BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930261
Length=1043
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22720.1 | Symbols: | F-box and associated interaction doma... 1282 0.0
AT3G22700.1 | Symbols: | F-box and associated interaction doma... 1122 0.0
AT3G22710.1 | Symbols: | F-box family protein | chr3:8026202-8... 490 1e-137
AT3G22350.1 | Symbols: | F-box and associated interaction doma... 466 2e-130
AT2G04920.1 | Symbols: | F-box and associated interaction doma... 372 4e-102
AT3G22730.1 | Symbols: | F-box and associated interaction doma... 355 4e-97
AT4G17200.1 | Symbols: | F-box and associated interaction doma... 69.4 6e-11
AT3G49510.1 | Symbols: | F-box family protein | chr3:18353842-... 67.6 2e-10
AT1G54550.1 | Symbols: | F-box and associated interaction doma... 62.1 1e-08
AT3G44120.1 | Symbols: | F-box and associated interaction doma... 60.2 4e-08
AT3G20690.1 | Symbols: | F-box and associated interaction doma... 56.5 5e-07
> AT3G22720.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8028961-8030097 REVERSE LENGTH=1137
Length=1137
Score = 1282 bits (694), Expect = 0.0
Identities = 913/1014 (90%), Gaps = 33/1014 (3%)
Strand=Plus/Plus
Query 24 ATGTCCGATCTTCCTTTAGATTTGGTAGAGGAAATACTCGCAAGGGTTCCAGCCACATCT 83
||||| |||||||||||||||||||||||| |||||||| | |||||||| |||||||||
Sbjct 1 ATGTCGGATCTTCCTTTAGATTTGGTAGAGAAAATACTCTCTAGGGTTCCCGCCACATCT 60
Query 84 TTCAAACGATTACGATCGACTTGTAGACGATGGGACGCTTTATTAAAAGACCAAAAATTC 143
|||||||| ||||||||||||||||||||||| |||||||||| ||||||| || ||||
Sbjct 61 CTCAAACGACTACGATCGACTTGTAGACGATGGAACGCTTTATTGAAAGACCGAAGATTC 120
Query 144 ACTGAGAAGCACTCTCGTAAAGCACCAAAGGAGTCTATG-GTTCTCATGTTGAAAGAGTA 202
|| ||||| |||| || |||||||||||||||||||| | ||||||||||||||||||||
Sbjct 121 ACCGAGAAACACTTTCATAAAGCACCAAAGGAGTCTA-GAGTTCTCATGTTGAAAGAGTA 179
Query 203 TAGGGTTTGTCCAATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAAAGG 262
|||||||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||||
Sbjct 180 TAGGGTTTTTCCAATAAGCGTCAATCTCAAAGTTACTCCTCCATCTGTAGACTTTAAAGG 239
Query 263 TGCACTTGGTTATTCCCATTCTAGTTCAGAACAAGTCGAGATAACCGAAGTTATTCACTG 322
||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct 240 TGCACTTGGTTATTCCCATTCTAATTCAGAACAAGTCGTGATAACCGAAGTTTTTCACTG 299
Query 323 CGATGGTTTGTTGTTATGCACCACCAATGACAATAGACTCTTGGTTTGGAATCCGTGTTT 382
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 300 CGATGGTTTGTTGTTATGCACCACCAATGACGATAGACTCGTGGTTTGGAATCCGTGTTT 359
Query 383 GGGGGAAACCAAGTGTATCCAACTCAAAGTTGATTACGGGAGAAAC-TACTCCAGCTTTG 441
|||||||||||| || ||||||||||||||||||||| ||||| || | ||||| ||||
Sbjct 360 GGGGGAAACCAAATGGATCCAACTCAAAGTTGATTACCGGAGATACGT-CTCCATATTTG 418
