BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929929
Length=355
Score E
Sequences producing significant alignments: (Bits) Value
AT3G20075.1 | Symbols: CYP705A14P | a pseudogene with cytochrom... 449 6e-126
AT3G20100.1 | Symbols: CYP705A19 | cytochrome P450, family 705,... 300 7e-81
AT3G20083.1 | Symbols: CYP705A16 | a member of A-type cytochrom... 287 5e-77
AT3G20120.1 | Symbols: CYP705A21 | cytochrome P450, family 705,... 217 7e-56
AT5G47990.1 | Symbols: CYP705A5, THAD, THAD1 | cytochrome P450,... 195 3e-49
AT2G05180.1 | Symbols: CYP705A6 | cytochrome P450, family 705, ... 100 7e-21
> AT3G20075.1 | Symbols: CYP705A14P | a pseudogene with cytochrome
P450 domain | chr3:7007316-7007653 FORWARD LENGTH=338
Length=338
Score = 449 bits (243), Expect = 6e-126
Identities = 293/317 (92%), Gaps = 3/317 (1%)
Strand=Plus/Plus
Query 16 ATGC-TATTATGAGAGATCCTGATTCTTGG-GAAGATCCTAATGAGTTTAAGCCAGAGAG 73
|||| ||| |||| ||||||||| |||||| || | ||||||||||||||||||||||||
Sbjct 21 ATGCTTATGATGATAGATCCTGAATCTTGGTGATG-TCCTAATGAGTTTAAGCCAGAGAG 79
Query 74 GTTTTTAGCTTCTTTTGGATCAGGGCAAGAAGATGCACTTAAGTACATTCCTTTCGGGAG 133
|||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||| ||
Sbjct 80 GTTTTTAGCTTCTTTTGGATCAGGGCAAGACGATGCACTTCAGTACATTCTTTTCGGAAG 139
Query 134 CGGAAGGAGAGGCTGTCCGGGAGTAAATCTGAGTTACATCTTTGTAGGAACCGCGGTTGG 193
|||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 140 CGGAAGGAGATGCTGTCTGGGAGTAAATCTGAGTTACATCTTTGTAGGAACTGCGATTGG 199
Query 194 AATGATGGTGCAATGCTTTGACTGGAAAATCAAAGGAGAAAAGGTTGACATGGAAGAGGC 253
||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 200 AATGATGTTGCAATGCTTTGACTGGAAAACCAAAGGAGACAAGGTTGACATGGAAGAGGC 259
Query 254 CATTGGAGGACTGAACCTGACCATGGCGCATCCCCTCAAGTGCATTCCTGTTGCTAGAAC 313
|||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 260 CATTCGAGGATTGAACCTGACCATGGCTCATCCCCTTAAGTGCATTCCTGTTGCTAGAAA 319
Query 314 CCTAAACCCTTTGACTT 330
||||||||||||| |||
Sbjct 320 CCTAAACCCTTTGGCTT 336
> AT3G20100.1 | Symbols: CYP705A19 | cytochrome P450, family 705,
subfamily A, polypeptide 19 | chr3:7018995-7020901 FORWARD
LENGTH=1813
Length=1813
Score = 300 bits (162), Expect = 7e-81
Identities = 288/345 (83%), Gaps = 24/345 (7%)
Strand=Plus/Plus
Query 1 TTGTTGTTAATGCTTATGCTATTATGAGAGATCCTGAT-TCTTGGGAAGATCCTAATGAG 59
|||||||||||| ||||||| | ||||||||||| || || |||||||| ||| | |||
Sbjct 1218 TTGTTGTTAATGGTTATGCTGTGATGAGAGATCCAAATGTC-TGGGAAGACCCTGAGGAG 1276
Query 60 TTTAAGCCAGAGAGGTTTTTAGCTTCTT-----TTGGAT-C-AG-GG-C-----AAGA-A 104
|| ||||| ||||||||||||||||||| || || | || || | |||| |
Sbjct 1277 TTCAAGCCGGAGAGGTTTTTAGCTTCTTCAAGATT-AATGCAAGAGGACGAGATAAGAGA 1335
Query 105 G-ATGCACTTAAGTACATTC-CTTTCGGGAGCGGAAGGAGAGGCTGTCCGGGAGTAAATC 162
| | || || ||||||| || ||||||| || |||||||||||||| || |||| ||||
Sbjct 1336 GCAAGCCCTCAAGTACA-TCGCTTTCGGTAGTGGAAGGAGAGGCTGCCCAGGAGCAAATG 1394
