BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930018 Length=1136 Score E Sequences producing significant alignments: (Bits) Value AT3G20705.1 | Symbols: | pseudogene, hypothetical protein | ch... 656 0.0 AT3G20690.1 | Symbols: | F-box and associated interaction doma... 499 2e-140 AT3G20700.1 | Symbols: | F-box associated ubiquitination effec... 453 2e-126 AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-7... 440 1e-122 AT3G17320.1 | Symbols: | F-box and associated interaction doma... 69.4 7e-11 AT3G49980.1 | Symbols: | F-box and associated interaction doma... 56.5 5e-07 AT3G18900.2 | Symbols: | FUNCTIONS IN: molecular_function unkn... 52.8 7e-06 > AT3G20705.1 | Symbols: | pseudogene, hypothetical protein | chr3:7235948-7237084 REVERSE LENGTH=1137 Length=1137 Score = 656 bits (355), Expect = 0.0 Identities = 904/1153 (78%), Gaps = 101/1153 (9%) Strand=Plus/Plus Query 25 ATGATGTCCAATCTTCCACGTGATTTGGTGGAGGAGATTCTCTCTAGGGTT-CCGTTGAC 83 |||||||| ||||||||| ||||||||| ||||||||||||||||||||| | | |||| Sbjct 1 ATGATGTCAAATCTTCCAAATGATTTGGTTGAGGAGATTCTCTCTAGGGTTACTG-TGAC 59 Query 84 ATCTT-TGA-AATCAGTGCGATCTACTTGCAAAAAGTGGAACGCTTTAACCAAATATCAG 141 | || ||| || |||||||||||| |||||||||||||||||||||||||||| || || Sbjct 60 GT-TTATGAGAA-CAGTGCGATCTATTTGCAAAAAGTGGAACGCTTTAACCAAAGAT-AG 116 Query 142 -AGTTTTACAAATAAGCACATCCGCAATGTAGCAAG-ATCAGGGGAAAGAGAGTTTCTGA 199 || |||||||||||| ||||||||||| |||| | || |||||||||||||||||||| Sbjct 117 GAGCTTTACAAATAAGTACATCCGCAATATAGCC-GCATTAGGGGAAAGAGAGTTTCTGA 175 Query 200 TCATGATCATGGAGTATAG-AGCTTATTTGATTGGCGTCAATCTCCATGGAATTCAAAAC 258 | ||||| ||| | ||| | ||||||| | ||||||||||||||||| ||||||||| Sbjct 176 T---GATCAAGGAATTTAGTAT-TTATTTGGTAGGCGTCAATCTCCATGGTATTCAAAAC 231 Query 259 AACAACATTGATCTATCTATA-AAGCAAAAAGGTAAACTTATCAGCCTAGACTATTCAGA 317 |||||| ||||||| |||||| || | |||||||||||||| ||| | ||| || || | Sbjct 232 AACAACTTTGATCTCTCTATAGAA-CTTAAAGGTAAACTTATTAGCATGGACAATACA-A 289 Query 318 T--GAAGAATATCGTACATCTCATTCTCAGGTCTTTCACTGCCATGGTTTATTGTTAT-T 374 | | ||| | | ||| |||||| | ||||||||||| |||| ||||| |||| | Sbjct 290 TTCGGAGATTCT-GTATATCTCAA----A--TCTTTCACTGCAATGGCTTATTTTTATGT 342 Query 375 CGT---A-AAC--GCCACG-A-----G-CTTAGTGGTTTGGAACCCGTATCGGGGGAAAC 421 || | || | || | | | ||| |||||||||||||||||| | ||||| Sbjct 343 -GTTTCACAAAAAGACATGGATAATAGGCTT-GTGGTTTGGAACCCGTATTGTTCGAAAC 400 Query 422 CAAAATACATCAAACGCGGGTATG-TGC-A--ACTAG--GA-ATGTTCGCTTTCGGATAC 474 ||| || ||||||| | | ||| | | || || || | ||| ||| ||||||| Sbjct 401 CAAGATGGATCAAACCCAGTTATAATTATAGGAC-AGTTGACAGGTTTGCTCTCGGATAT 459 Query 475 GACAAATCCTGCGGTAGCCACAAAATATTGAGGCTTTTCGGTCATTACCTAAATAACATC 534 |||||||| || |||||||||||||| ||||||||||| ||| || ||||||||||| || Sbjct 460 GACAAATCATGTGGTAGCCACAAAATCTTGAGGCTTTTTGGTGATAACCTAAATAACCTC 519 Query 535 GAAATCTATGATTTGAGCTCTAATTCATGGATGGTTCCGAGTGGCAATCTTGAATGGGGT 594 |||||||| ||||||||||| |||||||||| |||||| | || || ||||||| ||| | Sbjct 520 GAAATCTACGATTTGAGCTCGAATTCATGGAGGGTTCCTAATGTCACTCTTGAACGGGAT 579 Query 595 AT-GATGTATATGCGAGATGGCGTGTCTTTGAAGGGAAATACTTACTGGTGTGGTA-AGG 652 || | | ||||||| | ||||||||||||||| | ||| |||||||||| || || || Sbjct 580 ATAG-TATATATGCAACCTGGCGTGTCTTTGAAAGAAAAGACTTACTGGTATGCTAGAG- 637 Query 653 ATAAGGAATCAGTAGATT-ATCATTTACTCTGTTTTGATTTTACAAGAGAGAGGTTTGGA 711 |||| ||||||| | ||| || | || | | ||||||||||||||||||||| |||||| Sbjct 638 ATAAAGAATCAGAAAATTGAT-ACTTGTTTTATTTTGATTTTACAAGAGAGAGATTTGGA 696 Query 712 CCGCGTCTGC-TTCTGCCCATCAAAGGATTTG-ATG--G-GTCTCTATCTGCAGTTAAAG 766 |||||||||| || ||||| ||| | ||||| ||| | ||||||||||| || |||| Sbjct 697 CCGCGTCTGCCTT-TGCCCTTCAT-GAATTTGGATGATGTGTCTCTATCTGTGGTCAAAG 754 Query 767 AAGAGCAGCTAGC-AGTGTTAATTAA-GCGGTATGATATATCTGCGATAGAGATTTGGGT 824 ||||| |||| || | ||||| |||| ||||| |||| || || | | ||||||||||| Sbjct 755 AAGAGAAGCTTGCGA-TGTTA-TTAAAGCGGTGGGATACATGTGAGGTGGAGATTTGGGT 812 Query 825 TACGAACAAGATTGAGCCTGATGCGGTGTCGTGGAACATCTTCTTAAAATTTGATATGAA 884 ||| ||||||||||||| |||| ||||||||| || ||||||||| ||| ||| || Sbjct 813 GACGGACAAGATTGAGCCCGATG---TGTCGTGGAGCAAGTTCTTAAAAGTTGGTATTAA 869 Query 885 -CCTATGTGATT-ATGCTGCGAATTTC-T--TGATTGACGAGGAGATA-AAAGTCGCAGT 938 || | || || || ||| |||||| | ||||||| | || || | ||||||||| | Sbjct 870 ACC-ACGTT-TTGATTTTGCAAATTTCGTCGTGATTGATGTGGTGA-AGAAAGTCGCATT 926 Query 939 GGTTTTTGATACAGTCAGGGCATGGGGGAGTCCTAAACTCACACTCACTTACACCGACAT 998 ||||||||||| | || |||| | | ||| | || | ||| | | ||| |||| Sbjct 927 GGTTTTTGATAAAAACAAGGCA-GAGA-AGTT-TCAA-T-ACAGT---T-ACA---ACAT 974 Query 999 