Query 442 CTCTAGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGAGTTGG- 500
||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct 419 CTCTAGGGTATATCCAAAACAACGAATCCTGCCGTAGCTATAAAATCTTGTGGACTTGGT 478
Query 501 AGTAGTAAAGATTACGAA-TCATCACCGCC-CGAAAGAGGTTTGGGGTTTGAAATATACG 558
| |||| | |||||| || ||||||||||| | |||||||||||||||||||||||||||
Sbjct 479 A-TAGTTACGATTAC-AATTCATCACCGCCAC-AAAGAGGTTTGGGGTTTGAAATATACG 535
Query 559 AGTTTAGCTCTGATTCAT---GGAGGGTTCTTGATGACATTAATCACGACTCCTTGGTCA 615
|||||||||||||||||| ||||||||||||||||| | |||||||||||| | ||||
Sbjct 536 AGTTTAGCTCTGATTCATCATGGAGGGTTCTTGATGACGTCAATCACGACTCCGTCGTCA 595
Query 616 AGCACAACTCCGTATTAGGAAGTGGCGTGTCTTTGAAGGGAAATACTTACT-TG-TTCGC 673
| ||||||||| || || ||||||||||||||||||||||||||||||| | || || ||
Sbjct 596 ATCACAACTCCATAATAAGAAGTGGCGTGTCTTTGAAGGGAAATACTTA-TATGCTT-GC 653
Query 674 GTATGATGTTGAAGAAAATTCTAGATTTTTACTTATGTTTGATTTTACAACAGAGAGATT 733
|||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||
Sbjct 654 TTATGATATTGAAGAAAATTCTAAATTTTTACTAATGTTTGATTTTACAACAGAGCGATT 713
Query 734 GAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTCACATGGTTCTATCAGTTGTTAG 793
||||||||||||||||||||||||||||||||||||| | |||| |||||| | |||||
Sbjct 714 GAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTGAAATGGATCTATC--T-GTTAG 770
Query 794 AGAAGAACACCTCTCAATATT-ACATTGGA-CTCGTACTACATCAAAGATGGAGATATGG 851
||||||||| |||||| |||| | |||||| | |||| ||||||||||||||||||||||
Sbjct 771 AGAAGAACAACTCTCAGTATTGA-ATTGGAGC-CGTATTACATCAAAGATGGAGATATGG 828
Query 852 ATAACCAATAACATTGACACTGATGCTACATTGTTGTGGA---GACTGCACTTACACACT 908
|||||||||||| |||| ||||| |||||||||||||||| || |||||||| ||| |
Sbjct 829 ATAACCAATAACTTTGATACTGAAGCTACATTGTTGTGGAAAAGAGTGCACTTAGACAGT 888
Query 909 CGCTGTAATTGTGTTCGAATCTTCTCAAGTCTATTAAT-CGACGAGGAGAAGAAAGTCGT 967
| ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct 889 CAATGTAATTGTGTTCGAATCTTCTCAAGTCTAT-ATTTCGACGAGGAGAAGAAAGTCGT 947
Query 968 CTTGTGTTGTAATGTTAATGATGATGAGACTAGCAAGAACA-TGGATATTACAT 1020
||||| |||||||||||| |||| |||||| |||||||| | ||| ||| ||||
Sbjct 948 CTTGTATTGTAATGTTAAAGATGGTGAGACCAGCAAGAA-AGTGG-TAT-ACAT 998
> AT3G22700.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8024798-8025814 REVERSE LENGTH=1017
Length=1017
Score = 1122 bits (607), Expect = 0.0
Identities = 897/1026 (87%), Gaps = 64/1026 (6%)
Strand=Plus/Plus
Query 24 ATGTCCG-ATCTTCCTTTAGATTTGGTAGAGGAAATACTCGCAAGGGTTCCAGCCACATC 82
|||| || |||||||||| ||||||||||||||||||||| | |||||||||||||||||
Sbjct 1 ATGT-CGAATCTTCCTTTGGATTTGGTAGAGGAAATACTCTCTAGGGTTCCAGCCACATC 59
Query 83 TTTCAAACGATTACGATCGACTTGTAGACGATGGGACGCTTTATTAAAAGACCAAAAATT 142
| ||||||||||||||||||||||||||| |||| |||||||||| ||||||| || |||
Sbjct 60 TCTCAAACGATTACGATCGACTTGTAGACAATGGAACGCTTTATTGAAAGACCGAAGATT 119
