BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg929969
Length=1673
Score E
Sequences producing significant alignments: (Bits) Value
AT3G20410.1 | Symbols: CPK9 | calmodulin-domain protein kinase ... 2819 0.0
AT1G50700.1 | Symbols: CPK33 | calcium-dependent protein kinase... 1565 0.0
AT4G35310.1 | Symbols: CPK5, ATCPK5 | calmodulin-domain protein... 219 1e-55
> AT3G20410.1 | Symbols: CPK9 | calmodulin-domain protein kinase
9 | chr3:7116201-7119121 FORWARD LENGTH=2110
Length=2110
Score = 2819 bits (1526), Expect = 0.0
Identities = 1616/1661 (97%), Gaps = 0/1661 (0%)
Strand=Plus/Plus
Query 4 TTTGAGCTTTTTAAAATCATGGGGAATTGTTTTGCCAAGAACCATGGATTGATGAAGCCG 63
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 170 TTTGAGCTTTTTAAAATCATGGGAAATTGTTTTGCCAAGAACCATGGATTGATGAAGCCA 229
Query 64 CAGCAAAATGGGCATACCACTAGATCAGTTGACGTAGGAGTGACCCATCAAGATCCACCG 123
||||||||||| ||||||||||||||||||| |||||||| ||| | ||||||||||||
Sbjct 230 CAGCAAAATGGTAATACCACTAGATCAGTTGAAGTAGGAGTAACCAACCAAGATCCACCG 289
Query 124 TCGTATACTCCACAAGCGAGAAGCACTCAGCAGCCTGAGAAACCAGGTTCCGTGAATAGT 183
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 290 TCGTATACTCCACAAGCGAGAACCACTCAGCAGCCGGAGAAACCAGGTTCCGTGAATAGT 349
Query 184 CAACCACCACCGTGGAGGGCGGCGGCAGCAGCGCCAGGACCAAGTCCCAAGACCACCACT 243
|||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||
Sbjct 350 CAACCACCACCGTGGAGGGCGGCGGCTGCAGCACCAGGACTAAGTCCCAAGACCACCACT 409
Query 244 AAGAGCAATTCAATACTAGAGAACGCTTTCGAAGATGTGAAGCTATTCTACACATTGGGT 303
||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 410 AAGAGCAATTCAATACTAGAGAACGCTTTCGAAGACGTGAAGCTCTTTTACACATTGGGT 469
Query 304 AAAGAGCTAGGTCGTGGGCAATTTGGGGTAACGTATCTGTGCACAGAGAATTCGACGGGG 363
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 470 AAAGAGCTAGGTCGTGGTCAATTTGGGGTAACGTATCTGTGCACAGAGAATTCCACGGGG 529
Query 364 AAGAAGTACGCTTGCAAATCGATCTCAAAGAAGAAGCTGGTGACGAAAGCTGATAAGGAT 423
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 530 AAGAAGTACGCTTGCAAATCGATCTCGAAGAAGAAGCTGGTGACTAAAGCTGATAAGGAT 589
Query 424 GATATGAGGAGAGAGATTCAGATAATGCAGCATTTGAGTGGGCAGCCTAATATAGTGGAG 483
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 590 GATATGAGGAGAGAGATTCAGATAATGCAGCATTTGAGTGGGCAGCCTAATATTGTGGAG 649
Query 484 TTTAAAGGAGCTTATGAGGATGAGAAAGCTGTGAACTTGGTGATGGAGCTTTGTGCTGGT 543
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 650 TTTAAAGGAGCTTATGAGGATGAGAAAGCTGTGAATTTGGTGATGGAGCTTTGTGCTGGT 709
