BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929632
Length=2263
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleot... 1535 0.0
AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gat... 1044 0.0
> AT3G17700.1 | Symbols: CNBT1, CNGC20, ATCNGC20 | cyclic nucleotide-binding
transporter 1 | chr3:6048916-6052552 FORWARD LENGTH=2556
Length=2556
Score = 1535 bits (831), Expect = 0.0
Identities = 1075/1190 (90%), Gaps = 27/1190 (2%)
Strand=Plus/Plus
Query 19 AAATGGCTTCACTCAACGAAAACGAGGAGACTCCTC-TGCTTCCAATTTCAGACTCATCA 77
|||||||||| | |||||||||||| || | ||| | ||||||| ||||||||| |||||
Sbjct 157 AAATGGCTTCCCACAACGAAAACGATGATATTCC-CATGCTTCCGATTTCAGACCCATCA 215
Query 78 TCTCGTACT--AG--TGA--TTTCACTTCCAGGACTCGTACCGTTTCCCTCTCAAACCTT 131
||||||||| || || |||||||||||||| ||||| |||||| |||||||||| |
Sbjct 216 TCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTAGCGTTTCTCTCTCAAACCCT 275
Query 132 TCTTCCTCCGTTGACGGATTTGAAAATTCAACTGTGGTTTTTGGCTACACAGGTCCTCTT 191
|||||||| |||| |||||||| | ||| ||||||||||| |||||||| |||||||||
Sbjct 276 ACTTCCTCCATTGAAGGATTTGACACTTCCACTGTGGTTTTAGGCTACACGGGTCCTCTT 335
Query 192 CGAACTCGGAGACATCCTCCGTTACTTCAACTGAGTGGTCCTCTTTA-CTCTACTTGCAA 250
||||||| ||||| |||||| ||| ||||| |||||||||||| ||| ||||||| ||||
Sbjct 336 CGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTCCTC-TTACCTCTACTCGCAA 394
Query 251 ACCTGAACCTCTCTTTCTTCCTCTTCCTTCTTCTGATTCCGTTGGTGTCTCTTCTCAGCC 310
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 395 GCATGAACCTCTCTTTCTTCCTCATCCTTCTTCTGATTCCGTTGGTGTCTCTTCTCAGCC 454
Query 311 TGAGAGGGATCCTTCTTTTTCTGCCCTTGAACACGACAACTCCTCAGACGATGAGTCCCT 370
||||||| ||||||||||| |||| |||||||| | ||||||||||| ||||||| | |
Sbjct 455 TGAGAGGTATCCTTCTTTTGCTGCTCTTGAACATAAAAACTCCTCAGAGGATGAGTTCGT 514
Query 371 TTTGAAATACGCAAATCTCTTG-GGATCTGGACAATTAGGTATTTGTAATGATCCTTACT 429
||||||| |||||||||||||| || ||||||||||| || || ||||||||||||||||
Sbjct 515 TTTGAAACACGCAAATCTCTTGAGG-TCTGGACAATTGGGAATGTGTAATGATCCTTACT 573
Query 430 GTACTACTTGCCCTTCTGATTACTTCCGTAAAACAGCTCAAACCCCTACTCCCAGAGTTT 489
||||||||||||||||| | ||| |||||| | ||||||| ||||||| | |||||||
Sbjct 574 GTACTACTTGCCCTTCTTACTACAACCGTAAGGCTGCTCAAATCCCTACTTCTAGAGTTT 633
Query 490 CTGCCATTTTTTATTCCCCGTTCCATAATGCTCTGTATGATGATGCTAAAGATTGGGCGA 549
||||| ||||| ||||| |||||||||| |||||||||||||||||||||| |||||| |
Sbjct 634 CTGCCCTTTTTGATTCCACGTTCCATAACGCTCTGTATGATGATGCTAAAGGTTGGGCAA 693
Query 550 GGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAG 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 GGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAG 753
