BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930217
Length=1162
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22350.1 | Symbols: | F-box and associated interaction doma... 1055 0.0
AT3G22720.1 | Symbols: | F-box and associated interaction doma... 470 2e-131
AT2G04920.1 | Symbols: | F-box and associated interaction doma... 468 6e-131
AT3G22730.1 | Symbols: | F-box and associated interaction doma... 446 3e-124
AT3G22700.1 | Symbols: | F-box and associated interaction doma... 394 1e-108
AT3G22710.1 | Symbols: | F-box family protein | chr3:8026202-8... 206 5e-52
AT3G25460.1 | Symbols: | F-box and associated interaction doma... 95.3 1e-18
> AT3G22350.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7901905-7903041 FORWARD LENGTH=1137
Length=1137
Score = 1055 bits (571), Expect = 0.0
Identities = 972/1157 (84%), Gaps = 61/1157 (5%)
Strand=Plus/Plus
Query 27 ATGTCCGATCTTCC-CCGCGATTTGGTAGAAGAAATACTCTCTAGGATTCCGGCCACATC 85
||||| |||||||| | ||||||||||||||||||||||| ||| || ||||||||||
Sbjct 1 ATGTCTGATCTTCCTTTG-GATTTGGTAGAAGAAATACTCTCAAGGGTTTCGGCCACATC 59
Query 86 TGTGAAACGATTACGATCTACTTGCAAACTATGGAACACTTTATTCAACAACCGAAAATT 145
| ||||||||||||||||||||||||||| |||||||||||||||||| || |||| ||
Sbjct 60 TCTGAAACGATTACGATCTACTTGCAAACAATGGAACACTTTATTCAAAAAACGAAGTTT 119
Query 146 CA-CTGAGAAGA-ACTTTCGTAAAGCTCCAAAGGAGTCTATGGTTCTCATGTTGAAGGAG 203
|| | |||| | |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 120 CAGC-CAGAA-ACACTTTCATATAGCTCCAAAGGAGTCTATGGTTCTCATGTTGAAGGAG 177
Query 204 TGTAGGGTTCGCTCAATGAGCGTCAATCTCAACGTTGCTCCTCCATCTTTAGAGTTTAAA 263
| || ||| ||||||||| |||||||||| ||| ||||||||||| |||||||| ||
Sbjct 178 TACAGAGTTTGCTCAATGAATATCAATCTCAATGTTTCTCCTCCATCTGTAGAGTTTCAA 237
Query 264 GGTGCACTTGGCCT-GAAG--GATTCTCATTCTAATACCGAACAAGTCAATATAACCAAA 320
||| |||||||| | ||| ||||| ||||||||| | ||||||| | ||| | ||
Sbjct 238 GGTACACTTGGCATAAAAGATGATTCCCATTCTAATTTAGGACAAGTCGAGATAGTCGAA 297
Query 321 GTTTCTCACTGTGATGGTTTGTTGTTATGCACCACC-GGAGACGATAGACTTGTGGTTTG 379
|||| ||||||||||||||||||||||||| ||||| || ||| ||||||| ||||||||
Sbjct 298 GTTTATCACTGTGATGGTTTGTTGTTATGCGCCACCAGG-GACAATAGACTCGTGGTTTG 356
Query 380 GAATCCGTGTTTGGGGGAAACCAGGTGGATCCAACACAAA-ACTGGTTACGAG-AGATAC 437
||||||||||||||||||||||||||||||||||| |||| | || | | || ||||||
Sbjct 357 GAATCCGTGTTTGGGGGAAACCAGGTGGATCCAACTCAAAGA-TGAATGC-AGGAGATAC 414
Query 438 TCTAGGTTTTCTTTAGGGTATGAAAACAACAAATCTTG-C--CGTAGCTACAAAATCTTG 494
|||| |||| || |||| || ||||||||||||| ||| | |||| |||||||||||||
Sbjct 415 TCTACGTTTGCTCTAGGATACGAAAACAACAAATTTTGTCGTCGTAACTACAAAATCTTG 474
Query 495 -GGATGTTGGGACCGTATTT-ACGATTACAAACTA-A--ACGGCCGAGGTTTAAGGTTTG 549
|| | ||||| | ||| ||||| ||| || | | ||||| || |||| |||||||
