAGTGGCGTGGAGATATCGTAGG 2279
||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct 2346 TCTCCATATTGGAGGCTACGAGCGGCTAGGCAGATTCAAGTGGCGTGGAGATACCGTAGG 2405
Query 2280 AGACGGCTTCAGAGATTATGTACTCCTCAGTCTAGTTACAGCCTTTAGTTTGTATTCCTC 2339
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct 2406 AGACGGCTTCATAGATTATGCACTCCTCAGTCTAGTTATAGCCTTTAGTTTGTATTCTTC 2465
Query 2340 ATTTTTGAT 2348
||| |||||
Sbjct 2466 ATTCTTGAT 2474
> AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gated
channel 19 | chr3:6045002-6048488 FORWARD LENGTH=2719
Length=2719
Score = 1796 bits (972), Expect = 0.0
Identities = 1642/1956 (84%), Gaps = 84/1956 (4%)
Strand=Plus/Plus
Query 378 GATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGACAATTAGGGATGTGTAAT 437
||||| ||||| || ||| |||||||||||||||| |||||||||||||||||||| |||
Sbjct 633 GATGATTTCGTCTTCAAAAACGCAAATCTCTTGAGATCTGGACAATTAGGGATGTGCAAT 692
Query 438 GATCCTTACTGTACTACTTGCCCTTCTTACTACAACCG-TAAGGCTGCTCAAAT-CCCTA 495
||||||||||| |||||||||||||||||||||||||| || ||||||||| | | | |
Sbjct 693 GATCCTTACTGCACTACTTGCCCTTCTTACTACAACCGCCAA-GCTGCTCAATTGCAC-A 750
Query 496 CTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAATGCTCTGTATGATGATGCTA 555
|||| |||||||||| || | | | || || | | || |||||||| ||||||||
Sbjct 751 CTTCCAGAGTTTCTG-CC-TCTAGGTT--TCG---C--ACTGTTCTGTATGGTGATGCTA 801
Query 556 AAGGTTGGGC-AAGGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAAT 614
||||||||| || | ||||||| ||||||||| ||||| |||||| ||||| ||||||
Sbjct 802 GAGGTTGGGCTAA-GCGATTTGCCTCCTCTGTTCGTAGATGCTTACCCGGAATAATGAAT 860
Query 615 CCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTT-GTTAGC 673
|||||| ||||| |||||| |||||||| | |||| ||| ||||| |||| | | ||
Sbjct 861 CCTCATTCCAAATTTGTTCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAG-TGGC 919
Query 674 TATTTTTATAGATCCTCTCTTCTTCTTCCTCATAAAAG-TCCAA-GAGCAAAACAAATGC 731
||||||||||| ||||||||||| |||||| | | | ||||| || | |||||||||
Sbjct 920 CATTTTTATAGACCCTCTCTTCTTTTTCCTC-TTATTGATCCAACAAG-ACAACAAATGC 977
Query 732 ATTA-TGATTGATTGGCCGAT--GACTAAAGCATTTGTAG-CTGTTAGAAGTGTAACAGA 787
| || |||||||||| || | |||||||| ||| || | || |||||||| |||| ||
Sbjct 978 A-TAGCGATTGATTGG-CG-TGCGACTAAAGTATTGGT-GTCTCTTAGAAGTATAACGGA 1033
Query 788 TGTTATATTCACT-ATGAACATTCTGCTTCAGTTCCGATTGGCCTACGTAGCTCGTGAGT 846
| |||||||| | || ||||||||||||||||| | |||||||| ||||||| |||||
Sbjct 1034 TCTTATATTC-TTCATTAACATTCTGCTTCAGTTTAGGTTGGCCTATGTAGCTCCTGAGT 1092
Query 847 CTACG-GTAGTTGGTGCTGGCCAGTTAGTTAG-TCATCCCaa-aaaaaTTGCCCTTCATT 903
||| | |||||||||| |||||||||||| | |||| |||| ||||||||| | ||||
Sbjct 1093 CTA-GAATAGTTGGTGCCGGCCAGTTAGTT-GATCAT-CCAAGAAAAATTGCTCGCCATT 1149
