BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930138
Length=1472
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21750.1 | Symbols: UGT71B1 | UDP-glucosyl transferase 71B1 ... 1954 0.0
AT1G05675.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 52.8 9e-06
> AT3G21750.1 | Symbols: UGT71B1 | UDP-glucosyl transferase 71B1
| chr3:7664345-7666195 FORWARD LENGTH=1851
Length=1851
Score = 1954 bits (1058), Expect = 0.0
Identities = 1330/1458 (91%), Gaps = 31/1458 (2%)
Strand=Plus/Plus
Query 4 AAACAAAAGTCGCCGCCATGAAAATCGAACTTGTGTTCATACCTTCGCCGGGCGTGGGCC 63
||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||| ||||
Sbjct 204 AAACAAAAGTCGCCGTCATGAAAGTAGAACTTGTGTTCATACCATCGCCGGGCGTTGGCC 263
Query 64 ATATCCGAGCAACCACGGCGTTAGCAAAGCTTCTCGTCGACAGCGACGACCGCCTCTCCG 123
||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 264 ATATCCGAGCAACAACGGCGTTAGCAAAGCTTCTCGTTGCCAGCGACAACCGCCTCTCCG 323
Query 124 TCACTCTCATCGTCATCCCTTCACAATTCTCCGGA-GATGCTTCTTCCTCCCTCTACACG 182
|||||||||||||||| ||||||| | ||||| || || |||||||||||| ||||||||
Sbjct 324 TCACTCTCATCGTCATTCCTTCACGAGTCTCC-GACGACGCTTCTTCCTCCGTCTACACG 382
Query 183 AAGTCCGAAGACCGTTTCCGCTACATCCTCCTCCCCGCCGGAGATCAATCAACTGAGCAT 242
|| |||||||||||| ||||||||||||||||||||||| |||||||| | ||| | ||
Sbjct 383 AACTCCGAAGACCGTCTCCGCTACATCCTCCTCCCCGCCCGAGATCAAACTACT--G-AT 439
Query 243 ACTTTCGTATCTTACATCGACAACC-GTAAACCACAAGTGACAGCCGCCGTGTCCGAA-C 300
| |||||||||||||||||| || | ||||||||||| | ||||| ||||||| ||
Sbjct 440 -C--TCGTATCTTACATCGACAGCCAG-AAACCACAAGTAAGAGCCGTCGTGTCC-AAGG 494
Query 301 TCGCCCGAGACGTTTCAACACGTTCAGACTCGCGGCTAGCTGGGATTGTCGTGGACATGT 360
|||| |||| |||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 495 TCGCTGGAGATGTTTCAACACGTTCAGACTCACGGCTAGCTGGGATTGTCGTAGACATGT 554
Query 361 TCTGCACGTCGATGATAGACATCGCCGACGAGTTTAACTTCCCGGCTTATATCTTCTACA 420
|||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||
Sbjct 555 TCTGCACGTCCATGATAGACATCGCCGATGAGTTTAACCTCTCGGCTTATATCTTCTACA 614
Query 421 CGTCGAACGCTTCTTATCTCGGGCTACAGTTCCATGTTCAATCTCTTTACGATGAGAAAA 480
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 615 CGTCCAACGCTTCTTATCTCGGGCTACAGTTCCACGTTCAATCTCTTTACGACGAGAAAG 674
Query 481 AACTCGACGTAAGTGAGTT-AAAGGACT-CTGACG-TGAAGTTTGACGTTCCAACTCTGT 537
||||||||||||||||||| ||| || | | || | |||||||||||||||||||||||
Sbjct 675 AACTCGACGTAAGTGAGTTCAAA-GA-TACGGA-GATGAAGTTTGACGTTCCAACTCTGA 731
Query 538 CTCAGCCTTTTCCGGCGAACTGTTTACCTTCAGTCATGCTAGAC-AGTAAATGGTTTCCT 596
|||||||||||||||| || ||||| |||||||| |||||| || || ||||||||||||
Sbjct 732 CTCAGCCTTTTCCGGCAAAATGTTTGCCTTCAGTGATGCTAAACAAG-AAATGGTTTCCT 790
Query 597 TACGTTGTGGGTCGAGCTAGAAGTTTTAGGGAAACGAAGGGTATTTTGGTAAATTCCGTG 656
|||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct 791 TACGTTTTGGGTCGAGCTAGAAGTTTTAGAGCAACGAAGGGTATTTTGGTAAATTCGGTG 850
Query 657 GCGGAGATGGAACCTCAGGCGTTGAAG-TTCTTTTCCGG-CGAGAATGGGAATACGAATA 714
|| || |||||||||||||||||| || ||||||||||| || ||||||||||| ||||
Sbjct 851 GCTGACATGGAACCTCAGGCGTTG-AGTTTCTTTTCCGGTGGA-AATGGGAATACAAATA 908