Query 610 AGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTTGTTAGCTATTTTTATAGATC 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 AGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTTGTTAGCTATTTTTATAGATC 813
Query 670 CTCTCTTCTTCTTCCTCATAAAAGTTCAAGAGCAAAACAAATGCATTATGATTGATTGGC 729
| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 814 CCCTCTTCTTCTTCCTCATAAAAGTCCAAGAGCAAAACAAATGTATTATGATTGATTGGC 873
Query 730 CGATGGCTAAAGC-TTTGGTAGCTGTTAA-AAGTGTAACAGATATTATAATCTCTGTGAA 787
||||| ||||||| |||| ||||||| || ||||||||||||| ||||| || || ||||
Sbjct 874 CGATGACTAAAGCATTTG-TAGCTGT-AAGAAGTGTAACAGATGTTATATTCACTATGAA 931
Query 788 CATTCTGCTTCAGTTCCGAATGGCCTATGTAGCTCGTGAGTCTACGGTAGTTGGTGCTGG 847
|||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 932 CATTCTACTTCAGTTCCGATTGGCCTATGTAGCTCGTGAGTCTACGGTAGTTGGAGCTGG 991
Query 848 CCAGTTAGTTAGTCATCCCaaaaaaaTTGCCCTTCATTACTTTAGAGGAAAGTTTTTCCT 907
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct 992 CCAGTTAGTTAGTCATCCCAAAAAAATTGCCCTTCATTACCTCAAAGGAAAGTTTTTCCT 1051
Query 908 TGACTTGTTCATAGTGATGCCACTTCCACAGATATTGATATTATGGATAATACCAGAACA 967
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 1052 TGACTTGTTCATAGTGATGCCACTTCCACAGATATTGATACTATGGATAATACCAGCACA 1111
Query 968 CTTGGGGGCATCTGGGATATCCGGGGCAAACTACACGAAAAACCTTTTACGCGCTGTAGT 1027
||||| ||||| | ||||||||||| ||||||||||| |||| |||| |||
Sbjct 1112 TTTGGGTGCATC--------C-GGGGCAAACTATGCGAAAAACCTTCTACGAGCTGCAGT 1162
Query 1028 TCTTTTCCAATACACTTC-AAAGTTATATAGACTTCTACCATTTCTTGCTGGACAAACAC 1086
|||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1163 TCTTTTCCAATACA-TTCCAAAGTTATATAGACTTCTACCGTTTCTTGCTGGACAAACAC 1221
Query 1087 AGACCGGGTTCATATTTGAGTCAGCTTGGGCTAATTTTGTCATTAATCTTCTCACTTTCA 1146
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1222 CTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATTAATCTTCTCACTTTCA 1281
Query 1147 TGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGTCTGCAG 1196
|||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1282 TGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATTTGGTCTGCAG 1331
Score = 1430 bits (774), Expect = 0.0
Identities = 939/1019 (92%), Gaps = 9/1019 (1%)
Strand=Plus/Plus
Query 1253 CAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATATATTTAAAAGCAGTCAATCT 1312
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1457 CAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAAGCAGTCAATCT 1516
Query 1313 TACCAATCATTCTAGTCTCTTCACAAGATACAGCTACTCTCTCTTCTGGGGTTTCCAGCA 1372
|||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1517 TACCAATCATTCTAATCTCTTCACAAGATACAGTTACTCTCTCTTCTGGGGCTTCCAGCA 1576
