BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930058
Length=1276
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21110.1 | Symbols: PUR7, PURC, ATPURC | purin 7 | chr3:7402... 2111 0.0
> AT3G21110.1 | Symbols: PUR7, PURC, ATPURC | purin 7 | chr3:7402481-7405641
REVERSE LENGTH=1710
Length=1710
Score = 2111 bits (1143), Expect = 0.0
Identities = 1226/1267 (97%), Gaps = 2/1267 (0%)
Strand=Plus/Plus
Query 11 TGTTTCTGGAATGGCTCAGTGTGTAAGGTCAACTCTAAATCCTTTGAGAACACCCCACAG 70
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||
Sbjct 250 TGTTTCTGGAATGGCTCAGTGTGTGAGGTCAACTCTAAATCCTGTGAGAACACCCCAGAG 309
Query 71 CGTTACTAGGACAGTGTCTGTAAAAAACCCAGCTTTTGCATCAGTCTCGTTCCTTAGAAC 130
| ||||||||| || || ||| |||| |||||||||||||||||||||||||||| || |
Sbjct 310 CTTTACTAGGAAAGCGTATGTGAAAAGCCCAGCTTTTGCATCAGTCTCGTTCCTTCGAGC 369
Query 131 ATTACCGGAGTTCAAGAAATATCCAAAACCCTGTTCATTGGTTATGTCTTGCCAGGGCAA 190
| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 370 AGTACCGGAGTTCAACAAATACCCAAAACCTTGTTCATTGGTTATGTCTTGCCAGGGCAA 429
Query 191 GGTC-CAAAACCAGCAGGAGGAGCGACCGCAACTGTCTCTTGACGATTTAGTCACGAGTA 249
|| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 430 GG-CTCAAAACCAGCAGGAGGAGCGACCACAACTGTCTCTTGACGATTTAGTCACGAGTA 488
Query 250 ACCGGAAAGGAGAGGTTCTTGGCACAATCAAAGACTCGCTTTCTAATTGTCTCTCTGAGA 309
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 ACCGGAAAGGGGAGGTTCTTGGCACAATCAAAGACTCGCTTTCTAATTGTCTCTCTGAGA 548
Query 310 CGAATCTTCTTGCGACTGTTCCTGGTCTGAAATCTAGAATCAAGGGAAAGGTCAGAGATA 369
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 CTAATCTTCTTGCCACTGTTCCTGGTCTGAAATCTAGAATCAAGGGAAAGGTCAGAGATA 608
Query 370 TTTATGATGCTGGTGATTATCTGATTCTTATTACAACTGATCGGTTGAGTGCATTTGACA 429
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 609 TTTATGATGCTGGTGATTATCTGGTTCTTATTACAACTGATCGGTTGAGTGCATTCGACA 668
Query 430 GAAACCTTGCTTCAATTCCCTTCAAAGGCCAGGTTCTTAATGAGACAAGTTTGTGGTGGT 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 GAAACCTTGCTTCAATTCCCTTCAAAGGCCAGGTTCTTAATGAGACAAGTTTGTGGTGGT 728
Query 490 TCAATAACACACAGCACATAACTCCAAATGCCATCGTTTCATCTCCTGATAGAAATGTTG 549
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 729 TCAATAACACACAGCACATAACTCCAAATGCAATCGTTTCATCTCCTGATAGAAATGTTG 788
Query 550 TTATCGCAAAGAAATGCTCGGTTTTTCCCATAGAGTTTGTGGTTAGAGGATATGTGACTG 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 TTATCGCAAAGAAATGCTCGGTTTTTCCCATAGAGTTTGTGGTTAGAGGATATGTGACTG 848
Query 610 GAAGTACTGACACGTCTTTATGGACGGTGTACAATAAAGGTGTTCGGAACTATTGTGGGA 669
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 849 GAAGTACTGACACATCTTTATGGACGGTGTACAATAAAGGTGTTCGGAACTACTGTGGGA 908
Query 670 ATGAGCTCTCAGATGGATTAGTAAAAAACCAGAAGCTTCCAGCTAATATACTTACACCAA 729
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 909 ATGAGCTCTCAGATGGATTAGTTAAAAACCAGAAGCTTCCAGCTAATATACTTACACCAA 968
Query 730 CAACTAAGGCTGCGGATCATGATGTGCCCATCTCTCCAAATGAGATAGTTGAACGTGGAT 789
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 969 CAACTAAGGCTGCGGATCATGATGTGCCCATCTCTCCAAATGAGATAGTTGAAGGTGGAT 1028
Query 790 TCATGACTCAAGCTGAATTTGATGAAGCAAGTATGAAAGCTTTGAGCTTGTTTGAGTTTG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 TCATGACTCAAGCTGAATTTGATGAAGCAAGTATGAAAGCTTTGAGCTTGTTTGAGTTTG 1088
Query 850 GGCAGCGTGTTGCCAAGGAACATGGACTGATACTGGTGGACACAAAGTATGAGTTTGGAA 909
||||| | || |||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1089 GGCAGGGGGTGGCCAAGAAACATGGACTGATATTGGTGGACACAAAGTATGAGTTTGGAA 1148
Query 910 GAAGTAGTGATGGCTCAATCTTATTGATTGATGAGATTCATACACCCGATTCCAGCAGAT 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 GAAGTAGTGATGGCTCAATCTTATTGATTGATGAGATTCATACACCCGATTCCAGCAGAT 1208
Query 970 ACTGGCTTGCGGGTTCATATGAGGAGCGCTTCCAAAAAGGCCTGGAGCCTGAAAATGTTG 1029
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1209 ACTGGCTTGCGGGTTCATATGAAGAGCGCTTCCAAAAAGGCCTGGAGCCTGAAAATGTTG 1268
Query 1030 ATAAGGAGTTCCTAAGATTGTGGTTCAAAGAGAACTCCAATCCTTACGAGGACGAGGTCC 1089
|||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct 1269 ATAAGGAGTTCCTAAGATTGTGGTTCAAAGAGAACTGCAATCCGTATGAGGACGAGGTCC 1328
Query 1090 TGCCTGCTGCTCCAGCAGAACTCGTGACTGAATTAGCTTGGCGGTACATTTTCTTGTATG 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 TGCCTGCTGCTCCAGCAGAACTCGTGACTGAATTAGCTTGGCGGTACATTTTCTTGTATG 1388
Query 1150 AAACTATCACTGGATCAAGAATTGACATTATTCCGACTCAGGAACCAATACATGACCGAA 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 AAACTATCACTGGATCAAGAATTGACATTATTCCGACTCAGGAACCAATACATGACCGAA 1448
Query 1210 TCTCAAGAAACACAAGCCAAGCACTTTCATCTCTCCGTCAACTTTGATCTTTTATATAAC 1269
||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1449 TCTCAAGGAACACAAGCCAAGCACTTTCATCTCTCCGTCAACTTTGATCTTTAATGTAAC 1508
Query 1270 TTTTAGC 1276
||||||
Sbjct 1509 CTTTAGC 1515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62750681250
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5