Query 163 TGAG-TTACATCTTTGTAGGAACCGCGGTTGGAATGATGGTGCAATGCTTTGACTGGAAA 221
| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1395 T-AGCTTATATCTTTGTAGGAACCGCGATTGGAATGATGGTGCAATGCTTTGACTGGAGA 1453
Query 222 ATCAAAGGAGAAAAGGTTGACATGGAAGAGGCCATTGGAGGACTGAACCTGACCATGGCG 281
||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1454 ATCAATGGAGAAAAGGTTGACATGAAAGAGGCCATTGGAGGACTGAACCTGACCTTGGCT 1513
Query 282 CATCCCCTCAAGTGCATTCCTGTTGCTAGAA-CCCTAAACCCTTT 325
|||||||| ||||||| |||||||||| || ||| ||||| |||
Sbjct 1514 CATCCCCTTAAGTGCACTCCTGTTGCTCGATTCCCAAAACCTTTT 1558
> AT3G20083.1 | Symbols: CYP705A16 | a member of A-type cytochrome
P450 | chr3:7011940-7013625 FORWARD LENGTH=1583
Length=1583
Score = 287 bits (155), Expect = 5e-77
Identities = 285/344 (83%), Gaps = 23/344 (7%)
Strand=Plus/Plus
Query 1 TTGTTGTTAATGCTTATGCTATTATGAGAGATCCTGAT-TCTTGGGAAGATCCTAATGAG 59
|||||||||||| ||||||| | ||||||||||| || || |||||||| ||| | |||
Sbjct 1210 TTGTTGTTAATGGTTATGCTGTGATGAGAGATCCAAATGTC-TGGGAAGAGCCTGAGGAG 1268
Query 60 TTTAAGCCAGAGAGGTTTTTAGCTTCTT-----TT---GG-ATCAG--G-G-CAAGA-AG 105
|||||||| ||||||||| ||||||||| || || | || | | |||| ||
Sbjct 1269 TTTAAGCCGGAGAGGTTTCTAGCTTCTTCAAGATTAAGGGAAGAAGAAGAGATAAGAGAG 1328
Query 106 -ATGCACTTAAGTACATT-CCTTTCGGGAGCGGAAGGAGAGGCTGTCCGGGAGTAAATCT 163
| || || ||||||||| | ||| || |||||||||||||| ||||| ||| |||| |
Sbjct 1329 CAAGCCCTCAAGTACATTGCATTT-GGTAGCGGAAGGAGAGGATGTCCTGGAACAAATAT 1387
Query 164 GAG-TTACATCTTTGTAGGAACCGCGGTTGGAATGATGGTGCAATGCTTTGACTGGAAAA 222
|| || |||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1388 -AGCGTATATCTTTGTAGGAACGGCGATTGGAATGATGGTGCAATGCTTTGACTGGAAAA 1446
Query 223 TCAAAGGAGAAAAGGTTGACATGGAAGAGGCCATTGGAGGACTGAACCTGACCAT-GGCG 281
|||||||||| |||||||||||| |||||||||||||||||||||||||||| || |||
Sbjct 1447 TCAAAGGAGACAAGGTTGACATGAAAGAGGCCATTGGAGGACTGAACCTGAC-ATTGGCT 1505
Query 282 CATCCCCTCAAGTGCATTCCTGTTGCTAGAACCCTAAACCCTTT 325
|||||||| ||||||| |||||||||| || ||| ||| |||||
Sbjct 1506 CATCCCCTTAAGTGCACTCCTGTTGCTCGATCCCCAAAACCTTT 1549
> AT3G20120.1 | Symbols: CYP705A21 | cytochrome P450, family 705,
subfamily A, polypeptide 21 | chr3:7023369-7025923 FORWARD
LENGTH=1687
Length=1687
Score = 217 bits (117), Expect = 7e-56
Identities = 261/327 (80%), Gaps = 24/327 (7%)
Strand=Plus/Plus
Query 4 TTGTTAATGCTTATGCTATTATGAGAGATCCTGA-T-TCTTGGGAAGATCCTAATGAGTT 61
||| ||||||||||| ||| ||||||||||| || | || |||||||| ||| | |||||
Sbjct 1207 TTGGTAATGCTTATGTTATGATGAGAGATCC-GAGTGTC-TGGGAAGACCCTGAGGAGTT 1264
Query 62 TAAGCCAGAGAGGTTTTTAGCTTCTTTTGGAT-----C----AG-GG---CAAGA-AG-A 106
||| || ||||||||| || |||||| ||| | || || |||| || |
Sbjct 1265 TAAACCTGAGAGGTTTCTATCTTCTTCAAGATCAACGCAAGAAGAGGAAAGAAGAGAGCA 1324
Query 107 TGCACTTAAGTACATTCCTTTCGGGAGCGGAAGGAGAGGCTGTCCGGGAGT-AAATCTGA 165