Query 544 GGTGAATTGTTTGATAGAATCATTGCTAAGGGACATTACAGTGAGAGGGCAGCTGCTTCT 603
|||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct 710 GGTGAATTGTTTGATAGAATCATTGCTAAGGGACATTACACTGAGAGAGCTGCTGCTTCT 769
Query 604 GTTTGTAGACAGATTGTGAATGTGGTCAAGATTTGTCATTTCATGGGTGTGTTGCATAGA 663
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 770 GTTTGTAGACAGATTGTGAATGTTGTCAAGATTTGTCATTTCATGGGTGTGTTGCATAGA 829
Query 664 GACTTGAAGCCTGAGAATTTCTTGCTTTCTAGCAAAGATGAGAAGGCTTTGATCAAGGCT 723
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 830 GACTTGAAGCCTGAGAATTTCTTGCTCTCTAGCAAAGATGAGAAGGCTTTGATCAAGGCT 889
Query 724 ACTGATTTCGGCTTGTCTGTCTTCATTGAAGAGGGAAAAGTATATAGAGATATTGTTGGG 783
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 890 ACTGATTTCGGATTGTCTGTCTTTATTGAAGAGGGAAAAGTATATAGAGATATTGTTGGG 949
Query 784 AGTGCATACTATGTTGCTCCAGAAGTCTTACGTCGCAGATATGGGAAAGAAGTTGATATC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 950 AGTGCATACTATGTTGCTCCAGAAGTCTTACGTCGCAGATATGGGAAAGAAGTTGATATC 1009
Query 844 TGGAGTGCTGGAATCATCTTATACATTCTACTCAGCGGTGTGCCCCCGTTTTGGGCTGAA 903
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 TGGAGTGCTGGAATCATCTTATACATTCTACTCAGCGGTGTGCCCCCGTTTTGGGCTGAG 1069
Query 904 ACCGAGAAAGGAATATTTGATGCTATATTGGAAGGCCATATCGACTTTGAGAGCCAACCA 963
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1070 ACTGAGAAAGGAATATTTGATGCTATATTGGAAGGCCATATCGACTTTGAGAGCCAACCA 1129
Query 964 TGGCCGTCAATCTCCAACAGTGCCAAAGATTTGGTACGTAGAATGTTGACTGCGGATCCA 1023
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1130 TGGCCGTCAATCTCCAGCAGTGCCAAAGATTTGGTACGTAGAATGTTGACTGCGGATCCA 1189
Query 1024 AAAAGGCGTATTTCTGCTGCTGATGTTCTTCAACATCCATGGCTTAGAGAAGGTGGAGAA 1083
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1190 AAAAGGCGGATTTCTGCTGCTGATGTTCTTCAGCATCCATGGCTTAGAGAAGGTGGAGAA 1249
Query 1084 GCATCAGACAAGCCAATTGACAGTGCTGTTCTCTCAAGGATGAAACAATTTAGAGCAATG 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250 GCATCAGACAAGCCAATTGACAGTGCTGTTCTCTCAAGGATGAAACAATTTAGAGCAATG 1309
Query 1144 AATAAGCTAAAGAAACTTGCTTTAAAGGTCATAGCGGAGAATATTGACACGGAAGAAATC 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 AATAAGCTAAAGAAACTTGCTTTAAAGGTCATAGCGGAGAATATTGACACGGAAGAAATC 1369
Query 1204 CAAGGATTGAAGGCAATGTTTGCTAACATAGACACAGACAACAGTGGCACAATCACGTAT 1263
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1370 CAAGGATTGAAGGCAATGTTTGCTAACATAGACACTGACAACAGTGGCACAATCACTTAT 1429