AGCTTACATCATTGGAGAGAATGGTTGTTTTAGAAGA-GTGGATCTCCGTAAATCTCGAT 1057 |||||||||||| |||||||| |||| || |||| || ||||||||| || |||||| || Sbjct 975 AGCTTACATCATCGGAGAGAAAGGTTATTGTAGA-GAAGTGGATCTCGGTGAATCTCCAT 1033 Query 1058 ACCCATCACCTCGTCC-A-CTTGCTTGCTCTTATGTTCCAAGTT-CTGTGCAAATCAAGT 1114 || | ||| | ||| | ||||| ||||||||||||||||||| | |||||| || ||| Sbjct 1034 ACACGCCACTT--TCCTATCTTGCGTGCTCTTATGTTCCAAGTTAC-GTGCAACTCGAGT 1090 Query 1115 AAAACAAGATTAT 1127 ||| || |||||| Sbjct 1091 AAACCA-GATTAT 1102 > AT3G20690.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:7231570-7232682 REVERSE LENGTH=1113 Length=1113 Score = 499 bits (270), Expect = 2e-140 Identities = 875/1150 (76%), Gaps = 110/1150 (10%) Strand=Plus/Plus Query 22 ATGATGATGTCCAATCTTCCACGTGATTTGGTGGAGGAGATTCTCTCTAGGGTTCCGTTG 81 |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct 1 ATGATGATGTCCGATCTTCCACATGATTTGGTGGAGGAGATTCTCTCTAGGCTTCCGTTG 60 Query 82 ACATCTTTGAAATCAGTGCGATCTACTTGCAAAAAGTGGAACGCTT-TAACCAAATATCA 140 | |||||| ||| || |||||||||||||||||| ||||||| || || ||||| ||| Sbjct 61 ATATCTTTAAAAGCAATGCGATCTACTTGCAAAACCTGGAACG-TTCTATCCAAACATCG 119 Query 141 GAGTTTTACAAATAAGCACATCCGCAATGTAGCAAG-ATCAGGGGAAAGAGAGTTTCTGA 199 ||| ||| |||||||||||||| |||||||| | | ||||||| ||||||| ||| || Sbjct 120 GAGCTTTGCAAATAAGCACATCGGCAATGTAACC-GCATCAGGGAAAAGAGA-TTT--GA 175 Query 200 TCATGATCATGGAGTATAGAGCTT-ATTTGATTGGCGTCAATCTCCATGGAATTCA-AA- 256 | ||||| | || | || || || ||| |||||||||||||||||||| ||||| || Sbjct 176 TAATGATTAAAGATTGTA-AGGTTTATTCAATTGGCGTCAATCTCCATGGTATTCAGAAC 234 Query 257 A-CAACAACATT---GATCTATCTATAAAGCAA-AAAGGTAAACTTATCAGCCTAGACTA 311 | |||||||||| ||||||||||||||| || ||||||| ||| || |||||| | Sbjct 235 AACAACAACATTATTGATCTATCTATAAAG-AATAAAGGTATTCTT--CA-CCTAGAAAA 290 Query 312 TTCAGATG-AAGAAT-ATCGTACATCTCATTCTCAGGTCTTTCACTGCCATGGTTTATTG 369 || |||| || | | | | | || |||| | |||||||||||| | ||||||||| Sbjct 291 TTTAGATCTAATATTCAAGGAA-AT---ATTCA-ATGTCTTTCACTGCAACGGTTTATTG 345 Query 370 TTATT---CGTAAACGCCAC-GA-GCT--TAGT-GG-TT-TGG-----AACCCGTATCGG 414 || || || || | ||| || | | || | || || ||| ||||||||| || Sbjct 346 TTGTTATACGGAAGCATCACTGATGATAGTATTAGGCTTGTGGTTTGTAACCCGTATTGG 405 Query 415 GGGAAACCAAAATACATCAAACGCGGG--TA-TGT-GCAACTAG-GA-ATG-TTCGCTTT 467 ||||||| ||| |||||||| || | | |||| | || | || ||||| Sbjct 406 GGGAAACGTGAATGGGTCAAACGCATAAATAATTTTGCAAGTTTTGACAAACTT-GCTTT 464 Query 468 CGGATACGACAAATCCTGCGGTAGCCACAAAATATTGAGGCTTTTCGGTCA-TTACC-TA 525 ||||||||||||||| || ||| |||||||||| || ||| |||||| | | ||||| || Sbjct 465 CGGATACGACAAATCTTGTGGTTGCCACAAAATCTTAAGGGTTTTCGAT-AGTTACCCTA 523 Query 526 AATA-ACATCGAAATCTATGATTTGAGCTCTAATTCATGGATGGTTCCGAGTGGCAATCT 584 | || || | |||||||| ||||||| ||||||||| |||||||| | ||| | ||| Sbjct 524 A-TAGACTT-GAAATCTACAATTTGAGGTCTAATTCACGGATGGTTTCTAGTTTCCCTCT 581 Query 585 TGAATGGGGTAT-GATGTATATGCGAGATGGCGTGTCTTTGAAGGGAAATACTTACTGGT 643 | |||||| ||| | || ||||| ||||||||||||||||||||||||||||||||||| Sbjct 582 TAAATGGGATATAGC-GTTTATGCAAGATGGCGTGTCTTTGAAGGGAAATACTTACTGGT 640 Query 644 GTGGTAAGGATA-AGGAATCAGTAGATTATCATTTACTCTGTTTTGATTTTACAAGAGAG 702 || ||| |||| | || |||| ||||| | ||||| | || ||||||||||| |||||| Sbjct 641 ATGCTAAAGATAGAAGA-TCAGAAGATTGTTATTTAATATGCTTTGATTTTACTAGAGAG 699 Query 703 AGGTTTGGACCGCGTCTGCTTCTGCC-CA----T-CAAAG--GA-TTTGATGGGTC-TCT 752 || || ||||||||||||| ||| || || | || | || ||| |||| ||| Sbjct 700 AGATTCGGACCGCGTCTGCCTCTACCTCAACCCTTCATCGATGAATTTT-TGGGGAGTCT 758 Query 753 ATCTGCAGTTAA-AGAAGAGCAGCTAGCAGTGTTAATTAAGCGGTAT-GA--T---ATAT 805 || || || || ||||||| |||| || |||||| | ||||||| | | | || Sbjct 759 ATATGTGGT-AAGAGAAGAGAAGCTTGCGGTGTTAGTAAAGCGGTGGCGGGGTGGCAAAT 817 Query 806 CTGCGATAGAGATTTGGGTTACGAACAAGATTGAGCCTGATGCGGTGTCGTGGAACATCT 865 ||| ||| || |||||||||||||||||||||||||| |||| || ||||||| || | Sbjct 818 CTGAGATCGATATTTGGGTTACGAACAAGATTGAGCCCGATGAAGTCTCGTGGAGCAAGT 877 Query 866 TCTTAAAATTTGATATGA-ACCTATG-TGATTA-TG-CTGCGA-ATTTCTTGATTGACGA 920 |||||||| |||||| | ||| | | | || || ||| | || ||||||| | || Sbjct 878 TCTTAAAAGTTGATAACACACCAA-GATTTTTTCTGACTGAGGGATA-CTTGATTTATGA 935 Query 921 GGA-GATAAAAGTCGCAGTGGTTTTTGATACAGTCAGG-G-CATG-GGGGAGTCCTAAAC 976 || || ||| |||| |||| ||||| ||| || ||| | || | |||| || ||| Sbjct 936 TGAAGAGAAA-GTCGTAGTGTTTTTTAATAAAG--AGGAGACA-GAGGGGC-TC--AAA- 987 Query 977 TCACACTCACTTACACCGACATAGCTTACATCATTGGAGAGAATGGTTGTTTTAGAAGAG 1036 || |||| | | | |||||||||||||| ||||||||||||||| ||| ||||||| Sbjct 988 TC-CACTG--T--C-C--ACATAGCTTACATCGTTGGAGAGAATGGTTATTTCAGAAGAG 1039 Query 1037 TGGATCTCCGTAAATCTCGATACCCATCACCTCGTCCA-CTTGCT-TGCTCTTATGTTCC 1094 |||||||||| || ||| ||| | | ||| | | || |||| | ||||||||||| || Sbjct 1040 CGGATCTCCGTGAACCTCTATATCAACCACTTTG-CCGTCTTG-TGTGCTCTTATGTACC 1097 Query 1095 AAGTTCTGTG 1104 |||||||||| Sbjct 1098 AAGTTCTGTG 1107 > AT3G20700.