Sbjct 475 AGG-TATTGGGGTTGG-TTTCACGATCACATACCAGACGACGGCGGACGTTTCAGGTTTG 532
Query 550 AAATCTATGACATTA-ACTCTGATTCATGGAAAGTTCTTGATGACCTCGCTCATGACCTC 608
|||| |||||| ||| | |||||||||||||| |||||||||||| || || |||||| |
Sbjct 533 AAATATATGACTTTAGA-TCTGATTCATGGAAGGTTCTTGATGACGTCCCTGATGACCGC 591
Query 609 ATCCTACCGGTAAAT-TGCGTGTCTTTAAAGGGAAACACTTACTGGTTTGGTTCTTTTGT 667
||| ||| |||| | | ||||||||||||||||||||||||||||||||||||| |
Sbjct 592 TTCCCACCAGTAAGTGT-CGTGTCTTTAAAGGGAAACACTTACTGGTTTGGTTCTAATAA 650
Query 668 AAACAACTTATTACTTAGTTTTGATTTTACAACTGAGAGGATTAAA-CATTTTTGTCTTC 726
||| |||| |||| |||||||||||||||||| ||||| ||| || ||| || ||||||
Sbjct 651 AAAGGACTTCTTACGTAGTTTTGATTTTACAACAGAGAG-ATTTAATCATATTGGTCTTC 709
Query 727 CGCCATTTCGGGATCATGGTTTTATGGCTCTATCAGTTGTTGGAGAAGAACGACTATCAG 786
|||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 710 CGCCATCTCGAGATCATGGTTTTATGGCTCTATCAGTTGTTGGAGAAGAACAACTCTCAG 769
Query 787 TGTTACAACCGATTGAGAGATCAAAGATGGAGATATTTGTTACCAATAAAGTTGATAGTG 846
|||||||| |||||||| ||||||||||||||||||||| ||||||||||||| || ||
Sbjct 770 TGTTACAAGAGATTGAGACATCAAAGATGGAGATATTTGTAACCAATAAAGTTGGTACTG 829
Query 847 AAGC-G--GCTTTGTTGTGGAGCAAATCCTTTACAGTGGATTTACCCATTGG-GCTTAGT 902
||| | ||||||||||||||||||||||||| |||||||||||||||||| | | | |
Sbjct 830 AAGAAGCTGCTTTGTTGTGGAGCAAATCCTTTATAGTGGATTTACCCATTGGCGGTCA-T 888
Query 903 T-TTCCTGAGGTTTTCGCGAGTCTTTTAATTGACGAGGAGAAGAAAGTTGCCTTGTGTTG 961
| ||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 889 TGTTC-TGAGGTTTTCGCGAGTCTTTTAATCAACGAGGAGAAGAAAGTGGCCTTGTGTTG 947
Query 962 TAATTTAGCTCT-GAAGACCGGCAGGAACTTGGTATACACTATTGGAGAGGACAGTGAAT 1020
|||||||| | | || ||||| | |||||||| ||| |||||||||||| |||| | |||
Sbjct 948 TAATTTAGATTTCGA-GACCGACGGGAACTTGATATTCACTATTGGAGAAGACAATAAAT 1006
Query 1021 ATTACTCAGAAATCCCTTATGTAGAATCTACAAACGAGCCGTGGTGG--AT--AG----- 1071
||||||||||||||||||||| |||||||| |||| |||||| || ||
Sbjct 1007 ATTACTCAGAAATCCCTTATG------CTACAAACAAGCCATGGTGGTTATGTAGATTTT 1060
Query 1072 CTGCAGAAG--ACAAACCA-TG-T--TGGTTGCCATTTATTTTCAGTTATGTTCCAAGTT 1125
||| | || ||||| | || | ||||| |||||||||| || ||||||||||||||
Sbjct 1061 CTGAAAAATTTACAAAAAAATGGTGGTGGTTTCCATTTATTTACAATTATGTTCCAAGTT 1120
Query 1126 TGGTTCAAATCTTGTAA 1142
|||||||||||||||||
Sbjct 1121 TGGTTCAAATCTTGTAA 1137
> AT3G22720.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8028961-8030097 REVERSE LENGTH=1137
Length=1137
Score = 470 bits (254), Expect = 2e-131
Identities = 839/1101 (76%), Gaps = 122/1101 (11%)
Strand=Plus/Plus
Query 27 ATGTCCGATCTTCCCCGCGATTTGGTAGAAG-AAATACTCTCTAGGATTCCGGCCACATC 85
||||| |||||||| |||||||||| || |||||||||||||| |||| ||||||||
Sbjct 1 ATGTCGGATCTTCCTTTAGATTTGGTAG-AGAAAATACTCTCTAGGGTTCCCGCCACATC 59
