BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930204
Length=1426
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22250.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 2111 0.0
> AT3G22250.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr3:7867753-7870229 FORWARD LENGTH=1615
Length=1615
Score = 2111 bits (1143), Expect = 0.0
Identities = 1330/1422 (94%), Gaps = 6/1422 (0%)
Strand=Plus/Plus
Query 1 GGAAGAGAAAAGAAAAAGATATGAAAGTAACACAAAAGCCTAAGATAATATTCGTCCCTT 60
||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 35 GGAAGAGAAAA-AAAAAGATATGAAAGTAACACAAAAGCCAAAGATAATATTCATCCCTT 93
Query 61 ATCCTGCGCAAGGCCATGTTACTCCGATGCTCCACCTTGCATCGGCTTTCCTTAGCCGTG 120
|||| ||||||||||| || ||||||||||| |||||||||||||||||||| |||||||
Sbjct 94 ATCCGGCGCAAGGCCACGTCACTCCGATGCTTCACCTTGCATCGGCTTTCCTCAGCCGTG 153
Query 121 GATTCGCCCCTATCGTTATGACTCCCGAGTCTATCCACCGTCGGATCTCGGCTACTAACG 180
||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 154 GATTCTCCCCTGTCGTTATGACTCCCGAGTCTATCCACCGTAGGATCTCGGCTACTAACG 213
Query 181 TGGATCTTGGGATCACGTTCTTAGCCTTATCTGACGGGCAAGATCGTCCGGACGCACCTC 240
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 214 AGGATCTTGGGATCACGTTCTTGGCCTTATCTGACGGTCAAGATCGTCCGGACGCACCTC 273
Query 241 CCTCGGACTTCTTCTCGATAGAGAATTCGATGGAGAACATCATGCC-CTCTCAGCTCGAA 299
||||||||||||||||||||||||| || ||||||||||||||||| | | |||||||||
Sbjct 274 CCTCGGACTTCTTCTCGATAGAGAACTCAATGGAGAACATCATGCCAC-CACAGCTCGAA 332
Query 300 CGGCTCCTACTAGAAGAAGACTTGGGTGTGGCTTGTGTCGTGGTTGATTTGCTGGCTTCG 359
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 333 CGGCTCCTACTAGAAGAAGACTTGGATGTGGCTTGTGTTGTGGTTGATTTGCTGGCTTCG 392
Query 360 TGGGCTATCGGAGTGGCTGATCGGTGTGGTGTTCCGGTCGCTGGATTCTGGCCGGTGATG 419
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 393 TGGGCTATAGGAGTGGCTGATCGGTGTGGAGTTCCGGTCGCCGGATTCTGGCCGGTGATG 452
Query 420 TTCGCTGCTTACCGTTTGATCCAAGCAATACCGGAGCTAGTACGGACAGGCTTAGTTTCC 479
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 453 TTCGCTGCTTACCGTTTGATCCAAGCAATACCGGAGCTAGTCCGAACAGGCTTAGTTTCC 512
Query 480 CAAAAAGGCTGTCCTCGTCAACTAGAAAAACCAATAGTCCTGCCAGAACAACCGCTCCTA 539
|||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||
Sbjct 513 CAAAAAGGTTGTCCTCGTCAACTAGAAAAAACAATAGTCCAGCCAGAGCAACCGCTCCTA 572
Query 540 TCCGCAGAAGATCTACCGTGGCTGATCGGAACTCCGAAAGCTCATAAAAATCGATTCAAG 599
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 573 TCCGCAGAAGATCTACCGTGGCTGATCGGAACTCCCAAAGCTCAGAAAAAACGATTCAAG 632
Query 600 TTCTGGCAAAGAACTCTAGAACGAACAAAAAGTCTCCGTTGGATATTGGCAAACTCCTTT 659
|||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct 633 TTCTGGCAAAGAACTCTAGAACGAACAAAAAGTCTCCGTTGGATCTTGACAAGCTCCTTT 692
Query 660 AAAGATGAATATGATGATGTCAACAACCACAAAGCATCCTACAAAATATCTAAAGATTTC 719
