BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930150 Length=507 Score E Sequences producing significant alignments: (Bits) Value AT3G21860.1 | Symbols: ASK10, SK10 | SKP1-like 10 | chr3:769977... 455 2e-127 AT3G21850.1 | Symbols: ASK9, SK9 | SKP1-like 9 | chr3:7697089-7... 424 6e-118 AT3G21830.1 | Symbols: ASK8, SK8 | SKP1-like 8 | chr3:7693481-7... 383 9e-106 AT4G34210.1 | Symbols: ASK11, SK11 | SKP1-like 11 | chr4:163790... 311 5e-84 AT4G34470.1 | Symbols: ASK12, SK12 | SKP1-like 12 | chr4:164800... 300 1e-80 > AT3G21860.1 | Symbols: ASK10, SK10 | SKP1-like 10 | chr3:7699777-7700235 REVERSE LENGTH=459 Length=459 Score = 455 bits (246), Expect = 2e-127 Identities = 395/466 (85%), Gaps = 14/466 (3%) Strand=Plus/Plus Query 28 ATGTCGACGAAGATGATC-TCGTTGACGAGCTCTGATGGTCAAACGTTTGAGATCAAAGA 86 ||||||||||||| |||| | |||| |||||| |||||||| | || ||| || |||| Sbjct 1 ATGTCGACGAAGAAGATCAT-ATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGA 59 Query 87 AGATGCCGCACGCCAATGCCAGATCATAAATCATATGATTGAGGACGATTGCGCCGATAG 146 ||| |||||| |||||||||||| |||| |||||||| ||| |||||||| |||||| Sbjct 60 AGAGGCCGCATGCCAATGCCAGACCATAGCTCATATGAGTGAAGACGATTGTACCGATA- 118 Query 147 A-GAAATCCCGCTTCCA-AACGTGACAGGCAAGATTCTTGCGATGGTGCTCGAGTACTGC 204 | | ||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||| Sbjct 119 ATGGAATCCCGCTTCCAGAA-GTGACAGGCAAGATTCTTGAGATGGTGATCGAGTACTGC 177 Query 205 AAGAAGCACCACGTCGATGATGCTAACCCTTCCACCGACGAGGATCTCAAGAAATGGGAC 264 || |||||||||||||||| ||||| |||| | ||||||||||||||||||| |||||| Sbjct 178 AACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGAGGATCTCAAGAAGTGGGAC 237 Query 265 GAA--AAGTTCATGGAAAAAGATCAATTAACGCTCTTTGATCTCATTAAT-GCTGCTAGT 321 || || |||||||||||| |||||| ||| |||||||||||||| || ||||| | | Sbjct 238 -AAGGAA-TTCATGGAAAAATATCAATCCACGATCTTTGATCTCATT-ATGGCTGCGAAT 294 Query 322 TACCTAGACATAC-AAAGCCTTCTTGATCTAGCATGCCAAACTGCCTCGGATATGAGCAA 380 |||||| |||| | |||||||||||||||||||||||||||| | | ||||||||| ||| Sbjct 295 TACCTAAACAT-CAAAAGCCTTCTTGATCTAGCATGCCAAACCGTCGCGGATATGATCAA 353 Query 381 AGCCAAAACTCTGGACCAGACTCGCGAATTCTTCAACATTGAGAATGATTTTACACCTGA 440 || ||| ||| |||| || |||||| |||||||||||||||||||||||| ||||| ||| Sbjct 354 AGACAACACTGTGGAGCACACTCGCAAATTCTTCAACATTGAGAATGATTATACACATGA 413 Query 441 GGAAGAAAAAGCTGTTCTTAAGGACTATCAAAAGGCTTTTGAATGA 486 ||||||| |||| |||| || ||| ||||| || |||||||||| Sbjct 414 GGAAGAAGAAGCGGTTCGTAGGGAGAATCAATGGGGTTTTGAATGA 459 > AT3G21850.1 | Symbols: ASK9, SK9 | SKP1-like 9 | chr3:7697089-7697550 REVERSE