Query 1373 AATAAGCACTCTTGCTGGAAACCAAGTCCCAAGCTACTTTCTAGGGGAGGTCTTCTTTAC 1432
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1577 AATCAGCACTCTTGCTGGCAACCAAGTCCCAAGCTACTTTCTAGGGGAGGTCTTCTTTAC 1636
Query 1433 TATGGGTATCACTGGCCTGGGGCTTTTGCTTTTTGCCCTTCTTATTGGTAATATGCAAAA 1492
||||||||||| ||| || |||||||| |||||||| |||||||||||||||||||||||
Sbjct 1637 TATGGGTATCATTGGACTAGGGCTTTTACTTTTTGCGCTTCTTATTGGTAATATGCAAAA 1696
Query 1493 TTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATGTGGA 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 TTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATGTGGA 1756
Query 1553 GCAATGGATGAGCCATAGACGGTTGCCAAATGGTATAAGAAAGAGGGTGCGAGAGGCTGA 1612
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1757 GCAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAGGAGGGTGCGAGAGGCTGA 1816
Query 1613 ACGGTTCAACTGGGCTGCTACCAGAGGCGTTAACGAAGAATTACTCTTTGAGAATATGCC 1672
||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 1817 GCGGTTTAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTTTTTGAGAATATGCC 1876
Query 1673 TGATGATCTTCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAGAAGGTGAGAAT 1732
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1877 TGATGATCTTCAAAGAGATATAAGACGACACCTCTTCAAATTTCTCAAGAAGGTGAGAAT 1936
Query 1733 ATTTTCGTTGATGGATGAATCAATCTTAGATGCCATCAGTGAGAGGCTGAAACAGAGGAC 1792
||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1937 ATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTGAAACAGAGGAC 1996
Query 1793 ATACATAGGGAATAGCACAGTGTTGCGCAGCGGAGGTCTAGTTGAGAAAATGGTATTCAT 1852
||||||||||| |||||||||||||| | | ||||| |||||||||||||||||||||||
Sbjct 1997 ATACATAGGGAGTAGCACAGTGTTGCACCGTGGAGGACTAGTTGAGAAAATGGTATTCAT 2056
Query 1853 TGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTACATTATCGGAAGG 1912
|||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct 2057 AGTGAGAGGTGAGATGGAGAGCATTGGAGAAGATGGTTCTGTTCTTCCATTATATGAAGG 2116
Query 1913 CGACGTTTGTGGCGAAGAACTTCTCACTTGGTGCCTCAAACGCTTTTCTGTAAACCCTGA 1972
||| |||||||| |||||||| ||||||||||||||| |||||| |||||||||||| ||
Sbjct 2117 CGATGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCTGTAAACCCCGA 2176
Query 1973 TGGGACGAGAATAAAGATGCCACCAAAGGGATTGGTTAGCAACAGAAATGTTAGGTGTGT 2032
||||||||| |||| ||||||| ||||||||||| |||| | ||||||||| ||||||||
Sbjct 2177 TGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGTAGCAGAAATGTAAGGTGTGT 2236
Query 2033 GACAAATGTGGAAGCGTTTTCGCTGAGTATAGCAGATCTTGAAGACGTAGCGAGCTTGTT 2092
|||||||||||| ||||||||||||||| |||| ||||| ||||||||| ||||||||||
Sbjct 2237 GACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCCGATCTGGAAGACGTAACGAGCTTGTT 2296