Query 86 TGTGAAACGATTACGATCTACTTGCAAACTATGGAACACTTTATTCAACA-ACCGAAAAT 144
| | |||||| ||||||| ||||| | || ||||||| ||||||| || | |||||| ||
Sbjct 60 TCTCAAACGACTACGATCGACTTGTAGACGATGGAACGCTTTATTGAA-AGACCGAAGAT 118
Query 145 TCACTGAGAAGA-ACTTTCGTAAAGCTCCAAAGGAGTCTATG-GTTCTCATGTTGAAGGA 202
|||| ||||| | |||||| |||||| ||||||||||||| | |||||||||||||| ||
Sbjct 119 TCACCGAGAA-ACACTTTCATAAAGCACCAAAGGAGTCTA-GAGTTCTCATGTTGAAAGA 176
Query 203 GTGTAGGG-TTCGCTCAATGAGCGTCAATCTCAACGTTGCTCCTCCATCTTTAGAGTTTA 261
|| ||||| || | |||| |||||||||||||| ||| ||||||||||| |||| ||||
Sbjct 177 GTATAGGGTTTTTC-CAATAAGCGTCAATCTCAAAGTTACTCCTCCATCTGTAGACTTTA 235
Query 262 AAGGTGCACTTGGCCTGAAGGATTCTCATTCTAATACCGAACAAGTCAAT-ATAACCAAA 320
||||||||||||| | |||| ||||||||| | ||||||||| | |||||| ||
Sbjct 236 AAGGTGCACTTGG--T----TATTCCCATTCTAATTCAGAACAAGTC-GTGATAACCGAA 288
Query 321 GTTTCTCACTGTGATGGTTTGTTGTTATGCACCACCGGA-GACGATAGACTTGTGGTTTG 379
|||| |||||| |||||||||||||||||||||||| | ||||||||||| ||||||||
Sbjct 289 GTTTTTCACTGCGATGGTTTGTTGTTATGCACCACC-AATGACGATAGACTCGTGGTTTG 347
Query 380 GAATCCGTGTTTGGGGGAAACCAGGTGGATCCAACACAAAACTGGTTAC-GAGAGATAC- 437
||||||||||||||||||||||| |||||||||| |||| || |||| | |||||||
Sbjct 348 GAATCCGTGTTTGGGGGAAACCAAATGGATCCAACTCAAAGTTGATTACCG-GAGATACG 406
Query 438 TCTAGGT-TTT-CTTTAGGGTATG---AAAACAACAAATCTTGCCGTAGCTACAAAATCT 492
||| | ||| || |||||||| |||||||| |||| ||||||||||| |||||||
Sbjct 407 TCTCCATATTTGCTCTAGGGTATATCCAAAACAACGAATCCTGCCGTAGCTATAAAATCT 466
Query 493 TG-GGATGTTGGGACCGTATTTACGATTACAAA-C-TAAACGGC-C---GAGGTTTAAGG 545
|| ||| |||| | || |||||||||||| | | | || | | ||||||| ||
Sbjct 467 TGTGGAC-TTGGTA---TAGTTACGATTACAATTCATCACCGCCACAAAGAGGTTTGGGG 522
Query 546 TTTGAAATCTATGACATTAACTCTGATTCAT---GGAAAGTTCTTGATGACCTCGCTCAT 602
|||||||| || || ||| ||||||||||| ||| |||||||||||| || |||
Sbjct 523 TTTGAAATATACGAGTTTAGCTCTGATTCATCATGGAGGGTTCTTGATGACGTCAATCAC 582
Query 603 GAC-C--TC---A-TC-CTAC-CGGTAA-AT----TG-CGTGTCTTTAAAGGGAAACACT 647
||| | || | || | || | ||| | || ||||||||| |||||||| |||
Sbjct 583 GACTCCGTCGTCAATCACAACTCCATAATAAGAAGTGGCGTGTCTTTGAAGGGAAATACT 642
Query 648 TAC-TGGTTTGGTTCT--T-TTGTA-AA----C-AACTTATTACTTA-GTTTTGATTTTA 696
|| || || | || | | ||| | || | || || ||||| | |||| |||||||
Sbjct 643 TATATGCTT-GCTTATGATATTGAAGAAAATTCTAAATTTTTACTAATGTTT-GATTTTA 700
Query 697 CAACTGAGAGGATT-AAACATTTTTGTCTTCCGCCATTTCGG-GATCATGGTTTTATGGC 754
|||| ||| | ||| |||| | | || ||||||| ||||| ||| |||| ||||
Sbjct 701 CAACAGAGCG-ATTGAAACGTCTATGCCTTCCGC-ATTTCCAAGATGTTGGTGAAATGGA 758
Query 755 TCTATCAGTTGTTGGAGAAGAACGACTATCAGTGTT-ACA----A-CCG-ATTGAGAGAT 807
|||||| | ||| ||||||||| ||| ||||| || | | | ||| ||| | | |