Query 1264 GAAGAACTGAAAGAAGGATTAGCCAAATTGGGATCTAAACTCACAGAGGCAGAAGTGAAA 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 GAAGAACTGAAAGAAGGATTAGCCAAATTGGGATCTAAACTCACAGAGGCAGAAGTGAAA 1489
Query 1324 CAGCTCATGGATGCTGCTGATGTTGATGGGAACGGGTCAATCGACTACATAGAGTTTATT 1383
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1490 CAGCTCATGGATGCTGCTGATGTTGATGGGAACGGGTCCATCGACTACATAGAGTTTATT 1549
Query 1384 ACCGCAACAATGCATAGGCACAGGCTTGAAAGTAATGAGAATCTTTACAAAGCTTTCCAG 1443
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 ACAGCAACAATGCATAGGCACAGGCTTGAAAGTAATGAGAATCTTTACAAAGCTTTCCAG 1609
Query 1444 CATTTTGACAAAGACAGCAGCGGATACATTACAATAGACGAATTGGAATCTGCATTGAAG 1503
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1610 CATTTTGACAAAGACAGCAGCGGATACATTACAATAGACGAACTGGAATCTGCATTGAAG 1669
Query 1504 GAATATGGAATGGGAGATGATGCAACAATCAAAGAGGTTCTGTCAGATGTCGACTCGGAT 1563
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1670 GAATATGGAATGGGAGATGATGCAACAATCAAAGAGGTTTTGTCAGATGTCGACTCCGAT 1729
Query 1564 AACGATGGTAGAATCAACTATGAAGAGTTCTGCGCAATGATGAGAAGTGGAAATCCACAA 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1730 AACGATGGTAGAATCAACTATGAAGAGTTCTGCGCAATGATGAGAAGTGGAAATCCACAA 1789
Query 1624 CAACAACAACCGCGGCTGTTCTAGGGGACATTGCTCCTGGA 1664
||||||||||| |||||||||||| |||||||| | |||||
Sbjct 1790 CAACAACAACCTCGGCTGTTCTAGTGGACATTGTTGCTGGA 1830
> AT1G50700.1 | Symbols: CPK33 | calcium-dependent protein kinase
33 | chr1:18781914-18784582 FORWARD LENGTH=2063
Length=2063
Score = 1565 bits (847), Expect = 0.0
Identities = 1210/1385 (87%), Gaps = 26/1385 (2%)
Strand=Plus/Plus
Query 256 ATACTAGAGAACG-CTTTCGAAGATGTGAAGCTATTCTACACATTGGGTAAAGAGCTAGG 314
||||| ||||| | | | |||||| ||||| || |||||||| ||| | ||||| | ||
Sbjct 481 ATACTCGAGAA-GCCGTACGAAGACGTGAAACTGTTCTACACTTTGAGCAAAGAATTGGG 539
Query 315 TCGTGGGCAATTTGGGGTAACGTATCTGTGCACAGAGAATTCGACGGGGAAGAAG-TACG 373
||| || || ||||| ||||||||||||||||||||||| |||||||||||| || | ||
Sbjct 540 TCGAGGCCAGTTTGGAGTAACGTATCTGTGCACAGAGAAGTCGACGGGGAAG-AGATTCG 598
Query 374 CTTGCAAATCGATCTCAAAGAAGAAGCTGGTGACGAAAGCTGATAAGGATGATATGAGGA 433
||||||| ||||| || |||||||| || |||||||||| |||||| || ||||||||||
Sbjct 599 CTTGCAAGTCGATTTCCAAGAAGAAACTTGTGACGAAAGGTGATAAAGAAGATATGAGGA 658
Query 434 GAGAGATTCAGATAATGCAGCATTTGAGTGGGCAGCCTAATATAGTGGAGTTTAAAGGAG 493
||||||||||||| ||||||||||||||||| || ||||| || || |||||||||||||