Query 2093 CTCGAGATTCCTAAGGAGCCATAGAGTCCAAGGAGCCATAAGGTATGAGTCTCCTTATTG 2152
||||||||| | ||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct 2297 TTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGACTCTCCATATTG 2356
Query 2153 GAGGCTACG-GC----AG--A--TTCAAGTGGCTTGGAGATACCGAAGGAGACGGCTTCA 2203
||||||||| || || | |||||||||| ||||||||||| ||||||||||||||
Sbjct 2357 GAGGCTACGAGCGGCTAGGCAGATTCAAGTGGCGTGGAGATACCGTAGGAGACGGCTTCA 2416
Query 2204 GAGAGTATACAGTGCTCAGTCTAGTTACATCCGTTAGGTTATATGCTTCATTCTCGATG 2262
||| ||| || | ||||||||||||| | || |||| || ||| ||||||||| ||||
Sbjct 2417 TAGATTATGCACTCCTCAGTCTAGTTATAGCCTTTAGTTTGTATTCTTCATTCTTGATG 2475
> AT3G17690.1 | Symbols: ATCNGC19, CNGC19 | cyclic nucleotide gated
channel 19 | chr3:6045002-6048488 FORWARD LENGTH=2719
Length=2719
Score = 1044 bits (565), Expect = 0.0
Identities = 862/1003 (86%), Gaps = 29/1003 (3%)
Strand=Plus/Plus
Query 1253 CAATGCTTGTTTCCAAGAAGATGGTT-TTCCTTATGGAATATATTTAAAAGCAGTCAATC 1311
|||||||||||| |||||| |||||| | || ||||| || ||||| || ||||| ||||
Sbjct 1580 CAATGCTTGTTTTCAAGAAAATGGTTATACC-TATGGGATCTATTTGAAGGCAGTGAATC 1638
Query 1312 TTACCAATCATTCTAGTCTCTTCACAAGATACAGCTACTCTCTCT-TCTGGGGTTTCCAG 1370
|||||||| | |||||| |||||||||||| ||| || ||||| | | ||||| |||||
Sbjct 1639 TTACCAATGAATCTAGTTTCTTCACAAGATTCAGTTATTCTCTGTAT-TGGGGATTCCAA 1697
Query 1371 CAAATAAGCACTCTTGCTGGAAACCAAGT-CCCAAGCTACTTTCTAGGG-GAGGTCTTCT 1428
||||||||||| |||||||||||| | | |||||| |||| | ||| ||||| ||||
Sbjct 1698 CAAATAAGCACACTTGCTGGAAACTTA-TCCCCAAGTTACTCAGT-GGGTGAGGTTTTCT 1755
Query 1429 TTACTATGGGTATCACTGGCCTGGGGCTTTTGCTTTTTGCCCTTCTTATTGGTAATATGC 1488
|||| |||||||||| ||| || ||||||||||||||||| | ||||| ||||| ||||
Sbjct 1756 TTACAATGGGTATCATTGGACTAGGGCTTTTGCTTTTTGCGCGGCTTATCGGTAACATGC 1815
Query 1489 AAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATG 1548
| || ||||||||| | |||| | ||||| ||||||||| ||||||| ||||||||
Sbjct 1816 ACAACTTCCTTCAATCACTTGATCGAAGGAGGATGGAAATGATGCTGAGAAAGCGTGATG 1875
Query 1549 TGGAGCAATGGATGAGCCATAGACGGTTGCCA-AATGGTATAAGAAAGAGGGTGCGAGAG 1607
||||||| ||||||||||||||||| |||||| || | |||||||||||||||| |||||
Sbjct 1876 TGGAGCAGTGGATGAGCCATAGACGTTTGCCAGAA-GATATAAGAAAGAGGGTGAGAGAG 1934
Query 1608 GCTGAACGGTTCAAC-TGGGCTGCTACCAGAGGCGTTAACGAAGAATTACTCTTTGAGAA 1666
| ||| |||| | || |||||||| || ||||| |||||||||||||| || ||||||||
Sbjct 1935 GTTGAGCGGTAC-ACTTGGGCTGCGACAAGAGGAGTTAACGAAGAATTGCTATTTGAGAA 1993
Query 1667 TATGCCTGATGATCTTCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAGAAGGT 1726
||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1994 CATGCCTGATGACCTTCAAAGAGATATAAGAAGACACCTCTTCAAATTTCTCAAGAAGGT 2053