Sbjct 759 TCTATC--T-GTTAGAGAAGAACAACTCTCAGTATTGA-ATTGGAGCCGTATT-ACA--T 811
Query 808 CAAAGATGGAGATATTTGTTA-CCAATAAAGTTGATAGTGAAGCGGCTTTGTTGTGGAGC 866
||||||||||||||| | || ||||||| |||||| |||||| | ||||||||||
Sbjct 812 CAAAGATGGAGATATG-GATAACCAATAACTTTGATACTGAAGCTACATTGTTGTGGAA- 869
Query 867 AA-A-T-C-CTTT-ACAGTGGATTTACCCATTGGGCTTAGTTTTCCTGAGGTTTTCGCGA 921
|| | | | ||| ||||| || || |||| | ||| | || | ||| | |
Sbjct 870 AAGAGTGCACTTAGACAGTCAATGTA---ATTG---T--GTT--C--GAA-TCTTCTCAA 916
Query 922 GTCTTTTAATT-GACGAGGAGAAGAAAGTTGCCTTGTGTTGTAAT-TTA--GCTC-TGAA 976
|||| | | || ||||||||||||||||| | ||||| ||||||| ||| | | |||
Sbjct 917 GTCTAT-ATTTCGACGAGGAGAAGAAAGTCGTCTTGTATTGTAATGTTAAAGATGGTGA- 974
Query 977 GACCGGCAGGAACTTGGTATACACTATTGGAGAGGAC-AGTGAATATTAC-TCAGAAATC 1034
|||| ||| ||| ||||||||| ||| ||||||||| | || | ||||| | |||||||
Sbjct 975 GACCAGCAAGAAAGTGGTATACATTATCGGAGAGGACGA-TGGACATTACAT-AGAAATC 1032
Query 1035 CCTTAT-GTAGAATCTACAAA 1054
|||| | ||| |||||| |||
Sbjct 1033 CCTT-TCGTAAAATCTATAAA 1052
> AT2G04920.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:1726138-1727268 FORWARD LENGTH=1131
Length=1131
Score = 468 bits (253), Expect = 6e-131
Identities = 671/862 (78%), Gaps = 71/862 (8%)
Strand=Plus/Plus
Query 27 ATGTCCGATCTTCC-CCGCGATTTGGTAGAAGAAATACTCTCTAGGATTCCGGCCACATC 85
||||| |||||||| ||| |||||||| ||||| |||||||||||| | || ||||||||
Sbjct 1 ATGTCTGATCTTCCACCG-GATTTGGTGGAAGACATACTCTCTAGGGTCCCAGCCACATC 59
Query 86 TGTGAAACGATTACGATCTACTTGCAAACTATGGAACACTTTATTCAACAACCGAAAATT 145
| ||||||||||||| | ||||||||||| ||||||| |||||||||| ||||||| |||
Sbjct 60 TCTGAAACGATTACGGTTTACTTGCAAACAATGGAACTCTTTATTCAAAAACCGAAGATT 119
Query 146 CACTGAGAAGAACTTTCGTAAAGCTCCAAAGGAGTCT-ATGGTTCTCATGTTGAAGGAGT 204
||| |||||| ||||| |||||||||||||| ||||| || |||||| | | |||||| |
Sbjct 120 CACAGAGAAGCACTTTTGTAAAGCTCCAAAGCAGTCTCAT-GTTCTCTTATGGAAGGATT 178
Query 205 GTAGGGTTCGCT-CAATGAGCGTCAATCTCAACGTTGCTCCTCCATCTTTAGAGTTTAAA 263
|| |||| | | |||||||| ||||||||||| || || | | ||| |||||||| ||
Sbjct 179 ATACGGTTTG-TCCAATGAGCATCAATCTCAACTTTTCTGGTTCGTCTATAGAGTTT-AA 236
Query 264 G-GTGCACTTGGCCTGAAGGATTCTCATTCTAATACCGAACAAGTCAATATAACCAAAGT 322
| ||| |||| |||| |||||||| |||| |||| | ||||||||| ||||| |||||||
Sbjct 237 GAGTGTACTTAGCCTAAAGGATTCACATTATAATTCAGAACAAGTCTATATAGCCAAAGT 296
Query 323 TTCTCACTGTGATGGTTTGTTGTTATGCACCACCGGA-GA-CGATAGACT-TGTGGTTTG 379
|| |||||| |||||||||||||||||||||||| | || | ||||||| | | |||||
Sbjct 297 TTTTCACTGCGATGGTTTGTTGTTATGCACCACC-AAGGATC-ATAGACTCT-TAGTTTG 353
Query 380 GAATCCGTGTTTGGGGGAAACCAGGTGGATCCAACAC--AAAACTGGTTACGAGAGATAC 437
||||||||||||||||||||||||||||||| ||| |||| || |||| || |||
Sbjct 354 GAATCCGTGTTTGGGGGAAACCAGGTGGATC-AACTTTGAAAA-TGATTACAAGCCATAT 411
