BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930243 Length=376 Score E Sequences producing significant alignments: (Bits) Value AT3G22540.1 | Symbols: | Protein of unknown function (DUF1677)... 571 1e-162 > AT3G22540.1 | Symbols: | Protein of unknown function (DUF1677) | chr3:7984076-7984627 REVERSE LENGTH=552 Length=552 Score = 571 bits (309), Expect = 1e-162 Identities = 352/373 (94%), Gaps = 1/373 (0%) Strand=Plus/Plus Query 1 ATAGGCTTTTTTGGTGAAAAATGGAGATTGAATCTGTGAGATGCGAGTGTTGTGGGTTAA 60 |||||||| ||| ||| ||||||||||| ||||| |||||||| |||||||||||||||| Sbjct 44 ATAGGCTTCTTTAGTG-AAAATGGAGATCGAATCCGTGAGATGTGAGTGTTGTGGGTTAA 102 Query 61 TGGAAGATTGCACACAAGACTACATTAGTGAGGTCAAATCTAACTTCGACAACAAATGGC 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 103 TGGAAGATTGCACACAAGACTACATTAGTGAGGTCAAATCTAACTTCGACAACAAGTGGC 162 Query 121 TTTGTGGTCTCTGCTCTGAGGCCGTGAGGGACGAAGTAAGTCGCCGGAAGATGACCACCG 180 | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||| | Sbjct 163 TCTGTGGTCTCTGCTCCGAAGCCGTGAGGGACGAAGTGAGTCGCCGGAAGATGACCACAG 222 Query 181 TTGATGAAGCCGTTAAGGCCCACGTGTCGTTTTGTGGCAAGTTTAAAAAAGATAATCCGG 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 223 TTGATGAAGCCGTCAAGGCCCACGTGTCGTTTTGTGGCAAGTTTAAAAAAGATAATCCGG 282 Query 241 CGGTTCATGTGGCCGACGGTATGAGGCAAATGCTACGTAGGAGGTCCGGTGACTTGACGA 300 |||||||||| || || ||||||||||| |||||||| |||||||||||||| ||||||| Sbjct 283 CGGTTCATGTCGCTGATGGTATGAGGCAGATGCTACGGAGGAGGTCCGGTGAGTTGACGA 342 Query 301 CTTCCTCTACGTCCAAGAAGTTTGGTAGATCTAACACCACCAAGTTTTACTGATCCATTT 360 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 343 ATTCCTCTACGTCCAAGAAGTTTGGTAGATCTAACACCACCAAGTTGTACTGATCCATTT 402 Query 361 TTCTTCTATTTCG 373 ||||||||||||| Sbjct 403 TTCTTCTATTTCG 415 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17694247648 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5