Query 143 CACTGAGAAGCACTCTCGTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAAGAGTA 202
||| |||||||||| |||||||||||||||||||||| | |||||||||||| || ||
Sbjct 120 CACAGAGAAGCACTTTCGTAAAGCACCAAAGGAGTCTCTAGTTCTCATGTTG-AA-AG-- 175
Query 203 TAGGGTTTGTCCAATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAAAGG 262
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 -A----------AATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAAAGA 224
Query 263 TGCACTTGG-TT-----ATTCCCATTCTAGTTCAGAACAAGTCGAGATA-ACCGAAGTTA 315
||||||||| || |||||||||||| |||||||||||| || ||| || |||||
Sbjct 225 TGCACTTGGCTTAAAGGATTCCCATTCTAATTCAGAACAAGTTGATATAGTCC-AAGTTC 283
Query 316 TTCACTGCGATGGTTTGTTGTTATGCACCACCAATGACAATAGACTCTTGGTTTGGAATC 375
|||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||
Sbjct 284 TTCACTGCGATGGTTTGTTGTTATGCACCACCAAGGACAATAGACACGTGGTTTGGAATC 343
Query 376 CGTGTTTGGGGGAAACCAAGTGTATCCAACTCAAAGTTGATTACGGGAGAAACTACTCCA 435
||||||||||||||||| | || |||||| |||||||||||||||||||| ||||||||
Sbjct 344 CGTGTTTGGGGGAAACCCATTGGATCCAATTCAAAGTTGATTACGGGAGAGTCTACTCCA 403
Query 436 GCTTTGCTCTAGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGA 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 GCTTTGCTCTAGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTGTGGA 463
Query 496 GTTGGAGTAGTAAAGATTACGAATCATCACCGC-CCGAAAGAGGTTTGGGGTTTGAAATA 554
| |||| ||||| |||||| |||||||||||| | ||||| ||||||||||||
Sbjct 464 GGTGGAAAAGTAACGATTACAAATCATCACCGCGTC-AAAGA------GGGTTTGAAATA 516
Query 555 TACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGATGACATTAATCACGACTCCTTGGTC 614
|||||||||| ||||||| |||||||||| |||||||| | ||||||||||| ||||||
Sbjct 517 TACGAGTTTATCTCTGATAAATGGAGGGTTATTGATGACGTCAATCACGACTCTTTGGTC 576
Query 615 AAGCACAACTCCGTATTAGGA---AG-TG--GCGTGTCTTTGAAGGGAAATACTTACTTG 668
|| ||||||| | |||||| | || ||||||||||||||||||||| ||||| |
Sbjct 577 AATCACAACT--AT-TTAGGACGTTGCTGTCGCGTGTCTTTGAAGGGAAATATTTACTGG 633
Query 669 -TTCGCGT-ATGATGTTGAAGAAAATTCTAGATTTTTACTTATGTTTGATTTTACAACAG 726
|| | | ||||||||||||| |||||||||| ||||||||||||||| |||| |||||
Sbjct 634 CTT-G-TTGATGATGTTGAAGACAATTCTAGATCTTTACTTATGTTTGACTTTAAAACAG 691
Query 727 AGAGATTGAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTCACATGGTTCTATCAG 786
||||||| |||||||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct 692 AGAGATTTAAACGTCTATGCCTTCCGCATTTCGAAAATGTTGGTCACATGGTTTTATCAT 751
Query 787 TTGTTAGAGAAGAACACCTCTCAATATTACATTGGA-CTCGTACTACATCAAAGATGGAG 845
|||||||||||||||| |||||| ||||| |||||| | ||| ||||| |||||||||||
Sbjct 752 TTGTTAGAGAAGAACAACTCTCAGTATTATATTGGAGC-CGTGCTACACCAAAGATGGAG 810
Query 846 ATATGGATAACCAATAACATTGACACTGATGCTACATTGTTGTGGAGACTGCACTTACAC 905