LENGTH=462 Length=462 Score = 424 bits (229), Expect = 6e-118 Identities = 393/470 (84%), Gaps = 19/470 (4%) Strand=Plus/Plus Query 28 ATGTCGACGAAGATGATC-TCGTTGACGAGCTCTGATGGTCAAACGTTTGAGATCAAAGA 86 ||||||||||||| |||| | |||| |||||| |||||||| | || ||| || |||| Sbjct 1 ATGTCGACGAAGAAGATCAT-ATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGA 59 Query 87 AGATGCCGCACGCCAATGCCAG---ATCATAAATCATATGATTGAGGACGATTGCGCCGA 143 ||| |||||||||||||||||| |||||| |||||||| ||| | ||||| |||| Sbjct 60 AGAGGCCGCACGCCAATGCCAGATTATCATAGCTCATATGAGTGAAAATGATTGTACCGA 119 Query 144 TAGA-GAAATCCCGCTTCCAAACGTGACAGGCAAGATTCTTGCGATGGTGCTCGAGTACT 202 || | | |||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 120 TA-ATGGAATCCCTCTTCCAAACGTGACAGGCAAGATTCTTGCGATGGTGATCGAGTACT 178 Query 203 GCAAGAAGCACCACGTCGATGATGCTAACCCTTCCACCGACGAGGATCTCAAGAAATGGG 262 |||| |||||||||||||||| ||||| |||| | ||||||| ||||||||||| |||| Sbjct 179 GCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCAAGAAGTGGG 238 Query 263 ACGAAA-AGTTCATGGAAAAAGAT-CAATTAACGCTCTTTGATCTCATTAATGCTGCTAG 320 || || ||||||||||||||||| || | ||| ||||||||||||| || ||||| | Sbjct 239 AC-AAGGAGTTCATGGAAAAAGATACA-TCCACGATCTTTGATCTCATCAAGGCTGCGAA 296 Query 321 TTACCTAGACATACAAA-GCCTTCTTGATCTAGCATGCCAAACTGCCTCGGATATGAGCA 379 ||||||| |||| |||| ||||| ||||||||||||||||||| | | |||| || | || Sbjct 297 TTACCTAAACAT-CAAAAGCCTTTTTGATCTAGCATGCCAAACCGTCGCGGAAATCATCA 355 Query 380 AAGCCAAAACTC-TGGACCAGACTCGCGAATTCTTCAACATTGAGAATGATTTTACACCT 438 ||| ||| |||| || | |||| |||||||||||||||||||||||||||||| |||||| Sbjct 356 AAGGCAACACTCCTG-AGCAGATTCGCGAATTCTTCAACATTGAGAATGATTTAACACCT 414 Query 439 GAGGAAGAAAAAGCTG-TTCTTAAGGACTATCAAAAGG-CTTTTGAATGA 486 ||||||||| ||| | ||| || ||| || ||| || ||||||||||| Sbjct 415 GAGGAAGAAGCAGC-GATTCGTAGGGAGAAT-AAATGGGCTTTTGAATGA 462 > AT3G21830.1 | Symbols: ASK8, SK8 | SKP1-like 8 | chr3:7693481-7693939 REVERSE LENGTH=459 Length=459 Score = 383 bits (207), Expect = 9e-106 Identities = 384/468 (82%), Gaps = 18/468 (4%) Strand=Plus/Plus Query 28 ATGTCGACGAAGATGATC-TCGTTGACGAGCTCTGATGGTCAAACGTTTGAGATCAAAGA 86 ||||||||||| | |||| | ||||| |||||| || ||| ||||||||||||| |||| Sbjct 1 ATGTCGACGAAAAAGATCAT-GTTGAAGAGCTCCGAGGGTAAAACGTTTGAGATTGAAGA 59 Query 87 AGATG-CCGCACGCCAATGCCAGATCATAAATCATATGATTGAGGACGATTGCGCCGATA 145 ||| | |||||||||||||||||| |||| |||||||||||| | ||| || | |||| Sbjct 60 AGA-GACCGCACGCCAATGCCAGACCATAGCTCATATGATTGAAGCCGAATGTACAGATA 118 Query 146 GA-GAAATCCCGCTTCCAAACG-TGACAGGCAAGATTCTTGCGATGGTGCTCGAGTACTG 203 | | ||||| | || ||| | ||||| || ||||||||| ||||||| |||||||||| Sbjct 119 -ACGTAATCCTGGTTTTAAA-GATGACAAGCGAGATTCTTGAGATGGTGATCGAGTACTG 176 Query 204 CAAGAAGCACCACGTCGATGATGCTAACCCTTCCACCGACGAGGATCTCAAGAAATGGGA 263 ||| |||||||||||||||| ||||| |||| | ||||||| |||||| |||| ||||| Sbjct 177 CAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGATGATCTCGAGAAGTGGGA 236 Query 264 CGAA-AAGTTCATGGAAAAAGATCAATTAACGCTCTTTGATCTCATTAATGCTGCTAGTT 322 | || ||||||||||||||||| ||| ||| |||||| ||||| |||||||| | || Sbjct 237 C-AAGGAGTTCATGGAAAAAGATAAATCCACGATCTTTGCTCTCACCAATGCTGCGAATT 295 Query 323 ACCTAGACATAC-AAAGCCTTCTTGATCTAGCATGCCAAACTGCCTCGGATATGAGCAAA 381 |||| ||| || ||||||||||| |||||||| ||||||| | | ||||||||| |||| Sbjct 296 TCCTAAACA-ACAAAAGCCTTCTTCATCTAGCAGGCCAAACCGTCGCGGATATGATCAAA 354 Query 382 GCCAAAACTCTGGACCAGACT-CGCGAATTCTTCAACATTGAGAATGATTTTACACCTGA 440 | ||| |||| | | |||| | ||||||||||||||||||||||||||||| |||||||| Sbjct 355 GGCAACACTCCGAAGCAGA-TGCGCGAATTCTTCAACATTGAGAATGATTTAACACCTGA 413 Query 441 GGAAGAAAAAGCTG-TTCTTAAGGACTATCAAAAGG-CTTTTGAATGA 486 ||||||| ||| | ||| || ||| || ||| || ||||||||||| Sbjct 414 GGAAGAAGCAGC-GATTCGTAGGGAGAAT-AAATGGGCTTTTGAATGA 459 > AT4G34210.1 | Symbols: ASK11, SK11 | SKP1-like 11 | chr4:16379003-16379461 FORWARD LENGTH=459 Length=459 Score = 311 bits (168), Expect = 5e-84 Identities = 374/471 (79%), Gaps = 24/471 (5%) Strand=Plus/Plus Query 28 ATGTCGACGAAGATGATC-TCGTTGACGAGCTCTGATGGTCAAACGTTTGAGATCAAAGA 86 ||||| ||||||||||| | ||||| |||||| |||||||| |||||||| | |||| Sbjct 1 ATGTCTTCGAAGATGATCGT-GTTGATGAGCTCCGATGGTCAGTCGTTTGAGGTGGAAGA 59 Query 87 AGATGCCGCACGCCAATGC-CAGATCATAAATCATATGATTGAGGACGATTGCGCCGATA 145 || | ||| ||||| | |||| |||| |||||| |||| |||||||||| | | Sbjct 60 AGCGGTAGCAATCCAAT-CGCAGACCATAGCGCATATGGTTGAAGACGATTGCGTTGCT- 117 Query 146 GA-GAAATCCCGCTTCCAAACGT-GACAGGCAAGATTCTTGCGATGGTGCTCGAGTACTG 203 || | |||||| ||| ||||||| || | |||||||||||| || ||| |||||||||| Sbjct 118 GATGGAATCCCTCTTGCAAACGTGGA-AAGCAAGATTCTTGTGAAAGTGATCGAGTACTG 176 Query 204 CAAGAAGCACCACGTCGATGATGCTAACCCT-TCCACCGACGAGGATCTCAAGAAATGGG 262 |||||| ||||||||||| || ||||| ||| | | | || ||||||||||| || |||| Sbjct 177 CAAGAAACACCACGTCGACGAGGCTAATCCTAT-CTCTGAAGAGGATCTCAACAACTGGG 235 Query 263 ACGAAAAGTTCATGGAAAAAGATCAATTAACGC-TCTTTGATCTCATTAATGCTGCTAGT 321 |||| ||||||||||| || |||| || | ||||||| ||||| |||||| | | Sbjct 236 ACGAGAAGTTCATGGATCTCGAACAATCCAC-CATCTTTGAACTCATCCTTGCTGCGAAT 294 Query 322 TACCT-AGACATACAAAGCCTT-CTTGATCT-AGCATGCCAAACTGCCT-CGGATATGAG 377 ||||| | ||||| |||| ||| |||||||| | |||||||||||| | |||| |||| Sbjct 295 TACCTCA-ACATAAAAAG-CTTGCTTGATCTCA-CATGCCAAACTG-TTGCGGACATGAT 350 Query 378 CAAAGCCAAAACTCTGGACCAGACTCG--CGAATTCTTCAACATTGAGAATGATTTTACA 435 ||||| ||| |||| || ||| ||| | || | |||||||||||||||||||||||| Sbjct 351 CAAAGGCAAGACTCCAGAGGAGATTCGTTC-AACT-TTCAACATTGAGAATGATTTTACA 408 Query 436 CCTGAGGAAGAAAAAGCTGTTCTTAAGGACTATCAAAAGGCTTTTGAATGA 486 |||||||||||| ||||||||| |||||| ||||| ||||||||||||| Sbjct 409 CCTGAGGAAGAAGAAGCTGTTCGTAAGGAGAATCAATGGGCTTTTGAATGA 459 > AT4G34470.1 | Symbols: ASK12, SK12 | SKP1-like 12 | chr4:16480022-16480480 REVERSE LENGTH=459 Length=459 Score = 300 bits (162), Expect = 1e-80 Identities = 372/471 (79%), Gaps = 24/471 (5%) Strand=Plus/Plus Query 28 ATGTCGACGAAGATGATC-TCGTTGACGAGCTCTGATGGTCAAACGTTTGAGATCAAAGA 86 ||||| ||||||||||| | ||||| |||||| |||||||| |||||||| | |||| Sbjct 1 ATGTCTTCGAAGATGATCGT-GTTGATGAGCTCCGATGGTCAGTCGTTTGAGGTGGAAGA 59 Query 87 AGATGCCGCACGCCAATGC-CAGATCATAAATCATATGATTGAGGACGATTGCGCCGATA 145 || | ||| ||||| | |||| |||| |||||| |||| |||||||||| | | Sbjct 60 AGCGGTAGCAATCCAAT-CGCAGACCATAGCGCATATGGTTGAAGACGATTGCGTTGCT- 117 Query 146 GA-GAAATCCCGCTTCCAAACGT-GACAGGCAAGATTCTTGCGATGGTGCTCGAGTACTG 203 || | |||||| ||| ||||||| || | |||||||||||| || ||| |||||||||| Sbjct 118 GATGGAATCCCTCTTGCAAACGTGGA-AAGCAAGATTCTTGTGAAAGTGATCGAGTACTG 176 Query 204 CAAGAAGCACCACGTCGATGATGCTAACCCT-TCCACCGACGAGGATCTCAAGAAATGGG 262 |||||| |||||||||| || ||||| ||| | | | || ||||||||||| || |||| Sbjct 177 CAAGAAATACCACGTCGACGAGGCTAATCCTAT-CTCTGAAGAGGATCTCAACAAGTGGG 235 Query 263 ACGAAAAGTTCATGGAAAAAGATCAATTAACGC-TCTTTGATCTCATTAATGCTGCTAGT 321 |||| ||||||||||| || |||| || | ||||||| ||||| |||||| | | Sbjct 236 ACGAGAAGTTCATGGATCTCGAACAATCCAC-CATCTTTGAACTCATCCTTGCTGCGAAT 294 Query 322 TACCT-AGACATACAAAGCCTT-CTTGATCT-AGCATGCCAAACTGCCT-CGGATATGAG 377 ||||| | ||||| |||| ||| ||||||| | |||||||||||| | |||| |||| Sbjct 295 TACCTCA-ACATAAAAAG-CTTGTTTGATCTCA-CATGCCAAACTG-TTGCGGACATGAT 350 Query 378 CAAAGCCAAAACTCTGGACCAGACTCG--CGAATTCTTCAACATTGAGAATGATTTTACA 435 ||||| ||| |||| || ||| ||| | || | |||||||||||||||||||||||| Sbjct 351 CAAAGGCAAGACTCCAGAGGAGATTCGTTC-AACT-TTCAACATTGAGAATGATTTTACA 408 Query 436 CCTGAGGAAGAAAAAGCTGTTCTTAAGGACTATCAAAAGGCTTTTGAATGA 486 |||||||||||| ||||||||| |||||| ||||| ||||||||||||| Sbjct 409 CCTGAGGAAGAAGAAGCTGTTCGTAAGGAGAATCAATGGGCTTTTGAATGA 459 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24212858854 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5