Sbjct 659 GAGAGATTCAGATTATGCAGCATTTGAGTGGACAACCTAACATTGTTGAGTTTAAAGGAG 718
Query 494 CTTATGAGGATGAGAAAGCTGTGAACTTGGTGATGGAGCTTTGTGCTGGTGGTGAATTGT 553
||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 719 CTTATGAAGATGAGAAAGCTGTGAATTTGGTTATGGAGCTTTGTGCTGGTGGTGAATTGT 778
Query 554 TTGATAGAATCATT-GCTAAGGGACATTACAGTGAGAGGGCAGCTGCTTCTGTTTGTAGA 612
| ||||| || || || |||||||||||||||||||| |||||||||||||||||||||
Sbjct 779 TCGATAGGAT-TTTAGCAAAGGGACATTACAGTGAGAGAGCAGCTGCTTCTGTTTGTAGA 837
Query 613 CAGATTGTGAATGTGGTCAAGATTTGTCATTTCATGGGTGTGTTGCATAGAGACTTGAAG 672
|||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct 838 CAGATTGTTAATGTTGTCAATATTTGTCATTTCATGGGTGTGATGCATAGAGACTTAAAG 897
Query 673 CCTGAGAATTTCTTGCTT-TCTAGCAAAGATGAGAAGGCT-TTGATCAAGGCTACTGATT 730
||||||||||||||| || ||||||||||||||||||||| || ||||| || |||||||
Sbjct 898 CCTGAGAATTTCTTG-TTATCTAGCAAAGATGAGAAGGCTCTT-ATCAAAGCCACTGATT 955
Query 731 TCGGCTTGTCTGTCTTCATTGAAGA-GGGAAAAGTATATAGAGATATTGTTGGGAGTGCA 789
|||| || || ||||| || ||||| |||| | || |||| |||||| ||||||||||||
Sbjct 956 TCGGATTATCAGTCTTTATCGAAGAAGGGAGA-GTGTATAAAGATATAGTTGGGAGTGCA 1014
Query 790 TACTATGTTGCTCCAGAAGTCTT-ACGTCGCAGATATGGGAAAGAAGTTGATATCTGGAG 848
|| ||||||||||| ||||| || | | || |||||||| |||||| | ||||| |||||
Sbjct 1015 TATTATGTTGCTCCTGAAGTTTTGAAG-CGGAGATATGGTAAAGAAATCGATATATGGAG 1073
Query 849 TGCTGGAATCAT-CTTATACATTCTACTCAGCGGTGTGCCCCCGTTTTGGGCTGAAACCG 907
||||||||| || || |||||||||||| || |||||||| ||||||||||||||||| |
Sbjct 1074 TGCTGGAATTATACT-ATACATTCTACTTAGTGGTGTGCCTCCGTTTTGGGCTGAAACGG 1132
Query 908 AGAAAGGAATATTTGATGCTATATTGGAAGGCCATATCGACTTTGAGAGCC-AACCATGG 966
||||||| ||||||||||||||||||||||| | ||||||||||| | || |||| |||
Sbjct 1133 AGAAAGGGATATTTGATGCTATATTGGAAGGTGAAATCGACTTTGA-ATCCCAACCTTGG 1191
Query 967 CCGTCAATCTCCAACAGTGCCAAAGATTTGGTACGTAGAATGTTGACTGCG-GATCCAAA 1025
|| ||||| ||||| ||||| |||||||||||||||||||||||||| | ||||| ||
Sbjct 1192 CCCTCAATTTCCAATAGTGCTAAAGATTTGGTACGTAGAATGTTGACA-CAAGATCCGAA 1250
Query 1026 AAGGCGTATTTCTGCTGCTGATGTTCTTCAA-CATCCATGGCTTAGAGAAGGTGGAGAAG 1084
||| || |||||||||||||| |||||| || ||||||||||| ||||||||||||||||
Sbjct 1251 AAGACGGATTTCTGCTGCTGAAGTTCTT-AAGCATCCATGGCTAAGAGAAGGTGGAGAAG 1309
Query 1085 CATCAGACAAGCCAATTGACAGTGCTGTTCTCTCAAGGATGAAACAATTTAGAGCAATGA 1144
|||| || ||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1310 CATCGGATAAGCCTATTGATAGTGCTGTTCTCTCAAGGATGAAGCAATTTAGAGCGATGA 1369