Query 1727 GAGAATATTTTCGTTGATGGATGAATCAATCTTAGATGCCATCAGTGAGAGGCTGAAACA 1786
|||||||||||||||||||||||||||| | |||||| | ||||| ||||||||||||||
Sbjct 2054 GAGAATATTTTCGTTGATGGATGAATCAGTTTTAGATTCAATCAGAGAGAGGCTGAAACA 2113
Query 1787 GAGGACATACATAGGGAATAGCACAGTGTTGCG-CAGCGGAGGTCTAGTTGAGAAAATGG 1845
|||||| |||||| ||| |||||| ||||||| || | |||||||||| ||||||||||
Sbjct 2114 GAGGACTTACATAAGGAGTAGCACGGTGTTGCATCA-CAGAGGTCTAGTAGAGAAAATGG 2172
Query 1846 TATTCATTGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTACATTAT 1905
||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2173 TATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTCCTTTAT 2232
Query 1906 CGGAAGGCGACGTTTGTGGCGAAGAACTTCTCACTTGGTGCCTCAAACGCTTTTCTGTAA 1965
| ||||| ||||||||||| |||||||||||||||||||||||| | || || |||
Sbjct 2233 CAGAAGGAGACGTTTGTGGTGAAGAACTTCTCACTTGGTGCCTCT--C--TT--CTATAA 2286
Query 1966 ACCCTGATGGGACGAGAATAAAGATGCCACCAAAGGGATTGGTTAGCAACAGAAATGTTA 2025
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2287 ACCCCGATGGGACGAGGATAAAGATGCCACCAAAGGGATTGGTTAGCAACAGAAATGTTA 2346
Query 2026 GGTGTGTGACAAATGTGGAAGCGTTTTCGCTGAGTATAGCAGATCTTGAAGACGTAGCGA 2085
||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||| | |
Sbjct 2347 GGTGTGTGACAAACGTGGAGGCGTTTTCGCTGAGTGTAGCAGATCTTGAAGATGTAACAA 2406
Query 2086 GCTTGTTCTCGAGATTCCTAAGGAGCCATAGAGTCCAAGGAGCCATAAGGTATGAGTCTC 2145
||||||| || |||||| |||| |||||| |||| |||||||| |||||||| |||||||
Sbjct 2407 GCTTGTTTTCAAGATTCTTAAGAAGCCATCGAGTGCAAGGAGCTATAAGGTACGAGTCTC 2466
Query 2146 CTTATTGGAGGCTACG-GCAG--AT-----TC-AAGTGGCTTGGAGATACCGAAGGAGAC 2196
||||||||||| |||| |||| || || ||||||||||||||||||||| |||||
Sbjct 2467 CTTATTGGAGGTTACGAGCAGCTATGCAGATCCAAGTGGCTTGGAGATACCGAAAGAGAC 2526
Query 2197 GGCTTCAGAGAGTATACAGTGCTCAGTCTAGTTACATCCGTTA 2239
|| |||||| || ||| |||||| || | || || ||||||
Sbjct 2527 AACTCCAGAGATTAAACACTGCTCACTCCAATTCCAACCGTTA 2569
Score = 566 bits (306), Expect = 4e-160
Identities = 672/841 (80%), Gaps = 56/841 (7%)
Strand=Plus/Plus
Query 375 AAATACGCAAATCTCTTGGGATCTGGACAATTAGGTATTTGTAATGATCCTTACTGTACT 434
||| |||||||||||||| |||||||||||||||| || || |||||||||||||| |||
Sbjct 648 AAAAACGCAAATCTCTTGAGATCTGGACAATTAGGGATGTGCAATGATCCTTACTGCACT 707
Query 435 ACTTGCCCTTCTGATTACTTCCGTAAAACAGCTCAA-ACCCCTACTCCCAGAGTTTCTGC 493
|||||||||||| | ||| ||| || | |||||| | | ||| |||||||||||||
Sbjct 708 ACTTGCCCTTCTTACTACAACCGCCAAGCTGCTCAATTGCAC-ACTTCCAGAGTTTCTGC 766
Query 494 CATTTTTTATTCCCCGTTCCATAATGCTCTGTATGATGATGCTAAAGATTGGGCGAGGAG 553
| | || ||| | | || |||||||| |||||||| || |||||| | | |
Sbjct 767 C----TCTA-----GGTTTCGCACTGTTCTGTATGGTGATGCTAGAGGTTGGGCTAAGCG 817