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:7233525-7234505 REVERSE LENGTH=981 Length=981 Score = 453 bits (245), Expect = 2e-126 Identities = 692/897 (77%), Gaps = 74/897 (8%) Strand=Plus/Plus Query 257 ACAACAACATTGATCTATCTATAAAGCAAAAAGGTAAACTTATCAGCCTAGACTATTCAG 316 |||||||||||||||||||||||||| | ||||| |||||| ||| |||| | ||| Sbjct 122 ACAACAACATTGATCTATCTATAAAGTGTAGAGGTAGACTTATTAGCAGAGACGAAACAG 181 Query 317 ATGAAGAATATCGTACATCTCATTCTCAGGTCTTTCACTGCCATGGTTTATTGTTA---- 372 | | | || || | || | ||||| |||||||||||| |||||||||||||| Sbjct 182 CTCAGGGAT-TC-T--ATGT--GTCTCAAGTCTTTCACTGCAATGGTTTATTGTTATCCG 235 Query 373 T-TC--G-TAAAC-------GCCACGA-GCTTAGTGGTTTGGAACCCGTATCGGGG-GAA 419 | || | |||| | ||| | |||| |||||||| ||||||||| |||| || Sbjct 236 TATCAGGAAAAACTATTGATGACACTAGGCTT-GTGGTTTGTAACCCGTAT-GGGGTAAA 293 Query 420 ACCAAAATACATCAAACGC--GGGT-A-T--GTGCA-ACTAGGA-ATGTTCGCTTTCGGA 471 |||||||| ||||| | | | | | | | | | | || || || || || ||||| Sbjct 294 ACCAAAATGGATCAATCCCAAAGATAATTACG-GGAGATTA-GACATATTTTCTCTCGGA 351 Query 472 TACGACAAATCCTGCGGTAGCCACAAAATATTGAGGCTTTTCGGTCATTACCTA-AAT-A 529 | ||||||| ||||||||| ||||||| |||||| ||| | | ||| | | ||| | Sbjct 352 TTTGACAAATTATGCGGTAGCTACAAAATCTTGAGGATTTAC-G--ATT-TCGATAATAA 407 Query 530 ACATCGAAATCTATGATTTGAGCTCTAATTCATGGATGGTTCCGAGTGGCAATCTTGAAT 589 || || ||||||| |||||||||||||||||||||||| |||| || | || ||||| | Sbjct 408 AC-TCCAAATCTACGATTTGAGCTCTAATTCATGGATGATTCCAAGAGACACTCTTGGAC 466 Query 590 GGGGTAT-GATGTATATGCGAGATGGCGTGTCTTTGAAGGGAAATACTTACTGGTGTGGT 648 ||| ||| || |||||||| | |||||||||||| |||| ||||||||| ||||||| | Sbjct 467 GGGATATAGA-GTATATGCAAAATGGCGTGTCTTCCAAGGAAAATACTTATTGGTGTGCT 525 Query 649 AAG-GATAAGGAATCAGTAGATTATCATTTACTCTGTTTTGATTTTACAAGAGAGAGGTT 707 || ||||| ||||| | ||| | ||| ||||||||||||||||||| ||||| || Sbjct 526 -AGAGATAAACAATCACAATATTGTTTTTTGTTCTGTTTTGATTTTACAAGGGAGAGATT 584 Query 708 TGGACCGCGTCTGCTTCTGCCCATCAAAGGA-TTTGATGGGTCTCTATCTGCAGTTAAAG 766 ||||||||||| | |||||| |||| ||| || ||| |||||||||||| ||||||| Sbjct 585 CGGACCGCGTCTACCACTGCCCTTCAATGGAGCTT-ATGTGTCTCTATCTGCGGTTAAAG 643 Query 767 AAGAGCAGCTAGCAGTGTTAATTAAGCGGTATGATATATCTGCGATAGAGATTTGGGTTA 826 |||||||||| ||||||||| || ||| | |||| ||||| ||||||||||||||||| Sbjct 644 AAGAGCAGCTTGCAGTGTTATTTCAGCCATCGGATAAATCTGAGATAGAGATTTGGGTTA 703 Query 827 CGAACAAGATTGAGCCTGATGCGGTGTCGTGGAACATCTTCTTAAAATTTGATATGAACC 886 ||||||||||||||||||| | |||||||||| | ||||||| ||| |||| ||||| | Sbjct 704 CGAACAAGATTGAGCCTGAAGAAGTGTCGTGGAGCGTCTTCTTGAAAGTTGAAATGAAAC 763 Query 887 TATGTGATTATG-CT-GCGAATTTCTTGATTGACGAGGAGATA-AAAGTCGCAGTGGTTT 943 || ||| || || || | |||||||||||||||| |||| | | ||| ||||||| |||| Sbjct 764 TACGTG-TTCTGTCTTG-GAATTTCTTGATTGACAAGGAAA-AGAAATTCGCAGTTGTTT 820 Query 944 TTGATACAGTCAGGGCATGGGGGAGTCCTAAACTCACACTCACTTACACCGACATAGCTT 1003 |||||| || || |||| |||| | |||| | || | |||| |||||||||| Sbjct 821 TTGATAAAGACAAGGCAAAGGGGT-T--TAAAA-C-CA---A-TTAC---GACATAGCTT 868 Query 1004 ACATCATTGGAGAGAATGGTTGTTTTAGAAGAGTGGATCTCCGTAAATCTCGATACCCAT 1063 || |||||||||| ||||||| || |||||||||||||||||| |||||| | || | Sbjct 869 ACGTCATTGGAGAAAATGGTTATTACAGAAGAGTGGATCTCCGTGAATCTCCAAACAAAC 928 Query 1064 CACCTCGTCC--ACT-TG-CTTGCTCTTATGTTCCAAGTTCTGTGCAAATCAAGTAA 1116 ||| | | || | | || |||| | | |||||||||||| |||||||||| ||||| Sbjct 929 CACTTTG-CCGTATTGTGTCTTG-T-T-ATGTTCCAAGTTGTGTGCAAATCGAGTAA 981 > AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-7238999 REVERSE LENGTH=1089 Length=1089 Score = 440 bits (238), Expect = 1e-122 Identities = 854/1133 (75%), Gaps = 116/1133 (10%) Strand=Plus/Plus Query 22 ATGATGATGTCCAATCTTCC-ACGTGATTTGGTGGAGGAGATTCTCTCTAGGGTTCCGTT 80 ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||| Sbjct 1 ATGATGATGTCAAATCTTCCAAAG-GATTTGGTGGAGGAGATTCTCTCTAGGGTTCCGTT 59 Query 81 GACAT-CTTTGAAATCAGTGCGATCTACTTGCAAAAAGTGGAACGCTTTAACCAAATATC 139 | || | | || | || | ||||||||||||||||| ||| ||| |||| | ||| ||| Sbjct 60 TAAATACCT-GAGAGCAATACGATCTACTTGCAAAAATTGGTACGATTTATCAAAAAATC 118 Query 140 AGAGTTTTACAAATAAGCACATCCG-CAATGTAGCAAG-ATCAGGGGAAAGAGAGTTTCT 197 ||| ||| | |||||| ||||| | ||| | ||| | ||||||||||| ||||||||| Sbjct 119 GGAGCTTTGCGAATAAGAACATC-GACAAAGCAGCG-GTATCAGGGGAAAAAGAGTTTCT 176 Query 198 