Query 438 TCTAGGTTTTCTTTAGGGTATGAAAACAACAAATCTTGCCGTAGCTACAAAATCTTG-GG 496
|||||||||||| |||| || |||| |||||||| ||||||||||||||||||||| ||
Sbjct 412 TCTAGGTTTTCTCTAGGATACAAAAATAACAAATCATGCCGTAGCTACAAAATCTTGAGG 471
Query 497 ATGTTGGGAC--CGTATTTACGATTAC-AAACTAAAC-GGCCGAGGTTTAAGGTTTGAA- 551
| |||| || | ||||| || || |||| | | |||| | ||||| | ||
Sbjct 472 TT-TTGG-ACATCTTATTT--GAC-ACCAAACCATATTGGCC----T--AAGGTAT-AAT 519
Query 552 ATCTATGACATTAACTCTGATTCATGGAAAGTTCTT---GATGAC--CTCGCTCA--TGA 604
|||||||| ||| | |||||||||||| |||||| ||| | ||| |||| | |
Sbjct 520 ATCTATGAGTTTACCACTGATTCATGGAGGGTTCTTATTGATAAAGTCTCTCTCAACT-A 578
Query 605 C---CTCATCCTACCGGTA-AATTGCGTGTCTTT-AAAGGGAAACACTTACTGGTTTGGT 659
| ||||| | | | | ||| | |||||||| ||||| ||| ||||| ||| ||| |
Sbjct 579 CTTTCTCATAGAATCAG-AGAATGGTGTGTCTTTCAAAGG-AAATACTTATTGGCTTGCT 636
Query 660 TCTTT-TGTA-AA-CAACTTA-TTACTTAGTTTTGATTTTACAACTG-AGAGGATT-AAA 713
| | || | || ||| || ||||| ||||||||||||||| || |||| ||| |||
Sbjct 637 T-TAGATGAAGAAACAAATTTCTTACTCGGTTTTGATTTTACAA-TGGAGAG-ATTTAAA 693
Query 714 CATTTTTGTCTTCCGC-CATTTCGGGATCATGGTTTTATGGCTCTATCAGTTGTTGGAGA 772
| ||| |||||||| | || | | || || | |||| |||||| |||||| ||||
Sbjct 694 CGTTTGTGTCTTCC-CTCAAATAAGAATTGTGATACGATGGTTCTATCGGTTGTTAGAGA 752
Query 773 AGAACGACTATCAGTGTTACAACCGA--TTGAGAG-ATCAAAGATGGAGATATTTGT-T- 827
|||| ||| ||||| | ||| | || || | |||||||||||| |||||| |
Sbjct 753 AGAAAAACTCTCAGTATCACATCAGAACTTTTGTTCATCAAAGATGGA--TATTTGGATG 810
Query 828 ACCAATA-AAGTTGATAGTGAA 848
||||||| || |||||||||||
Sbjct 811 ACCAATAGAA-TTGATAGTGAA 831
Score = 56.5 bits (30), Expect = 6e-07
Identities = 37/40 (93%), Gaps = 2/40 (5%)
Strand=Plus/Plus
Query 1098 CCAT-TTATTTTCAGTTATGTTCCAAGTTTGGTTCAAATC 1136
|||| || || |||||||||||||||||||||||||||||
Sbjct 1045 CCATATT-TTGTCAGTTATGTTCCAAGTTTGGTTCAAATC 1083
> AT3G22730.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8031341-8032459 REVERSE LENGTH=1119
Length=1119
Score = 446 bits (241), Expect = 3e-124
Identities = 819/1082 (76%), Gaps = 104/1082 (10%)
Strand=Plus/Plus
Query 21 ATGATGATGTCCGATC-TTCCCCGCGATTTGGTAGAAGAAATACTCTCTAGGATTCCGGC 79
|||||||||||||||| ||| | ||||||||||| ||||||||||||||| |||| ||
Sbjct 1 ATGATGATGTCCGATCTTTCTTTG-GATTTGGTAGAGGAAATACTCTCTAGGGTTCCAGC 59
Query 80 CACATCTGTGAAACGATTACGATCTACTTGCAAACTATGGAACACTTTATTCAACAACC- 138
||||||| | ||||||||||||||||||||||||||||||||| ||||||| || ||||
Sbjct 60 CACATCTCTCAAACGATTACGATCTACTTGCAAACTATGGAACGCTTTATTTAAAAACCC 119
Query 139 GAAAATTCACTGAGAAG-AACTTTCGTAAAGCTCCAAAGGAGTCTA-TGGTTCTCATGTT 196
| | || || ||||| || |||| |||||| ||||||||||| | |||||||||||||
Sbjct 120 GGGATTT-ACCAAGAAGCAA-TTTCTTAAAGCACCAAAGGAGTC-ACTGGTTCTCATGTT 176