Query 554 ATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAGAGGT 613
|||||| ||||||||| ||||| |||||| ||||| |||||||||||| ||||| ||
Sbjct 818 ATTTGCCTCCTCTGTTCGTAGATGCTTACCCGGAATAATGAATCCTCATTCCAAATTTGT 877
Query 614 TCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTT-GTTAGCTATTTTTATAGATCCTC 672
|||| |||||||| | |||| ||| ||||| |||| | | || ||||||||||| ||||
Sbjct 878 TCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAG-TGGCCATTTTTATAGACCCTC 936
Query 673 TCTTCTTCTTCCTCATAAAAG-TTCAA-GAGCAAAACAAATGCATTA-TGATTGATTGGC 729
||||||| |||||| | | | | ||| || | |||||||||| || ||||||||||
Sbjct 937 TCTTCTTTTTCCTC-TTATTGATCCAACAAG-ACAACAAATGCA-TAGCGATTGATTGG- 992
Query 730 CGATG-G-CTAAAGCT-TTGGTAG-CTGTTAAAAGTGTAACAGATATTATAATC-TCTGT 784
|| || | |||||| | ||||| | || ||| |||| |||| ||| ||||| || || |
Sbjct 993 CG-TGCGACTAAAG-TATTGGT-GTCTCTTAGAAGTATAACGGATCTTATATTCTTC-AT 1048
Query 785 GAACATTCTGCTTCAGTTCCGAATGGCCTATGTAGCTCGTGAGTCTACG-GTAGTTGGTG 843
||||||||||||||||| | ||||||||||||||| |||||||| | |||||||||
Sbjct 1049 TAACATTCTGCTTCAGTTTAGGTTGGCCTATGTAGCTCCTGAGTCTA-GAATAGTTGGTG 1107
Query 844 CTGGCCAGTTAGTTAG-TCATCCCaa-aaaaaTTGCCCTTCATTACTTTAGAGGAAAGTT 901
| |||||||||||| | |||| |||| ||||||||| | |||||||| ||||||||||
Sbjct 1108 CCGGCCAGTTAGTT-GATCAT-CCAAGAAAAATTGCTCGCCATTACTTCCGAGGAAAGTT 1165
Query 902 TTTCCTTGACTTGTTCATAGT-GATGCCACTTCCACAGATATTGATATTATGGATAATAC 960
| |||||||| |||||||||| | ||| ||||||||||| |||||||| |||||||||
Sbjct 1166 TCTCCTTGACATGTTCATAGTCTTTCCCA-TTCCACAGATAATGATATTAAGGATAATAC 1224
Query 961 CAGAACACTTGGGGGCA-TCTGGGATATCCGGGGCAAACTACACGAAAAACCTTTTACGC 1019
|| |||||| || || | |||| | | || || | |||| | ||||||||
Sbjct 1225 CATTACACTTAGGCACACGCAGGGA-A------G-AATCT-GA-GAAACAGATTTTACGC 1274
Query 1020 GCTGTAGTTCTTTTCCAATACACTT-CAAAGTTATATAGACTTC-TACCAT-TTCTTGCT 1076
||| |||||||| ||||||| || ||||||||||||||| || |||| | ||||||||
Sbjct 1275 GCTACGGTTCTTTTTCAATACA-TTCCAAAGTTATATAGAC-TCTTACC-TCTTCTTGCT 1331
Query 1077 GGACAAACA-CAGACCGGGTTCATATTTGAGTCAGCTTGGGCTAATTTTGTCATTAATCT 1135
||||||||| | || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1332 GGACAAACATC-TACTGGCTTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATTAATCT 1390
Query 1136 TCTCACTTTCATGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGTCTGCA 1195
|||||| |||||||||||||| || | ||||||||||||||||||||| | || ||||||
Sbjct 1391 TCTCACCTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCTCTCTGCTCTGCA 1450
Query 1196 G 1196
|
Sbjct 1451 G 1451
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112298619165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5