BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930094
Length=1623
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21370.1 | Symbols: BGLU19 | beta glucosidase 19 | chr3:7524... 2519 0.0
AT3G21360.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 383 3e-105
> AT3G21370.1 | Symbols: BGLU19 | beta glucosidase 19 | chr3:7524054-7527652
REVERSE LENGTH=1889
Length=1889
Score = 2519 bits (1364), Expect = 0.0
Identities = 1536/1620 (95%), Gaps = 7/1620 (0%)
Strand=Plus/Plus
Query 9 AAAGAATCAACAATGAAGTTTCCTCTATTGGGGTTACTTTTGCTCCTAAGTATTGTCGGC 68
||| |||||||||||||| ||||||| |||||||||||||| || ||||| ||||||||
Sbjct 62 AAAAAATCAACAATGAAGATTCCTCTCTTGGGGTTACTTTTACTAATAAGTCTTGTCGGC 121
Query 69 TCTACGACAAGGGCCGAAGAAGGACCTGTTTGCCCGAAGACCGAAACTCTTAGCCGTGCA 128
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 TCTCCGACAAGGGCTGAAGAAGGACCTGTTTGCCCGAAGACCGAAACTCTTAGCCGTGCA 181
Query 129 AGTTTTCCGGAGGGCTTTATGTTTGGTACCGCAACCGCAGCCTTTCAGGTGGAAGGTGCA 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 AGTTTTCCGGAGGGCTTTATGTTTGGTACCGCAACCGCAGCCTTTCAGGTGGAAGGTGCA 241
Query 189 GTAAATGAAGGTTGCAGAGGTCCAAGCCTGTGGGATATCTACACCAAGAAATTTCCACAT 248
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 242 GTAAATGAAGGTTGCAGAGGTCCAAGCCTGTGGGACATCTACACCAAGAAATTTCCACAT 301
Query 249 AGAGTTAAGAATCACAACGCTGACGAGGCCGTCGATTTCTACCATCGCTACAAGGAGGAT 308
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 AGAGTTAAGAATCACAATGCTGACGAGGCCGTCGATTTCTACCATCGCTACAAGGAGGAT 361
Query 309 ATCCAGTTGATGAAAAAGCTGAACACTGATGGTTTTAGACTTTCCATTTCGTGGCCAAGA 368
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 362 ATCCAGTTGATGAAAAAGCTGAACACTGATGGTTTTAGACTTTCTATTTCGTGGCCAAGA 421
Query 369 ATATTTCCTCATGGGAGGATGGAGAAAGGAATCAGCAAAGAAGGGGTTCAATTTTACCAT 428
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 422 ATATTTCCTCATGGGAGGATGGAGAAAGGAATAAGCAAAGAAGGAGTTCAATTTTACCAC 481
Query 429 GATCTTATAGATGAGCTCTTTAAAAATGACATAACACCATTAGTAACGGTTTTTCATTGG 488
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 482 GATCTTATTGATGAGCTCCTTAAAAATGACATAACACCATTAGTAACGGTTTTTCATTGG 541
Query 489 GATACTCCCGCCGATTTGGAAGATGAATACGGTGGCTTTTTAAGCGAACGTATTGTGCCT 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 GATACTCCCGCCGATTTGGAAGATGAATACGGTGGCTTTTTAAGCGAACGTATTGTGCCT 601
Query 549 GATTTTGTGGAGTACGCAAACTTCACGTTCCACGAGTACGGAGACAAAGTGAAACACTGG 608
|||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||
Sbjct 602 GATTTTGTGGAGTATGCAAACTTCACGTTCCACGAGTATGGGGACAAAGTGAAAAACTGG 661
Query 609 ATTACGTTCAACGAGCCATGGGTCTTTAGCCGTTCGGGCTACGACGTTGGAAAGAAAGCA 668
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 662 ATTACGTTCAACGAGCCATGGGTCTTTAGCCGTTCGGGCTACGACGTTGGGAAGAAAGCA 721
Query 669 CCCGGACGTTGTTCTCCTTACGTCAAAGACTTTGGACATCTTTGTCAAGATGGACGGTCT 728
|| |||||||||||||||||||||||||| |||||| | ||||||||||||||||||||
Sbjct 722 CCAGGACGTTGTTCTCCTTACGTCAAAGAGTTTGGAAAGCTTTGTCAAGATGGACGGTCA 781
Query 729 GGATTCGAAGCTTATGTCGTCAGTCACAATTTACTTGTGGGTCATGCTGAAGCTGTTGAT 788
||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 782 GGATTCGAACCTTATGTTGTCAGTCACAATTTACTCGTGGGTCATGCTGAAGCTGTTGAT 841
Query 789 GCTTTCCGAAAATGCGAAAAATGCAAAGGTGGTAAAATCGGGATTGCTCATAGTCCGGCT 848
|||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||
Sbjct 842 GCTTTCCGAAAATGCGAAAAGTGCAAAGGTGGTAAAATCGGAATCGCTCATAGTCCAGCT 901
Query 849 TGGTTTGAACCGGAAGATGTGGAGGGAGGTCAAAATA-TGGTAAACCGTGTGCTAGATTT 907
||||||||||| ||||||||||| ||||||||| | || ||||||||||||| |||||
Sbjct 902 TGGTTTGAACCCGAAGATGTGGAAGGAGGTCAAGCGACTG-TAAACCGTGTGCTTGATTT 960
Query 908 CATCATTGGCTGGCATTTGGATCCTACCACGTACGGAGATTATCCACAGTCTATGAAAGA 967