Query 197 GAAGGAGTGTAGGGTTCGCTC-AATGAGCGTCAATCTCAACGTTGCTCCTCCATCTTTAG 255
|||||||| ||| ||| | || ||||| || |||||||| |||| || |||| ||| |||
Sbjct 177 GAAGGAGTATAGCGTTTG-TCCAATGATCGCCAATCTCAGCGTTTCTGCTCCGTCTATAG 235
Query 256 AGTTTAAAGGTGCACTTGGCCTGAAGGATTCTCATTCTAATACCGAACAAGTCAATATA- 314
||||||||||||||||| ||| ||| ||| || | || || | ||| ||||| |||||
Sbjct 236 AGTTTAAAGGTGCACTTAACCTAAAGAATTATCCTCCTTATTCAGAAGAAGTCGATATAC 295
Query 315 ACCAAAGTTTCTCACTGTGATGGTTTGTTGTTATGCACCACCG-GAGACGATAGACTTGT 373
| || | || ||||||||||||||| ||| |||| || || | ||| ||||| | ||
Sbjct 296 ATGAA-GCTTGTCACTGTGATGGTTTATTGCTATGTACAACTATG-GACTATAGAATAGT 353
Query 374 GGTTTGGAATCCGTGTTTGGGGGAAACCAGGTGGATCCAA---CACAAAACTGGTTACGA 430
||||||||| ||||||||||||||||| |||||||||| | | ||||| || |
Sbjct 354 GGTTTGGAACCCGTGTTTGGGGGAAACAAGGTGGATCCGATGGCCCAAAA------AC-A 406
Query 431 GAGATACTCTAGGTTTTCTTTAGGGTATGA-AAACAACAAATCTTGCCGTAGCTACAAAA 489
|||||||||||| || |||| || || ||| ||||||| | |||||| ||||||||
Sbjct 407 TT--TACTCTAGGTTTGCTCTAGGATACGAGAAA-AACAAATATGGCCGTATCTACAAAA 463
Query 490 TCTTG-GGATGTTGGGACCGTATTTACGATT-ACAAACTAAACGGCCGAGGTTTAAG-GT 546
||||| || |||||||| ||| || ||| || |||| ||||||| || | | ||
Sbjct 464 TCTTGAGG-TGTTGGGATCGTC---ACAATTCACCAACT----GGCCGAG-TTGATGAGT 514
Query 547 TTGAAATCTATGACATTAACTCTGATTCATGGAAAGTTCTTGATGACCTCGCTCATGACC 606
||||||||||||| ||| |||||||||||||| ||||||||| | |||||| |||
Sbjct 515 TTGAAATCTATGAGTTTAGCTCTGATTCATGGAGGGTTCTTGATCTCGTCGCTCTTGAT- 573
Query 607 T-C-ATCCTACCGGT-A-A-ATTG-CGTGTCTTTAAAGGGAAACACTTACTGGTTTG-GT 659
| | | | || | | | | |||| ||| ||||| |||||||| ||||| ||| ||| ||
Sbjct 574 TGCCA-CATAGCA-TCACATATTGGCGTTTCTTTCAAGGGAAATACTTATTGGCTTGCGT 631
Query 660 TCTTTTGTAAACA-ACTTAT-T--ACT-TAG-TTT--T--GATTTTACAACTGAGAGGAT 709
|| | ||| | || || | ||| | | ||| | ||||||||||| || || ||
Sbjct 632 -CTGATAAAAA-AGACAAATATGGACTCTTGCTTTGCTTCGATTTTACAACAGAAAG-AT 688
Query 710 TAAA-CATTTTTGTCTTCCGCCATTTCGGGATCATGGTTTTA--TGGCTCTATCAGTTGT 766
| | | | | |||||||| |||| || |||| || | | | ||||||||||||||||
Sbjct 689 TTACGCGTCTGTGTCTTCCACCATCTCAGGATG-TG-TCTAAGATGGCTCTATCAGTTGT 746
Query 767 TGGAG-AAGAACGACTATCAGTGTTACAACCGAT-TGAGAG-A--TCAAAGAT---GGAG 818
||||| || ||| ||| ||| ||||| | | | ||| || | |||||||| ||||
Sbjct 747 TGGAGGAA-AACAACTCTCACTGTTA-AGTCAAAGTGATAGTACATCAAAGATAATGGAG 804
Query 819 ATATTTGTTACCAATAAAGTTGATAGTGAAGCGGCTT-TGTTGTGGAGCAAATCCTTTAC 877
|| | || ||||||| || || ||||| | | || ||||||||||||| |||||
Sbjct 805 ATGTGGGTGACCAATA---TT-AT--TGAAGATG-TACTGATGTGGAGCAAATCTTTTAC 857
Query 878 AGTGGATTTACCCATT-G-GGCTTAGT-TT-TCC-TGAGGTTTTCGCGAGTCTTT-TAAT 931
|||||| |||||||| | || | | | || ||| | | ||| ||||| | | || |
Sbjct 858 CGTGGATATACCCATTCGCGG-TGATTATTGTCCGT-A--TTTGA-CGAGT-TATCTAGT 911