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 811 ATATGGATAACCAATAACATTGATACTGATGCTACATTGTTGTGGAGACTGCACTTAGAC 870
Query 906 ACTCGCTGTAATTGTGTTCGAATCTTCTCAAG--TCTATTAATCGACGAGGAGAAGAAAG 963
||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct 871 ACTCGCTTTAATTGTGTTCGAATCTTCTCAAGTCTCTATT--TCGAGGAGGAGAAGAAAG 928
Query 964 TCGTCTTGTGTTGTAATGTTAA-T-G--A-TGATGA---GA-CTAGCAAGAACATGGATA 1014
|||||||||||||||||||||| | | | |||||| || | ||||||||||||| ||
Sbjct 929 TCGTCTTGTGTTGTAATGTTAAATTGTTAATGATGATAAGATC-AGCAAGAACATGG-TA 986
Query 1015 TTACAT 1020
| ||||
Sbjct 987 T-ACAT 991
> AT3G22710.1 | Symbols: | F-box family protein | chr3:8026202-8027274
REVERSE LENGTH=981
Length=981
Score = 490 bits (265), Expect = 1e-137
Identities = 343/378 (91%), Gaps = 15/378 (4%)
Strand=Plus/Plus
Query 654 GGAAATACTTACTTG-TTCGCGTATGATGTTGAAGAAAATTCTAGATTTTTACTTATGTT 712
||||||||||||||| || || |||||||||||||||||||||||| || |||| |||||
Sbjct 445 GGAAATACTTACTTGCTT-GCTTATGATGTTGAAGAAAATTCTAGAGTTGTACTAATGTT 503
Query 713 TGATTTTACAACAGAGAGATTGAAACGTCTATGCCTTCCGCATTTCCAAGATGTTGGTCA 772
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |
Sbjct 504 TGATTTTACAACAGAGAGATTCAAACGTCTACGCCTTCCGCATTTCCAAGATGTTGGTAA 563
Query 773 CATGGTTCTATCAGTTGTTAGAGAAGAACACCTCTCAATATTACATTGGACTCGTACTAC 832
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 564 TATGGATCTATCAGTTGTTAGAGAAGAACAACTCTCAATATTACATTGGACTCGTAATAC 623
Query 833 ATCAAAGATGGAGATATGGATAACCAATAACATTGACACTGATGCTACATTGTTGTGGAG 892
||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 624 ATCAAAGATGGAGATTTGGATAACTAATAACATTGATACTGATGCTACATTGTTGTGGAG 683
Query 893 ACTGCACTTACACACTC--G-CT------GTAATTGTGTTCGAATCTTCTCAAGTCTAT- 942
||||||||||||||||| | || |||||||||||||| |||||||||||||||
Sbjct 684 ACTGCACTTACACACTCAAGTCTTCTCACGTAATTGTGTTCGAGTCTTCTCAAGTCTATA 743
Query 943 TAATCGACGAGGAGAAGAAAGTCGTCTTGTGTTGTAATGTTAATGATGATGAGACTAGCA 1002
|| ||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct 744 TA-TCGACAAGGAGAAGAAAGTTGTCTTGTGTTGTAATGTTAATGATGATGCGACCAGCA 802
Query 1003 AGAACATGGATATTACAT 1020
||||||| | ||| ||||
Sbjct 803 AGAACATAG-TAT-ACAT 818
Score = 291 bits (157), Expect = 1e-77
Identities = 221/250 (88%), Gaps = 11/250 (4%)
Strand=Plus/Plus
Query 351 GACAATAGACTCTTGGTTTGGAATCCGTGTTTGGGGGAAACCAAGTGTATCCAACTCAAA 410
||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 199 GACAAAAGACTCGTGGTTTGGAATCCGTGTTTGGGGGAAACCAAGTGGATCCAACTCAAA 258
Query 411 GTTGATTACGGGAGAAAC-TACTCCA-GCTTTGCTCTAGGATATATCCAAAACAACGAAT 468
||||||||| ||||| || | ||||| | |||| |||||| |||||||||||||||||||
Sbjct 259 GTTGATTACCGGAGATACGT-CTCCAAGTTTTG-TCTAGGGTATATCCAAAACAACGAAT 316
Query 469 CTTGCCGTAGCTACAAAATCTTGTGGAGTTGG-AGTAGTAAAGATTACGAATCATCACCG 527