Query 1145 ATAAGCTAAAGAAACTTGCTTTAAAGGTCATAGCGGAGAATATTGACACGGAAGAAATCC 1204
|||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 1370 ATAAACTAAAGAAACTTGCTTTAAAGGTCATTGCGGAGAACATTGACACGGAAGAAATAC 1429
Query 1205 AAGGATTGAAGGCAATGTTTGCTAACATAGACACAGACAACAGTGGCACAATCACGTATG 1264
|||| || ||||| ||||||||||| ||||| |||||||| ||||| || ||||| || |
Sbjct 1430 AAGGCTTAAAGGCGATGTTTGCTAATATAGATACAGACAATAGTGGTACTATCACATACG 1489
Query 1265 AAGAACTGAAAGAAGGATTAGCCAAATTGGGATCTAA-ACTCACAGAGGCAGAAGTGAAA 1323
||||| |||||||||||||||||||| ||||||| || |||||| || || |||||||||
Sbjct 1490 AAGAATTGAAAGAAGGATTAGCCAAACTGGGATC-AAGACTCACTGAAGCTGAAGTGAAA 1548
Query 1324 CAGCTCATGGATGCTGCTGATGTTGATGGGAACGGGTCAATCGACTACATAGAGTTTATT 1383
|||||||||||||||||||| |||||||| || |||||||| || ||||| |||||||||
Sbjct 1549 CAGCTCATGGATGCTGCTGACGTTGATGGAAATGGGTCAATAGATTACATTGAGTTTATT 1608
Query 1384 ACCGCAACAATGCATAGGCACAGGCTTGAAAGTAATGAGAATC-TTTACAAAGCTTTCCA 1442
|| |||||||||||||| || |||||||||||||||||||| | |||||||||| |||||
Sbjct 1609 ACTGCAACAATGCATAGACATAGGCTTGAAAGTAATGAGAA-CGTTTACAAAGCCTTCCA 1667
Query 1443 GCATTTTGACAAAGACAGCAGCGGATACATTACAATAGACGAATTGGAATCTGCATTGAA 1502
|||||||||||||| | || ||||||||||| | |||||| | || |||| |||||
Sbjct 1668 ACATTTTGACAAAGATGGGAGTGGATACATTACGACAGACGAGCTAGAGGCTGCTTTGAA 1727
Query 1503 GGAATATGGAATGGGAGATGATGCAACAATCAAAGAGGTTCTGTCAGATGTCGACTCGGA 1562
|||||||||||||||||||||||| || ||||||||| || |||| ||||||||| | ||
Sbjct 1728 GGAATATGGAATGGGAGATGATGCTACTATCAAAGAGATTTTGTCTGATGTCGACGCTGA 1787
Query 1563 TAACGATGGTAGAATCAACTATGAAGAGTTCTGCGCAATGATGAGAAGTGGAAATCCACA 1622
||| || ||||||||||||||||| ||||| || || |||||||||||||| ||||||||
Sbjct 1788 TAATGACGGTAGAATCAACTATGACGAGTTTTGTGCTATGATGAGAAGTGGGAATCCACA 1847
Query 1623 ACAAC 1627
|||||
Sbjct 1848 ACAAC 1852
> AT4G35310.1 | Symbols: CPK5, ATCPK5 | calmodulin-domain protein
kinase 5 | chr4:16801987-16804995 FORWARD LENGTH=2263
Length=2263
Score = 219 bits (118), Expect = 1e-55
Identities = 536/731 (73%), Gaps = 56/731 (8%)
Strand=Plus/Plus
Query 308 AGCTAGGTCGTGGGCAATTTGGGGTAACGTATCTGTGCACAGAGAATT-CGAC-GGGGAA 365
||||||||| || |||||||| || ||||| || |||||| ||| | | || |
Sbjct 530 AGCTAGGTCAAGGTCAATTTGGAACGACTTATCTATGTACAGAG-ATTGCCTCAGGCGTT 588
Query 366 GAAGTACGCTTGCAAATCGATCTCAAAGAAGAAGCTGGTGACGAAAGCTGATAAGGATGA 425
| | |||||||| || || || || |||| |||| || | | |||| ||| || ||