Query 904 ACTTTAGAGGAAAGTTTTTCCTTGACTTGTTCATAGT-GATGCCACTTCCACAGATATTG 962
|||| ||||||||||| |||||||| |||||||||| | ||| ||||||||||| ||
Sbjct 1150 ACTTCCGAGGAAAGTTTCTCCTTGACATGTTCATAGTCTTTCCCA-TTCCACAGATAATG 1208
Query 963 ATTTTATGGATAATACCAGAACATTTGGGTGCATC-CGGGGCAA-ACTATGCGAAAAACC 1020
|| ||| ||||||||||| ||| || || || | | ||| || | | || |||| |
Sbjct 1209 ATATTAAGGATAATACCATTACACTTAGGCACA-CGCAGGG-AAGAATCTGAGAAACAGA 1266
Query 1021 TTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTC-TACCAT-T 1078
|| |||| ||| | |||||||| ||||||||||||||||||||||||| || |||| | |
Sbjct 1267 TTTTACGCGCTACGGTTCTTTTTCAATACATTCCAAAGTTATATAGAC-TCTTACC-TCT 1324
Query 1079 TCTTGCTGGACAAACACCGACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTAT 1138
|||||||||||||||| | || || |||||||||||||||||||||||||||||||||||
Sbjct 1325 TCTTGCTGGACAAACATCTACTGGCTTCATATTTGAGTCAGCTTGGGCTAATTTTGTTAT 1384
Query 1139 TAATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGG 1198
|||||||||||| |||||||||||||| || | ||||||||||||||||||||| | ||
Sbjct 1385 TAATCTTCTCACCTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCTCTCTGC 1444
Query 1199 TCTGCAGAGAGTTAATCAATGCCTTC-GAAATGCTTGCGGTAAT-TTTGAGC-G-TGAAT 1254
||||||||||||||| ||||| | | | ||||||| || ||| ||| || | ||||
Sbjct 1445 TCTGCAGAGAGTTAAGAAATGCATGCTG-AATGCTT--GG-AATATTTCTGCGGATGAAC 1500
Query 1255 GTCATG--ATCTTATAGATTGTGGTAATGGAA-TTA-GCACT-G-TGTTAGTACGAGCTA 1308
|| | | ||||||| ||||||| | ||||| ||| ||| | | || | ||||| |
Sbjct 1501 GT-A-GAAATCTTATCGATTGTGCTCGTGGAAGTTATGCA-TCGAAGTCACAACGAGAT- 1556
Query 1309 C-CTGGAGAGATAATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTT-TTCCTTATGG 1366
| |||||||||||||| |||| |||||||||||| |||||| |||||| | || |||||
Sbjct 1557 CTGTGGAGAGATAATGCTAGTGTCAATGCTTGTTTTCAAGAAAATGGTTATACC-TATGG 1615
Query 1367 AATCTATTTAAAAGCAGTCAATCTAACCAATCATTCTAGTCTCTTCACAAGATACAGTTA 1426
|||||||| || ||||| ||||| |||||| | |||||| |||||||||||| ||||||
Sbjct 1616 GATCTATTTGAAGGCAGTGAATCTTACCAATGAATCTAGTTTCTTCACAAGATTCAGTTA 1675
Query 1427 CTCTCTCT-TCTGGGGCTTCCAGCAAATCAGCACTCTTGCTGGAAACCAAGT-CCCAAGC 1484
||||| | | ||||| ||||| ||||| ||||| |||||||||||| | | ||||||
Sbjct 1676 TTCTCTGTAT-TGGGGATTCCAACAAATAAGCACACTTGCTGGAAACTTA-TCCCCAAGT 1733
Query 1485 TACTTTCTAGGG-GAGGTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTGCTTTT 1543
|||| | ||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1734 TACTCAGT-GGGTGAGGTTTTCTTTACAATGGGTATCATTGGACTAGGGCTTTTGCTTTT 1792
Query 1544 TGCGCTTCTTATTGGTAATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGA 1603
||||| ||||| ||||| ||||| || ||||||||| | |||| | ||||| ||||
Sbjct 1793 TGCGCGGCTTATCGGTAACATGCACAACTTCCTTCAATCACTTGATCGAAGGAGGATGGA 1852
