BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930126 Length=1139 Score E Sequences producing significant alignments: (Bits) Value AT3G21640.1 | Symbols: TWD1, UCU2, FKBP42, ATFKBP42 | FKBP-type... 1757 0.0 > AT3G21640.1 | Symbols: TWD1, UCU2, FKBP42, ATFKBP42 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr3:7618930-7621477 REVERSE LENGTH=1342 Length=1342 Score = 1757 bits (951), Expect = 0.0 Identities = 1065/1121 (95%), Gaps = 3/1121 (0%) Strand=Plus/Plus Query 1 CAGGTTGATTTGGAAAAATAATGGATCAATCTCTGGAGCATCAAACTCAAACACATGACC 60 ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 131 CAGGTTGATTTGG-GAAATAATGGATGAATCTCTGGAGCATCAAACTCAAACACATGACC 189 Query 61 AAGAGGA-CGAAATAGTTACTGAAGGAAGTGCTGTTGTGCATGGTGAGCCTTCTCAAGAT 119 |||| || |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 190 AAGA-GAGCGAAATAGTTACTGAAGGAAGTGCCGTTGTGCATAGTGAGCCATCTCAAGAG 248 Query 120 GGTAGTGTTCCTCCTAAAGTTGATAGTGAAGCTGAGGTTTTGGATGAGAAAGTCAGTAAG 179 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 249 GGTAATGTTCCTCCTAAAGTTGATAGTGAAGCTGAGGTCTTGGATGAGAAAGTCAGTAAG 308 Query 180 CAGATCATAAAGGAAGGTCATGGTTCCAAACCATCCAAGTACTCGACATGCTTTTTACAC 239 ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct 309 CAGATTATAAAGGAAGGTCACGGTTCCAAACCATCCAAGTACTCTACATGCTTTTTGCAC 368 Query 240 TATAGGGCATGGACCAAAAATTCGCAGCATAAATTTGAAGATACATGGCAAGAGCAGCAA 299 || ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| Sbjct 369 TACAGGGCATGGACCAAAAACTCGCAGCACAAATTTGAGGATACATGGCATGAGCAGCAA 428 Query 300 CCTATTGAATTGGTTCTTGGAAAAGAGAAAAAAGAATTGGCCGGTTTGGCCATCGGTGTT 359 |||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct 429 CCTATTGAATTGGTTCTTGGAAAAGAGAAAAAAGAACTAGCCGGTTTAGCCATCGGTGTT 488 Query 360 TCTAGCATGAAGTCTGGTGAACGTGCGCTTGTGCATGTTGGCTGGGAATTGGCTTATGGG 419 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 489 GCTAGCATGAAGTCTGGTGAACGTGCGCTTGTGCATGTTGGCTGGGAATTAGCTTATGGG 548 Query 420 AAAGAAGGAAACTTTTCTTTTCCGAATGTTCCACCTATGGCGGACTTGTTGTATGAGGTT 479 ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 549 AAAGAAGGAAACTTTTCTTTTCCGAATGTTCCACCTATGGCAGACTTGTTATATGAGGTG 608 Query 480 GAAGTTATTGGATTTGATGAAACAAAGGAGGGAAAGGCTCGCAGTGATATGACTGTGGAG 539 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 609 GAAGTTATTGGGTTTGATGAAACAAAGGAGGGAAAAGCTCGCAGTGATATGACTGTAGAG 668 Query 540 GAAAGGATTGGTGCAGCAGACAGAAGAAAAATGGATGGAAATTCTCTGTTTAAGGAGGAG 599 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 669 GAAAGGATTGGTGCAGCAGACAGAAGAAAAATGGATGGGAATTCTCTTTTTAAGGAGGAG 728 Query 600 AAACTGGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCATACATGGGGGACGATTTT 659 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 729 AAACTGGAGGAAGCCATGCAACAGTATGAAATGGCCATAGCATACATGGGGGACGATTTT 788 Query 660 ATGTTTCAGCTGTATGGGAAGTATCAGGATATGGCTTTAGCAGTTAAAAACCCATGCCAC 719 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 789 ATGTTTCAGCTGTATGGGAAGTACCAGGATATGGCTTTAGCAGTTAAAAACCCATGCCAT 848 Query 720 CTAAACATAGCAGCTTGCCTCATCAAGCTAAAACGATACGATGAAGCAATTGGTCACTGC 779 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 849 CTTAACATAGCAGCTTGCCTCATCAAACTAAAACGATACGATGAAGCAATTGGTCACTGC 908 Query 780 AACATTGTGTTGACAGAAGAAGAGAAAAACCCAAAAGCACTGTTCAGAAGAGGGAAGGCA 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 909 AACATTGTGTTGACAGAAGAAGAGAAAAACCCAAAAGCACTGTTCAGAAGAGGGAAAGCA 968 Query 840 AAGGCAGAGCTAGGACAAATGGACTCAGCACGTGATGATTTCCGAAAGGCGCAAAAGTAT 899 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 969 AAGGCAGAGCTAGGACAGATGGACTCAGCACGTGATGATTTCCGAAAGGCACAAAAGTAT 1028 Query 900 GCTCCTGATGACAAGGCGATTAGAAGAGAGCTACGAGCACTTGCAGAGCAAGAGAAAGCT 959 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1029 GCTCCTGACGACAAGGCGATTAGAAGAGAGCTACGAGCACTTGCAGAGCAAGAGAAAGCC 1088 Query 960 TTGTACCAAAAGCAGAAAGAAATGTACAAAGGAATATTCAAAGGGAAAGAAGAAGGCGGT 1019 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1089 TTGTACCAAAAGCAGAAAGAAATGTACAAAGGAATATTCAAAGGGAAAGATGAAGGTGGT 1148 Query 1020 GCCAAGGCAATGAGCCGTAACTGGTTGATACTGTTATGGCAATGGTTGGTTTCCCTTTTC 1079 || ||| ||| ||||| | ||||||||| |||||||||||||||| |||||||||||| Sbjct 1149 GCTAAGTCAAAGAGCCTTTTTTGGTTGATAGTGTTATGGCAATGGTTTGTTTCCCTTTTC 1208 Query 1080 TCCCGGATCTTTCGACGCCACAGAGTTAAAGCAGATTGATG 1120 ||||| ||||||||||||||||||||||||||||||| ||| Sbjct 1209 TCCCGTATCTTTCGACGCCACAGAGTTAAAGCAGATTAATG 1249 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55873206585 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5