|| |||||||||| ||||||||| |||||||| | |||| | ||| || |||||||||||
Sbjct 317 CTCGCCGTAGCTATAAAATCTTGCGGAGTTGGTA-TAGTTACGATGACAAATCATCACCG 375
Query 528 C-CCGAAAGAGGTTTGGGGTTTGAAATATACGAGTTTAGCTCTGATTC---ATGGAGGGT 583
| || |||||| |||||||||||||||||||||||||| ||||||||| |||||| ||
Sbjct 376 CGCC-AAAGAGATTTGGGGTTTGAAATATACGAGTTTATCTCTGATTCGTCATGGAGAGT 434
Query 584 TCTTGATGAC 593
|||| |||||
Sbjct 435 TCTTAATGAC 444
Score = 189 bits (102), Expect = 5e-47
Identities = 161/190 (85%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 23 GATGTCCGATCTTCCTTTAGATTTGGTAGAGGAAATACTCGCAAGGGTTCCAGCCACATC 82
|||| |||||||||| ||||||||| ||||||||||| | |||||||| || |||||
Sbjct 6 GATGCCCGATCTTCCGCCAGATTTGGTCGAGGAAATACTTTCTAGGGTTCCGGCGACATC 65
Query 83 T-TTCAAACGATTACGATCGACTTGTAGACGATGGGACGCTTTATTAAAAGACCAAAAAT 141
| | ||| | |||||||| ||||| | || |||| ||||| |||| ||||| ||| ||
Sbjct 66 TGTGAAAAAG-TTACGATCTACTTGCACACAATGGAACGCTATATTCAAAGATGAAAGAT 124
Query 142 TCACTGAGAAGCACTCTCGTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAAGAGT 201
||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||
Sbjct 125 TCACTGAGAAGCACTTTAGTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAGGAGC 184
Query 202 ATAGGGTTTG 211
||||||||||
Sbjct 185 ATAGGGTTTG 194
> AT3G22350.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7901905-7903041 FORWARD LENGTH=1137
Length=1137
Score = 466 bits (252), Expect = 2e-130
Identities = 772/1007 (77%), Gaps = 99/1007 (10%)
Strand=Plus/Plus
Query 24 ATGTCCGATCTTCCTTTAGATTTGGTAGAGGAAATACTCGCAAGGGTTCCAGCCACATCT 83
||||| ||||||||||| ||||||||||| ||||||||| |||||||| | |||||||||
Sbjct 1 ATGTCTGATCTTCCTTTGGATTTGGTAGAAGAAATACTCTCAAGGGTTTCGGCCACATCT 60
Query 84 TTCAAACGATTACGATCGACTTGTAGACGATGGGACGCTTTATT-AAAAGACCAAAAATT 142
| |||||||||||||| ||||| | || |||| || ||||||| |||| | | || ||
Sbjct 61 CTGAAACGATTACGATCTACTTGCAAACAATGGAACACTTTATTCAAAA-AACGAAGTTT 119
Query 143 CA-CTGAGAAGCACTCTCGTAAAGCACCAAAGGAGTCTATGGTTCTCATGTTGAAAGAGT 201
|| | |||| |||| || || ||| ||||||||||||||||||||||||||||| ||||
Sbjct 120 CAGC-CAGAAACACTTTCATATAGCTCCAAAGGAGTCTATGGTTCTCATGTTGAAGGAGT 178
Query 202 ATAGGGTTTG-TCCAAT-AAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAA 259
| || ||||| || ||| || |||||||||| ||| ||||||||||| |||||||| |
Sbjct 179 ACAGAGTTTGCTC-AATGAATA-TCAATCTCAATGTTTCTCCTCCATCTGTAGAGTTTCA 236
Query 260 AGGTGCACTTGG--T------T-ATTCCCATTCTAGTTCAGAACAAGTCGAGATAACCGA 310
|||| ||||||| | | |||||||||||| || || ||||||||||||| |||
Sbjct 237 AGGTACACTTGGCATAAAAGATGATTCCCATTCTAATTTAGGACAAGTCGAGATAGTCGA 296
Query 311 AGTT-ATTCACTGCGATGGTTTGTTGTTATGCACCACCAATGACAATAGACTCTTGGTTT 369
|||| || ||||| |||||||||||||||||| |||||| |||||||||||| ||||||
Sbjct 297 AGTTTAT-CACTGTGATGGTTTGTTGTTATGCGCCACCAGGGACAATAGACTCGTGGTTT 355