GATCATGATCATGGAGTATAGA-GCTTATTTGATT-GGCGTCAATCTCCATGGAATTCAA 255 ||| || | || | | || | | || |||| | ||||||||||||||| ||| ||| Sbjct 177 GATGATCA-CACA-ATT-TA-ATGTTT-TTTGGGTCGGCGTCAATCTCCATAGAAGTCAG 231 Query 256 AACAACAACATTGATCTATCTATAAAGCAAAAAGG-TAAACTTATCAGCCTAGACTATTC 314 ||||||| | ||||||||||||| ||| || || |||| || | ||| |||| | Sbjct 232 AACAACAGCTTTGATCTATCTATTCAGCTTAA-GGCTAAAATTGTTAGCAGAGACAAAAA 290 Query 315 AGATGAAGAATATCGTACATCTCATTCTCAGGTCTTTCACTGCCATGGTTTATTGTTATT 374 |||||| || || | | || |||| ||| |||||||| | ||| |||| |||| Sbjct 291 AGATGATTTAT-TCCAAAA----AT-CTCAAGTCATTCACTGCAACGGTGTATTTTTATG 344 Query 375 CGTAAACGCCACGA-GCTTAGTGGTTTGGAACCCGTATCGGGGG-AAACCAAA---ATAC 429 |||| | | | |||| ||||||| |||||||||| |||| |||| ||| || | Sbjct 345 CGTACGGGAAAAAATGCTT-GTGGTTTTGAACCCGTATTGGGGACAAACAAAACGGAT-C 402 Query 430 AT-C-AA-ACGCGGGTAT-GTGCAACTAGGA-ATGT-TCGCTTTCGGATACGACAAATCC 483 || | || || | | | | | || || | || | ||| ||||||||||||||||| Sbjct 403 ATGCCAAGAC-CTCCTTTCGGGTG-CTTCGACAGGTAT-GCTCTCGGATACGACAAATCC 459 Query 484 TGCGGTAGCCACAAAATATTGAGGCTTTTCGGTCATTA-CCTAAATAACATCGAA-ATCT 541 |||||||||||||||| |||||||||||||| | | || ||||||| || || |||| Sbjct 460 AGCGGTAGCCACAAAATCCTGAGGCTTTTCGGTG-TCAACCAAAATAACCTC-AATATCT 517 Query 542 ATGATTTGAGCTCTAATTCATGGATGGTTCC-GAGTGGCAATCTTGAATGGGGTATG-AT 599 | ||||||||||||| |||||||||| |||| || ||||| ||||||| | | |||| | Sbjct 518 ACGATTTGAGCTCTAGTTCATGGATGATTCCTGA-TGGCACTCTTGAACGAGATATGGA- 575 Query 600 GTATATGCGAGATGGCGTGTCTTTGAAGGGAAATACTTACTGGTGTGGTAAGGATAAGGA 659 ||||||| | | |||||||||||||| ||| |||||||||||| || ||| |||||||| Sbjct 576 GTATATGAAACAAGGCGTGTCTTTGAATGGAGATACTTACTGGTATGCTAAAGATAAGGA 635 Query 660 ATCAGTAGATTA-TCATTTACTCTGTTTTGATTTTACAAGAGAGAGGTTTGGACCGCGTC 718 |||| |||| | | | ||| | ||||||||||||||||||||||| |||||| | | || Sbjct 636 ATCAATAGACTGGT-ACTTATTATGTTTTGATTTTACAAGAGAGAGATTTGGAACACCTC 694 Query 719 TGCTTCTGCCC---A-TCA--AAGG--AT--T-TG-AT---GG------GTCTCTATCTG 757 ||| ||||||| | | | |||| || | | | || ||||||||||| Sbjct 695 TGCCTCTGCCCTTTAGTAATGAAGGTTATACTCTACACAAAGGTTATAAGTCTCTATCTG 754 Query 758 CAGTTAAAGAAGAGCAGCTAGCAGTGTTAATTAAGCGGTATGATATATCTGCGATAGAGA 817 | ||||||||||| |||| || |||||| | | | || || | | || | | || Sbjct 755 CTCTTAAAGAAGAGAAGCTTGCGGTGTTACT-ATG-GG-AT-ACA-AT--G-GTTA---- 