Query 932 TGACGAGGAGAAGAAAGTTGCCT-TGTGTTGTAATTTAGCTCT-GAAGACCGGCAGGAAC 989
||||| || |||||||| || | |||||| |||| | | | || || ||| ||
Sbjct 912 CGACGAAGAAAAGAAAGTGGC-TGTGTGTTATAATGAAAATTTTGA-GAAAAGCAACAAG 969
Query 990 TTGGTATACACTATTGGAGAGGACAGTGAATATTACTCAGAAATCCCTT-ATGTAGAATC 1048
||||||| |||||||||||||| || ||| ||| |||||||||||| | ||||||||
Sbjct 970 AAAGTATACATTATTGGAGAGGACAATGGATACTACACAGAAATCCCTTTA-GTAGAATC 1028
Query 1049 TA 1050
||
Sbjct 1029 TA 1030
> AT3G22700.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8024798-8025814 REVERSE LENGTH=1017
Length=1017
Score = 394 bits (213), Expect = 1e-108
Identities = 454/564 (80%), Gaps = 42/564 (7%)
Strand=Plus/Plus
Query 45 GATTTGGTAGAAGAAATACTCTCTAGGATTCCGGCCACATCTGTGAAACGATTACGATCT 104
||||||||||| ||||||||||||||| |||| ||||||||| | ||||||||||||||
Sbjct 19 GATTTGGTAGAGGAAATACTCTCTAGGGTTCCAGCCACATCTCTCAAACGATTACGATCG 78
Query 105 ACTTGCAAACTATGGAACACTTTATTCAACA-ACCGAAAATTCACTGAGAAGAACTTTCG 163
||||| | || ||||||| ||||||| || | |||||| |||||| |||||| |||||||
Sbjct 79 ACTTGTAGACAATGGAACGCTTTATTGAA-AGACCGAAGATTCACAGAGAAGCACTTTCG 137
Query 164 TAAAGCTCCAAAGGAGTCTATGGTTCTCATGTTGAAGGAGTGTAGGGTTCGCTCAATGAG 223
|||||| |||||||||||| | |||||||||||||| | | | ||| ||
Sbjct 138 TAAAGCACCAAAGGAGTCTCTAGTTCTCATGTTGAA--A--G-A----------AATAAG 182
Query 224 CGTCAATCTCAACGTTGCTCCTCCATCTTTAGAGTTTAAAGGTGCACTTGGCCTGAAGGA 283
|||||||||||||||| ||||||||||| |||||||||||| |||||||||| | |||||
Sbjct 183 CGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAAAGATGCACTTGGCTTAAAGGA 242
Query 284 TTCTCATTCTAATACCGAACAAGTCAATATA-ACCAAAGTTTC-TCACTGTGATGGTTTG 341
||| ||||||||| | |||||||| ||||| || ||| ||| |||||| |||||||||
Sbjct 243 TTCCCATTCTAATTCAGAACAAGTTGATATAGTCC-AAG-TTCTTCACTGCGATGGTTTG 300
Query 342 TTGTTATGCACCACCGGA-GACGATAGACTTGTGGTTTGGAATCCGTGTTTGGGGGAAAC 400
||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||
Sbjct 301 TTGTTATGCACCACC-AAGGACAATAGACACGTGGTTTGGAATCCGTGTTTGGGGGAAAC 359
Query 401 C-AGGTGGATCCAACACAAAACTGGTTACGAGAGA-T--ACTCTAGGTTTTCTTTAGGGT 456
| | ||||||||| |||| || ||||| |||| | |||| || ||| || |||| |
Sbjct 360 CCAT-TGGATCCAATTCAAAGTTGATTACGGGAGAGTCTACTCCAGCTTTGCTCTAGGAT 418
Query 457 ATG---AAAACAACAAATCTTGCCGTAGCTACAAAATCTTG-GGATGTTGGGACCGTATT 512
|| |||||||| |||||||||||||||||||||||||| ||| || || | |||
Sbjct 419 ATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGAGGT-GGAAAAGTA-- 475
Query 513 TACGATTACAAACTAAACGGCCGAGGTTTAAG-G--TTTGAAATCTATGACATTAACTCT 569
||||||||||| | | | ||| | | ||| | |||||||| || || ||| ||||
Sbjct 476 -ACGATTACAAA-TCATCA-CCGCG-TCAAAGAGGGTTTGAAATATACGAGTTTATCTCT 531
Query 570 GATTCATGGAAAGTTCTTGATGAC 593
||| ||||| ||| ||||||||