Query 715 CT-CCACCGGTTTACGCGGTTGGGCCCATAATGGACTTCGAAACTAGCGGCGACGATGAG 773
| || ||||| ||||||||||||||||| |||||||| ||| |||||||||| || |||
Sbjct 909 -TCCCTCCGGTGTACGCGGTTGGGCCCATTATGGACTTAGAATCTAGCGGCGATGAAGAG 967
Query 774 AAGAGAAAGGAGATTTTACGTTGGTTAAAAGAGCAACCGACGAAATCTGTAGTGTTCCTC 833
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||
Sbjct 968 AAGAGAAAGGAGATTTTACATTGGCTAAAAGAGCAACCGACGAAATCTGTAGTGTTTCTC 1027
Query 834 TGTTTTGGGAGCATGGGAGGTTTCAGTGCGGAACAATCAAGAGAAATAGCCGTGGCGCTC 893
|||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||
Sbjct 1028 TGTTTTGGGAGCATGGGAGGTTTCAGTGAGGAACAAGCAAGAGAAATAGCTGTGGCGCTC 1087
Query 894 GAGCGAAGCGGCCACAGGTTTCTCTGGTCGCTCCGTCGCGCTTCT-CTGGTGGAAAACAT 952
||||||||||| |||||||||||||||||||| || ||||||||| ||| ||| |||||
Sbjct 1088 GAGCGAAGCGGACACAGGTTTCTCTGGTCGCTTCGCCGCGCTTCTCCTGTTGG-AAACAA 1146
Query 953 GACTAATGCTCCTCCTGGAGAATTCACGAACCTAGAGGAGATTCTTCCAAAAGGGTTTTT 1012
| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1147 GTCTAATCCTCCTCCCGGAGAATTCACGAACTTAGAGGAGATTCTTCCAAAAGGGTTTTT 1206
Query 1013 AGGTCGGACAGTGGAGATAGGGAAGATCATAAGCTGGGCACCACAAGTGGATGTGCTAAA 1072
|| |||||| |||||||||||||||||||||||||||||||||||||| |||||| | ||
Sbjct 1207 AGATCGGACGGTGGAGATAGGGAAGATCATAAGCTGGGCACCACAAGTAGATGTGTTGAA 1266
Query 1073 GAGTCCTGCGATAGGTGCGTTCGTGACACATTGTGGATGGAACTCGATTCTTGAGAGTCT 1132
|||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1267 TAGTCCTGCTATAGGAGCGTTCGTGACACATTGTGGATGGAACTCAATTCTCGAGAGTCT 1326
Query 1133 ATGGTTCGGTGTTCCGATGGCGGCGTGGCCTATCTATGCGGAGCAACAGTTTAACGCGTT 1192
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1327 TTGGTTCGGTGTTCCGATGGCGGCGTGGCCTATCTATGCTGAGCAACAGTTTAACGCGTT 1386
Query 1193 TCATATGGTGGAGGAGCTTGGTTTAGCGGCGGAGGTGAGGAAGGAGTATCGTAGAGATTT 1252
|||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||
Sbjct 1387 TCATATGGTGGATGAGCTTGGTTTAGCGGCGGAGGTAAAGAAGGAGTACCGTAGAGATTT 1446
Query 1253 TCTGGTGGGGGAGCCGGAGATTGTGACTGCTGATGAGATAGAGAGAGGAATCAAGTGTGC 1312
|||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1447 TCTGGTGGAGGAGCCGGAGATTGTGACGGCTGATGAGATAGAGAGAGGGATCAAGTGTGC 1506
Query 1313 GATGGTGCAGGATAGGCGCAAGATGAGGGAGAGGGTGATGGAGATGAAGGATAAGCTCCA 1372
||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1507 GATGGAGCAGGATA---GCAAGATGAGGAAGAGGGTGATGGAGATGAAGGATAAGCTCCA 1563
Query 1373 CGTGGCGTTGGTGGACGGTGGATCTTCAAACTGTGCTATAAAGAAGTTTGTTCAAGACGT 1432
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 1564 CGTGGCGTTGGTGGACGGTGGATCTTCGAACTGTGCTCTAAAGAAGTTTGTTCAAGACGT 1623
Query 1433 GGTCGATAATGTTCCATA 1450
||||||||||||||||||
Sbjct 1624 GGTCGATAATGTTCCATA 1641
> AT1G05675.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:1701116-1702749 REVERSE LENGTH=1493
Length=1493
Score = 52.8 bits (28), Expect = 9e-06
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1092 TTCGTGACACATTGTGGATGGAACTCGA 1119
||||||||||||||||||||||||||||
Sbjct 1070 TTCGTGACACATTGTGGATGGAACTCGA 1097
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72589988070
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5