Query 370 GGAATCCGTGTTTGGGGGAAACCAAGTGTATCCAACTCAAAGTTGATTACGGGAGAAACT 429
|||||||||||||||||||||||| ||| ||||||||||||| ||| | | ||||| |||
Sbjct 356 GGAATCCGTGTTTGGGGGAAACCAGGTGGATCCAACTCAAAGATGAATGCAGGAGATACT 415
Query 430 ACTCCAGCTTTGCTCTAGGATATATCCAAAACAACGAATCTTG-C--CGTAGCTACAAAA 486
|| | | |||||||||||||| | |||||||| ||| ||| | |||| ||||||||
Sbjct 416 -CTAC-G-TTTGCTCTAGGATA---CGAAAACAACAAATTTTGTCGTCGTAACTACAAAA 469
Query 487 TCTTGTGG-AGTTGGAGTAG-TAA-A-GATTACGA-ATCATCACCGCCCGAAAGAGGTTT 541
||||| || | |||| || | | | ||| || | | || || | | | || ||||
Sbjct 470 TCTTGAGGTA-TTGGGGTTGGTTTCACGATCAC-ATACCAG-AC-GACGGCG-GACGTTT 524
Query 542 GGGGTTTGAAATATACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGATGACATTAATCA 601
||||||||||||| || ||||| ||||||||||||| ||||||||||||| | | |
Sbjct 525 CAGGTTTGAAATATATGACTTTAGATCTGATTCATGGAAGGTTCTTGATGACGTCCCTGA 584
Query 602 CGACTC-CTTGGTCAAGCACAACTCCGTATTAGGAAGTGGCGTGTCTTTGAAGGGAAATA 660
||| | ||| | | || | | ||| || || ||||||||| |||||||| |
Sbjct 585 TGAC-CGCTT---C---C-CA-C-CAGTA--AGT--GT--CGTGTCTTTAAAGGGAAACA 628
Query 661 CTTACTTGTTCGCGTATGATGTTGAAGAAAATTCTAGATTTTTACTTATGTTT-GATTTT 719
|||||| ||| | || | | | || ||| || | || || || |||| ||||||
Sbjct 629 CTTACTGGTTTG-GT-TC-TAAT-AA-AAAGGACT---TCTT-ACGTA-GTTTTGATTTT 678
Query 720 ACAACAGAGAGATTGAAACGTCTATGC-CTTCCGC-ATTTCCAAGATGTTGGTCACATGG 777
|||||||||||||| || | | | || ||||||| || || | ||| |||| ||||
Sbjct 679 ACAACAGAGAGATTTAATCATAT-TGGTCTTCCGCCATCTCGA-GATCATGGTTTTATGG 736
Query 778 TTCTATCAGTTGTTAGAGAAGAACACCTCTCAATATTACATTG-GACTCGTACTACATCA 836
||||||||||||| |||||||||| |||||| | ||||| | || | | | ||||||
Sbjct 737 CTCTATCAGTTGTTGGAGAAGAACAACTCTCAGTGTTACAA-GAGATT-G-AG-ACATCA 792
Query 837 AAGATGGAGATATG-GATAACCAATAACA-TTGACACTGATG---CTACATTGTTGTGGA 891
||||||||||||| | |||||||||| | ||| ||||| | || | ||||||||||
Sbjct 793 AAGATGGAGATATTTG-TAACCAATAA-AGTTGGTACTGAAGAAGCTGCTTTGTTGTGGA 850
Query 892 G-A---C-T-----GC--ACTTACACACTCGCTGTAATTGTGT-TCGAA-TCTTCTCAAG 937
| | | | | | |||| || | || || ||||| | | || | ||| | ||
Sbjct 851 GCAAATCCTTTATAGTGGATTTACCCATTGGCGGTCATTGT-TCT-GAGGTTTTCGCGAG 908
Query 938 TCTATTAATCGACGAGGAGAAGAAAGTCGTCTTGTGTTGTAATGTTA 984
||| |||||| |||||||||||||||| | ||||||||||||| |||
Sbjct 909 TCTTTTAATCAACGAGGAGAAGAAAGTGGCCTTGTGTTGTAAT-TTA 954
> AT2G04920.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:1726138-1727268 FORWARD LENGTH=1131
Length=1131
Score = 372 bits (201), Expect = 4e-102
Identities = 663/874 (76%), Gaps = 79/874 (9%)
Strand=Plus/Plus
Query 24 ATGTCCGATCTTCCTTTAGATTTGGTAGAGGAAATACTCGCAAGGGTTCCAGCCACATCT 83
||||| |||||||| |||||||| || || |||||| | ||||| ||||||||||||
Sbjct 1 ATGTCTGATCTTCCACCGGATTTGGTGGAAGACATACTCTCTAGGGTCCCAGCCACATCT 60