| |||||||||||||||||||||||||||||| ||| || ||||| ||||||||||||||
Sbjct 961 CGTCATTGGCTGGCATTTGGATCCTACCACGTTCGGGGACTATCCTCAGTCTATGAAAGA 1020
Query 968 TACAGTTGGAACTCGGTTACCAAGATTTAC-AAATGCTCAAAAGGCAAAACTGAAAGATT 1026
| |||||| ||||||| ||||||||||| ||| || ||||||||||||||||||||||
Sbjct 1021 CGCGGTTGGATCTCGGTTGCCAAGATTTACCAAA-GCCCAAAAGGCAAAACTGAAAGATT 1079
Query 1027 CGACAGACTTCGTGGGAATAAACTATTACACTTCCTTCTTTTCAAAGACTGGC-A-A-GC 1083
||||||||||||||||||||||||||||||||||||||||| ||||| ||| | | | |
Sbjct 1080 CGACAGACTTCGTGGGAATAAACTATTACACTTCCTTCTTTGCAAAGGCTGACCAGAAGG 1139
Query 1084 CTGATAGTCGGAACCCAACTTGGGCTACAGATGCTCTAGCCGAATTTGAACCGAAGACTG 1143
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1140 TTGATAGTCGGAACCCGACTTGGGCTACAGATGCTCTAGTCGAATTTGAACCGAAGACTG 1199
Query 1144 TGGATGGATCCATTAAAATTGGTAGCCAGCCCAACACTGCTAAGATGGCTGTATACGCAA 1203
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1200 TGGATGGATCCATTAAAATTGGTAGCCAGCCCAACACTGCTAAGATGGCTGTCTACGCTA 1259
Query 1204 AGGGTTTGAGGAAGCTCCTGAAATACATTAAGGACAGATACAACAACCCCGAGATCATAA 1263
||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1260 AGGGTTTGAGGAAGCTCATGAAATACATTAAGGACAGATACAACAGCCCTGAGATCATAA 1319
Query 1264 TCACTGAGAATGGTTACGGGGAGGACCTTGGCGACAAAGATACAGATCTTAGCGTTGCTC 1323
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1320 TCACTGAGAATGGCTACGGGGAGGACCTTGGCGATAAAGATACAGATCTTAGCGTTGCTC 1379
Query 1324 TCAACGACCACAACAGGAAATACTATCTCCAGAGGCATCTTTTGGCCCTGAATGAGGCTA 1383
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1380 TCAACGACCACAACAGGAAATACTATCTCCAGAGGCATCTTTTGGCACTGAATGAAGCTA 1439
Query 1384 TATGTGAAGACAAGGTGAATGTTACATCGTATTTCTTGTGGTCTTTAATGGACAACTTCG 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 TATGTGAAGACAAGGTGAATGTTACATCGTATTTCTTGTGGTCTTTAATGGACAACTTCG 1499
Query 1444 AGTGGCAAGATGGGTACACAGCAAGGTTCGGGGTTTACTACATCGACTTCAAGAACAACT 1503
|||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 1500 AGTGGCAAGACGGGTACACAGCTAGGTTCGGAGTTTACTACATAGACTTCAAGAACAACT 1559
Query 1504 TGACTCGTATGGAGAAAGAATCTGCAAAATGGCTTTCTGAATTCCTCAAACCTGGCCTGA 1563
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1560 TGACTCGTATGGAGAAAGAATCCGCAAAATGGCTTTCTGAATTCCTCAAACCAGGCCTGA 1619
Query 1564 AACCATCTAAGTCCTCGAAGCTCCATGAGGAGCTCTGAGTCGAGTTTCTCTGCAAGATCT 1623
|||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 1620 AACCATCTAAGTCCTCAAAGCTACACGAGGAGCTCTGAGTCGAGTTTCTTTGCAAGATCT 1679
> AT3G21360.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:7522804-7524580
FORWARD LENGTH=1598
Length=1598
Score = 383 bits (207), Expect = 3e-105
Identities = 227/237 (96%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 1387 GTGAAGACAAGGTGAATGTTACATCGTATTTCTTGTGGTCTTTAATGGACAACTTCGAGT 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1518 GTGAAGACAAGGTGAATGTTACATCGTATTTCTTGTGGTCTTTAATGGACAACTTCGAGT 1459
Query 1447 GGCAAGATGGGTACACAGCAAGGTTCGGGGTTTACTACATCGACTTCAAGAACAACTTGA 1506
||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 1458 GGCAAGACGGGTACACAGCTAGGTTCGGAGTTTACTACATAGACTTCAAGAACAACTTGA 1399
Query 1507 CTCGTATGGAGAAAGAATCTGCAAAATGGCTTTCTGAATTCCTCAAACCTGGCCTGAAAC 1566
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1398 CTCGTATGGAGAAAGAATCCGCAAAATGGCTTTCTGAATTCCTCAAACCAGGCCTGAAAC 1339
Query 1567 CATCTAAGTCCTCGAAGCTCCATGAGGAGCTCTGAGTCGAGTTTCTCTGCAAGATCT 1623
||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 1338 CATCTAAGTCCTCAAAGCTACACGAGGAGCTCTGAGTCGAGTTTCTTTGCAAGATCT 1282
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80170270365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5