802 Query 818 TTTGGGTTACGAACAAGATTGAGCCTGATGCGGTGTCGTGGAACATCTTCTTAAAATTTG 877 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 803 TTTGGGTTACGAACAAGATTGAGCCTGATGCGGTGTCGTGGAGCATCTTCTTAAAACTTG 862 Query 878 ATATG-AACC---TATGTGATTAT-GCT--GCGAATTTCTTGATTGACGAGGAGATA-AA 929 ||||| |||| ||| | ||| | ||| | ||||||||| ||||||||||| | | || Sbjct 863 ATATGGAACCAAGTATTT-ATTGTCGCTATGGGAATTTCTTCATTGACGAGGAAA-AGAA 920 Query 930 AGTCGCAGTGGTTTTTGATACAGTCAGG--G-CATGGG---GGA-GTCCTAAACTCACAC 982 ||||||||| || ||||| | || ||| | ||||| ||| || ||| | | || Sbjct 921 AGTCGCAGTTGTGTTTGAGAAAGACAGCTCGTCATGGTCATGGATGTA-TAACC-C-CA- 976 Query 983 TCACTTACACCGACATAGCTTACATCAT-TGGAGAGAATGGTTGTTTTAGAAGAGTGGAT 1041 | ||||| | | | ||||||||| | |||||||||||||| ||| | ||| ||| || Sbjct 977 --A-TTACAAC-A-A-AGCTTACAT-AGCTGGAGAGAATGGTTATTTCAAAAGTGTGAAT 1029 Query 1042 CTCCGTAAATCTCGATACCCA-T-CACCTCGTCCA-CTTGCT-TGCTCTTATG 1090 || | |||||||| | || || | || || | ||| |||| | ||||| |||| Sbjct 1030 CTTCTTAAATCTCCAAACACACTACAGCTTGGCCATCTTG-TGTGCTCATATG 1081 > AT3G17320.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:5915427-5916656 REVERSE LENGTH=1230 Length=1230 Score = 69.4 bits (37), Expect = 7e-11 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 1071 TCCACTTGCTTGCTCTTATGTTCCAAGTTCTGTGCAAATC 1110 ||||||||| |||||||||||||||||||||||||||||| Sbjct 1188 TCCACTTGCGTGCTCTTATGTTCCAAGTTCTGTGCAAATC 1227 > AT3G49980.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:18530329-18531477 REVERSE LENGTH=1149 Length=1149 Score = 56.5 bits (30), Expect = 5e-07 Identities = 30/30 (100%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 614 GCGTGTCTTTGAAGGGAAATACTTACTGGT 643 |||||||||||||||||||||||||||||| Sbjct 608 GCGTGTCTTTGAAGGGAAATACTTACTGGT 637 > AT3G18900.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G66600.3). | chr3:6517181-6521019 FORWARD LENGTH=2500 Length=2500 Score = 52.8 bits (28), Expect = 7e-06 Identities = 31/32 (97%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 616 GTGTCTTTGAAGGGAAATACTTACTGGTGTGG 647 |||||||||||||||||||||||||||| ||| Sbjct 1819 GTGTCTTTGAAGGGAAATACTTACTGGT-TGG 1849 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55722604950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5