Query 1604 AATGACGCTAAGACGGCGTGATGTGGAACAATGGATGAGCCATAGACGGTTGCCAGATGG 1663
||||| ||| ||| |||||||||||| || ||||||||||||||||| |||||||| |
Sbjct 1853 AATGATGCTGAGAAAGCGTGATGTGGAGCAGTGGATGAGCCATAGACGTTTGCCAGAAGA 1912
Query 1664 TATAAGAAAGAGGGTGCGAGAGGCTGAGCGGTTCAAC-TGGGCTGCTACTAGAGGCGTTA 1722
|||||||||||||||| |||||| |||||||| | || |||||||| || ||||| ||||
Sbjct 1913 TATAAGAAAGAGGGTGAGAGAGGTTGAGCGGTAC-ACTTGGGCTGCGACAAGAGGAGTTA 1971
Query 1723 ACGAAGAATTGCTCTTTGAAAATATGCCTGATGATCTCCAAAGAGATATAAGACGACACC 1782
||||||||||||| ||||| || ||||||||||| || ||||||||||||||| ||||||
Sbjct 1972 ACGAAGAATTGCTATTTGAGAACATGCCTGATGACCTTCAAAGAGATATAAGAAGACACC 2031
Query 1783 TCTTTAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATG 1842
|||| |||||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct 2032 TCTTCAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAATCAGTTTTAGATT 2091
Query 1843 CAATCCGTGAGAGGCTGAAACAGAGGACATATATAGGGAGTAGCACAGTGTTGCACCGCG 1902
||||| | |||||||||||||||||||| || ||| |||||||||| |||||||| | |
Sbjct 2092 CAATCAGAGAGAGGCTGAAACAGAGGACTTACATAAGGAGTAGCACGGTGTTGCATCACA 2151
Query 1903 GAGGTCTAGTTGAGAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAG 1962
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2152 GAGGTCTAGTAGAGAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAG 2211
Query 1963 ACGGTTCTGTTCTTCCTTTAT-ATGAAGGAGACGTTTGTGGTGAAGAACTCCTCACTTGG 2021
||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||
Sbjct 2212 ACGGTTCTGTTCTTCCTTTATCA-GAAGGAGACGTTTGTGGTGAAGAACTTCTCACTTGG 2270
Query 2022 TGCCTCGAACGCTCTTCTGTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGA 2081
|||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct 2271 TGCCTC------TCTTCTATAAACCCCGATGGGACGAGGATAAAGATGCCACCAAAGGGA 2324
Query 2082 TTGCTTAGCAACAGAAATGTTAGGTGTGTGACAAATGTGGAGGCATTTTCGCTGAGTGTG 2141
||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2325 TTGGTTAGCAACAGAAATGTTAGGTGTGTGACAAACGTGGAGGCGTTTTCGCTGAGTGTA 2384
Query 2142 GCAGATCTTGAAGACGTAACAAGCTTGTTCTCGAGATTCTTGAGGAGTCATAGAGTCCAA 2201
|||||||||||||| |||||||||||||| || |||||||| || || ||| |||| |||
Sbjct 2385 GCAGATCTTGAAGATGTAACAAGCTTGTTTTCAAGATTCTTAAGAAGCCATCGAGTGCAA 2444
Query 2202 GGAGCCATAAGGTACGACTCTCCATATTGGAGGCTACAAGCTGCTAGGCAGATTCAAGTG 2261
||||| ||||||||||| ||||| ||||||||| ||| ||| |||| |||||| ||||||
Sbjct 2445 GGAGCTATAAGGTACGAGTCTCCTTATTGGAGGTTACGAGCAGCTATGCAGATCCAAGTG 2504
Query 2262 GCGTGGAGATATCGTAGGAGACGGCTTCAGAGATTA 2297
|| |||||||| || | ||||| || |||||||||
Sbjct 2505 GCTTGGAGATACCGAAAGAGACAACTCCAGAGATTA 2540
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116565665490
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5