||||||||||||||||||||||| || ||| ||||||||||||| ||| | || ||||
Sbjct 1325 AGCACTTAAGTACATTCCTTTCGGTAGTGGACGGAGAGGCTGTCCTGGA-TCAAGTCTGG 1383
Query 166 GTTACATCTTTGTAGGAACCGCGGTTGGAATGATGGTGCAATGCTTTGACTGGAAAATCA 225
|||| |||||||| || ||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 1384 GTTATATCTTTGTTGGCACCGCAGTTGGAATGATGGTGCAATGCTTTGACTGGAGTATCA 1443
Query 226 AAGGAGAAAAGGTTGACATGGAAGAGGCCATTGGAGGACTGAACCTGACCATGGCGCATC 285
||||||| ||||| | ||||| ||||| | |||||||| ||| ||| ||||| |||
Sbjct 1444 AAGGAGACAAGGTCCAAATGGATGAGGC--T-GGAGGACTAAACTTGAGTATGGCTCATT 1500
Query 286 CCCTCAAGTGCATTCCTGTTGCTAGAA 312
|||| ||||||| ||||||| || |||
Sbjct 1501 CCCTGAAGTGCACTCCTGTTCCTCGAA 1527
> AT5G47990.1 | Symbols: CYP705A5, THAD, THAD1 | cytochrome P450,
family 705, subfamily A, polypeptide 5 | chr5:19434827-19436689
FORWARD LENGTH=1781
Length=1781
Score = 195 bits (105), Expect = 3e-49
Identities = 269/343 (78%), Gaps = 32/343 (9%)
Strand=Plus/Plus
Query 4 TTGTTAATGCTTATGCTATTATGAGAGATCCTGA-TTCTTGGGAAGATCCTAATGAGTTT 62
||||||||| |||||| || |||||||||||||| ||| |||||||| ||| | ||||||
Sbjct 1202 TTGTTAATGTTTATGCGATAATGAGAGATCCTGATTTC-TGGGAAGACCCTGAGGAGTTT 1260
Query 63 AAGCCAGAGAGGTTTTTAGCTTCTT-----TT-GG--ATCAGG--GC-AAGA-AGATG-C 109
||||||||||||||||||||||||| || || | ||| | || | ||| | |
Sbjct 1261 AAGCCAGAGAGGTTTTTAGCTTCTTCAAGATTAGGGGAAGAGGATGAGAAAAGAGAGGAC 1320
Query 110 A--CTTAAGTACATTCCTTTCGGGAGCGGAAGGAGAGGCT-GTCCGGGAGTAA-ATCTGA 165
| || || |||||||||||||| ||||||||||||| || |||| ||| | | |||| |
Sbjct 1321 ATGCTAAAATACATTCCTTTCGGTAGCGGAAGGAGAG-CTTGTCCTGGA-TCACATCT-A 1377
Query 166 G-TTACATCTTTGTAGGAACCGCGGTTGGAATGATGGTGCAATGCTTTGACTGGAAAATC 224
| ||| | | ||||||||| | ||||||||||||||||| ||||||||||| ||||
Sbjct 1378 GCTTATACCGTTGTAGGAAGTGTAATTGGAATGATGGTGCAACACTTTGACTGGATAATC 1437
Query 225 AAAGGAGAAAAGGTTGACATGGAAG-AGGCCATTGGAGGACTGAACCT-GACCATGGCGC 282
||||||||||| | ||||| ||| ||| | ||| | ||| ||| ||||||||| |
Sbjct 1438 AAAGGAGAAAAAATCAACATG-AAGGAGGG--T-GGAACAATGA-CCTTGACCATGGCTC 1492
Query 283 ATCCC-CTCAAGTGCATTCCTGTTGCTAGAACCCTAAACCCTT 324
| ||| || ||||||| ||||||| || ||| ||||||| |||
Sbjct 1493 A-CCCTCTTAAGTGCACTCCTGTTCCTCGAAACCTAAACACTT 1534
> AT2G05180.1 | Symbols: CYP705A6 | cytochrome P450, family 705,
subfamily A, polypeptide 6 | chr2:1875390-1876794 FORWARD
LENGTH=1329
Length=1329
Score = 100 bits (54), Expect = 7e-21
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 9 AATGCTTATGCTATTATGAGAGATCCTGATTCTTGGGAAGATCCTAATGAGTTTAAGCCA 68
|||||||| ||| |||||||||||||||||||||||||||||||| | ||||| ||||||
Sbjct 1207 AATGCTTACGCTGTTATGAGAGATCCTGATTCTTGGGAAGATCCTGACGAGTTCAAGCCA 1266
Query 69 GAGAGGTTT 77
|||||||||
Sbjct 1267 GAGAGGTTT 1275
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 16638624919
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5