|||||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||
Sbjct 693 AAAGATGAATATGAAGATGTCGACAACCACAAAGCATCCTACAAAAAATCTAACGATTTA 752
Query 720 AACAAAGAAAACAATGGTCAAAACCCTCAAATCCTTCACGTAGGTCCATTGCATAACCAA 779
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 753 AACAAAGAAAACAATGGTCAAAACCCTCAAATCCTTCATTTAGGTCCATTGCATAACCAA 812
Query 780 GAAGCAACAAATAATATAACTATAACCAAGACTAGTTTTTGGGAAGAAGACATTTCTTGT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 813 GAAGCAACAAATAATATAACTATAACCAAGACTAGTTTTTGGGAAGAAGACATGTCTTGT 872
Query 840 CTTGGTTGGCTTCAAGAACAAAATCCAAACTCAGTCATTTATATATCATTTGGAAGCTGG 899
|| |||||||||||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct 873 CTAGGTTGGCTTCAAGAACAAAACCCGAACTCAGTCATTTATATCTCATTTGGAAGTTGG 932
Query 900 GTTTCTCCTATAGGAGAATCAAATATTCAAACATTGGCATTGGCGTTAGAAGCTTCAGGG 959
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 933 GTTTCTCCTATAGGAGAATCAAATATTCAAACGTTGGCATTGGCGTTGGAAGCGTCAGGG 992
Query 960 AGACCTTTTCTTTGGGCACTAAACCGGGTGTGGCAGGAGGGACTACCACCAGGGTTCGTG 1019
|||||||| |||||||| ||||||| |||||||| ||||||||||||||||| || |||
Sbjct 993 AGACCTTTCCTTTGGGCGTTAAACCGAGTGTGGCAAGAGGGACTACCACCAGGTTTTGTG 1052
Query 1020 CATAGAGTCACAATTACCAAAAACCAAGGAAGGATCGTCTCGTGGGCACCGCAACTTGAA 1079
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1053 CATAGAGTCACAATTACCAAAAACCAAGGAAGGATCGTCTCATGGGCTCCGCAACTTGAA 1112
Query 1080 ATTCTTAAAAACAATTCTGTGGGATGTTACGTGACTCATTGTGGCTGGAACTCGACCATG 1139
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1113 GTTCTTAGAAACGATTCTGTGGGATGTTACGTGACTCATTGTGGCTGGAACTCGACTATG 1172
Query 1140 GAGGCGGTGGCAAGTTCTCGTAGGCTACTATGTTATCCCGTGGCCGGAGACCAGTTTGTG 1199
||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1173 GAGGCAGTGGCAAGTTCCCGGAGGCTACTATGTTATCCGGTGGCCGGAGACCAGTTTGTT 1232
Query 1200 AATTGTAAATATATCGTGGACGTGTGGAAAATTGGGGTGAGATTGAGCGGGTTTGGAGAG 1259
|| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 1233 AACTGTAAATACATCGTGGACGTTTGGAAGATTGGAGTGAGATTGAGCGGGTTTGGAGAG 1292
Query 1260 AAGGAGGTTGAAGATGGGCTAAGGAAAGTAATGGAGGATCAAAATATGGGTGAAAGATTG 1319
||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||
Sbjct 1293 AAGGAGGTTGAAGATGGACTAAGGAAAGTAATGGAGGATCAAGATATGGGTGAGAGATTG 1352
Query 1320 AAGAAGTTGAGAGATAAAGCAATGGGGAATGAAGCTCGTTTGAATTCGGAAATGAATTTT 1379
| |||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1353 AGGAAGTTAAGAGACAGAGCAATGGGGAATGAAGCTCGTTTGAGTTCGGAAATGAATTTT 1412
Query 1380 ACACTTTTTAAAAGT-GAAATAAAATAGACGAGCGAAGTAGT 1420
||| ||||||||| || | || ||||||||||||| |||
Sbjct 1413 ACA-TTTTTAAAAAACGAGCTTAATTAGACGAGCGAAG-AGT 1452
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70280763000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5