Sbjct 589 G-ACTACGCTTGTAAGTCAATATCCAAGAGGAAGTTGATCTCTAAAGAAGATGTTGAGGA 647
Query 426 TATGAGGAGAGAGATTCAGATAATGCAGCATTTGAG-TGGGCAGC-CTAATATAGTGGA- 482
| | || || ||||||||||||||||| ||||| || ||| || | || ||| || ||
Sbjct 648 TGTTAGAAGGGAGATTCAGATAATGCATCATTT-AGCTGGTCA-CGGTAGTATCGT-GAC 704
Query 483 GTTTAAAGGAGCTTATGAGGATGAGAAAG-CTGTGAAC-TTGGTGATGGAGCTTTGTGCT 540
| ||||||||||||||||||| | ||| || || || |||||||||||||||
Sbjct 705 GATTAAAGGAGCTTATGAGGA-CTCTTTGTATGTTCACATT-GTTATGGAGCTTTGTGCT 762
Query 541 GGTGGTGAATTGTTTGATAGAATCATTGCTA-AG-GGACATTACAGTGAGAGGGCAGCTG 598
|| ||||||||||||||||| || ||| | | || |||||||| ||||||||| |||||
Sbjct 763 GGAGGTGAATTGTTTGATAGGATTATT-C-AGAGAGGACATTATAGTGAGAGGAAAGCTG 820
Query 599 CT--TCTGTTTGTAGACAGATTGT-GAATG-TGGTCAAGATTTGTCATTTC-ATGGGTGT 653
|| ||| | ||| ||||| | || || | ||| ||||| ||| | |||||
Sbjct 821 CTGAGCTGACT-AAGA-TCATTGTCG-GTGTTGTTGAAG-CGTGTCA-TTCGCTTGGTGT 875
Query 654 GTTGCATAGAGACTTGAAGCCTGAGAATTTCTTGCTTTCT-AGCAAAGATGA-GAAGGCT 711
| ||||||||||||||||||||||||||||||| || | | || ||||| || ||
Sbjct 876 GATGCATAGAGACTTGAAGCCTGAGAATTTCTTA-TTGGTTAATAAGGATGATGATTTCT 934
Query 712 TTGATCAAGGCTACTGATTTCGG-CTTGTCTGTCTTCATTGAAG--AGGGAAAAGTATAT 768
| ||||||||| |||||| || || |||||||| || || ||| ||| ||| |
Sbjct 935 CTC-TCAAGGCTATTGATTTTGGGCTA-TCTGTCTTT-TTCAAACCAGGTCAAA-TAT-T 989
Query 769 -AGAGATATTGTTGGGAGTGCATACTATGTTGCTCCAGAAGTCTTACGTCGCA-GATATG 826
| ||| ||||||| ||| |||| ||||||||||| || || || | || | | ||||
Sbjct 990 CACTGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAGGTTTTGC-TCAAACGTTATG 1048
Query 827 GGAAAGAAGTTGATATCTGGAGTGCTGGAATCATCTTATACAT-TCTACTCAGCGGTGTG 885
|| |||| |||| | |||| |||||| | || || || || | | || ||||| ||
Sbjct 1049 GGCCTGAAGCTGATGTGTGGACTGCTGGTGTTATATTGTATATAT-TGCTAAGCGGAGT- 1106
Query 886 CCC-CCGTTT-TGGGCTGAAAC-CGAGAAAGGAATATTTGATGCTATATTGGAAGGCCAT 942
||| || ||| ||||| ||||| | || |||| |||||||||||| | ||| |||| ||
Sbjct 1107 CCCACC-TTTCTGGGCAGAAACAC-AGCAAGGGATATTTGATGCTGTGTTGAAAGGATAT 1164
Query 943 ATCGACTTTGAGAGCCA-ACCA-TGGCC-GTCAATCTCCAACAGTGCCAAAGATTTGGTA 999
|||||||||||| | | ||| ||||| || | | ||| ||||||| ||||| ||| |
Sbjct 1165 ATCGACTTTGAGT-C-AGACCCGTGGCCTGTGA-TATCCGACAGTGCTAAAGACTTGATC 1221
Query 1000 CGTAGAATGTT 1010
|| ||||||||
Sbjct 1222 CGCAGAATGTT 1232
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82680297615
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5