Sbjct 532 GATAAATGGAGGGTTATTGATGAC 555
> AT3G22710.1 | Symbols: | F-box family protein | chr3:8026202-8027274
REVERSE LENGTH=981
Length=981
Score = 206 bits (111), Expect = 5e-52
Identities = 169/196 (86%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 21 ATGATGATGTCCGATCTTCC-CCGCGATTTGGTAGAAGAAATACTCTCTAGGATTCCGGC 79
|||| |||| |||||||||| || |||||||| || |||||||| |||||| |||||||
Sbjct 1 ATGACGATGCCCGATCTTCCGCC-AGATTTGGTCGAGGAAATACTTTCTAGGGTTCCGGC 59
Query 80 CACATCTGTG-AAACGATTACGATCTACTTGCAAACTATGGAACACTTTATTCAACA-AC 137
||||||||| ||| | |||||||||||||||| || ||||||| || ||||||| | |
Sbjct 60 GACATCTGTGAAAAAG-TTACGATCTACTTGCACACAATGGAACGCTATATTCAA-AGA- 116
Query 138 CGAAA-ATTCACTGAGAAGAACTTTCGTAAAGCTCCAAAGGAGTCTATGGTTCTCATGTT 196
|||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct 117 TGAAAGATTCACTGAGAAGCACTTTAGTAAAGCACCAAAGGAGTCTATGGTTCTCATGTT 176
Query 197 GAAGGAGTGTAGGGTT 212
||||||| |||||||
Sbjct 177 GAAGGAGCATAGGGTT 192
Score = 156 bits (84), Expect = 5e-37
Identities = 195/245 (80%), Gaps = 22/245 (9%)
Strand=Plus/Plus
Query 366 AGACTTGTGGTTTGGAATCCGTGTTTGGGGGAAACCAGGTGGATCCAACACAAAACTGGT 425
||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| || |
Sbjct 205 AGACTCGTGGTTTGGAATCCGTGTTTGGGGGAAACCAAGTGGATCCAACTCAAAGTTGAT 264
Query 426 TAC-GAGAGATAC-TCT--AGGTTTTCTTTAGGGTATG---AAAACAACAAATCTTGCCG 478
||| | ||||||| ||| | ||||| | |||||||| |||||||| ||||| ||||
Sbjct 265 TACCG-GAGATACGTCTCCAAGTTTTGTCTAGGGTATATCCAAAACAACGAATCTCGCCG 323
Query 479 TAGCTACAAAATCTTG-GGATGTTGGGACCGTATTTACGATTACAAA-C-TAAACG-GCC 534
|||||| ||||||||| ||| ||||| | || ||||||| ||||| | | | || |||
Sbjct 324 TAGCTATAAAATCTTGCGGA-GTTGGTA---TAGTTACGATGACAAATCATCACCGCGCC 379
Query 535 GA-G-G-TTTAAGGTTTGAAATCTATGACATTAACTCTGATTC---ATGGAAAGTTCTTG 588
| | | ||| |||||||||| || || ||| ||||||||| ||||| |||||||
Sbjct 380 AAAGAGATTTGGGGTTTGAAATATACGAGTTTATCTCTGATTCGTCATGGAGAGTTCTTA 439
Query 589 ATGAC 593
|||||
Sbjct 440 ATGAC 444
> AT3G25460.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:9231581-9232666 REVERSE LENGTH=1086
Length=1086
Score = 95.3 bits (51), Expect = 1e-18
Identities = 98/119 (82%), Gaps = 10/119 (8%)
Strand=Plus/Plus
Query 21 ATGATGATGTCC-GATCTTCCCCG-CGATTTGGTAGAAGAAATACTCT-CTAG-GATTCC 76
||||||||| || || ||| || | |||||| ||| || ||||||| | | | ||||
Sbjct 1 ATGATGATG-CCAGAACTT-CCAGAGGATTTGTTAGTGGAGATACTCTGC-CGCG-TTCC 56
Query 77 GGCCACATCTGTGAAACGATTACGATCTACTTGCAAACTATGGAAC-ACTTTATTCAAC 134
||| |||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct 57 GGCTACATCTTTGAAACGATTACGATCTACTTGCAAACTATGGAACCA-TTTATACAAC 114
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57027819120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5