Query 84 TTCAAACGATTACGATCGACTTGTAGACGATGGGACGCTTTATT-AAAAGACCAAAAATT 142
| ||||||||||| | ||||| | || |||| || ||||||| |||| ||| || |||
Sbjct 61 CTGAAACGATTACGGTTTACTTGCAAACAATGGAACTCTTTATTCAAAA-ACCGAAGATT 119
Query 143 CACTGAGAAGCACTCTCGTAAAGCACCAAAGGAGTCT-ATGGTTCTCATGTTGAAAGAGT 201
||| |||||||||| | ||||||| |||||| ||||| || |||||| | | ||| || |
Sbjct 120 CACAGAGAAGCACTTTTGTAAAGCTCCAAAGCAGTCTCAT-GTTCTCTTATGGAAGGATT 178
Query 202 ATAGGGTTTGTCCAATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTTAAAG 261
||| |||||||||||| ||| ||||||||||| || || | | |||||||||||| |||
Sbjct 179 ATACGGTTTGTCCAATGAGCATCAATCTCAACTTTTCTGGTTCGTCTATAGAGTTT-AAG 237
Query 262 -GTGCACTT-G-GT----TATTCCCATTCTAGTTCAGAACAAGTCGAGATAACCGAAGTT 314
||| |||| | | |||| |||| || ||||||||||||| | ||| || |||||
Sbjct 238 AGTGTACTTAGCCTAAAGGATTCACATTATAATTCAGAACAAGTCTATATAGCCAAAGTT 297
Query 315 ATTCACTGCGATGGTTTGTTGTTATGCACCACCAATGA-CAATAGACTCTTGGTTTGGAA 373
|||||||||||||||||||||||||||||||||| || | |||||||||| ||||||||
Sbjct 298 TTTCACTGCGATGGTTTGTTGTTATGCACCACCAAGGATC-ATAGACTCTTAGTTTGGAA 356
Query 374 TCCGTGTTTGGGGGAAACCAAGTGTATCCAACTC--AAAGTTGATTACGGGAGAAACTAC 431
|||||||||||||||||||| ||| ||| |||| ||| | |||||| || | ||
Sbjct 357 TCCGTGTTTGGGGGAAACCAGGTGGATC-AACTTTGAAAAT-GATTACA--AGCCA-TAT 411
Query 432 TCCAGCTTTGCTCTAGGATATATCCAAAACAACGAATCTTGCCGTAGCTACAAAATCTTG 491
|| || ||| |||||||||| | |||| ||| |||| |||||||||||||||||||||
Sbjct 412 TCTAGGTTTTCTCTAGGATACA---AAAATAACAAATCATGCCGTAGCTACAAAATCTTG 468
Query 492 TGGAGTTGGAGTAGTAAAGATTACGAATCATCACCGCCCGAAAGAGGTTTGGGGTTTGAA 551
|| ||||| | | ||| || || || || | | || | ||| | ||
Sbjct 469 AGGTTTTGGAC-A-TCTT-ATTT-GA--CACCAAA-CC--ATATTGGCCTAAGGTAT-AA 518
Query 552 -ATATACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGAT-GACATTAATCACGACTCCT 609
|| || ||||||| | |||||||||||||||||||| || || | || | | ||| |
Sbjct 519 TATCTATGAGTTTACCACTGATTCATGGAGGGTTCTT-ATTGA--T-AA--A-GTCTC-T 570
Query 610 TGGTCAAGC-ACAA-CTCC--GTATTAG-GAAGTGGCGTGTCTTTGAAGGGAAATACTTA 664
|||| | || ||| | || || ||| ||| |||||||| || |||||||||||
Sbjct 571 C--TCAA-CTACTTTCTCATAGAATCAGAGAA-TGGTGTGTCTTTCAAAGGAAATACTTA 626
Query 665 CTTG--TTCGCGTATGATGTTGAAGAAAATTCTAGATTT-TTACTTATGTTT-GATTTTA 720
||| || || | | | | |||||||| | | |||| ||||| |||| |||||||
Sbjct 627 -TTGGCTT-GCTT-T-A-GATGAAGAAA---CAA-ATTTCTTACTCG-GTTTTGATTTTA 676
Query 721 CAACAGAGAGATTGAAACGTCTATGCCTTCCG-CATTTCCAAGATGTTG-G-TCAC-ATG 776
||| |||||||| |||||| | || ||||| || | |||| ||| | | || |||
Sbjct 677 CAATGGAGAGATTTAAACGTTTGTGTCTTCCCTCAAAT--AAGAA-TTGTGAT-ACGATG 732
Query 777 GTTCTATCAGTTGTTAGAGAAGAACACCTCTCAATATTACATTGGA-CTCGTACTACATC 835
|||||||| ||||||||||||||| | |||||| ||| |||| || || | | ||||
Sbjct 733 GTTCTATCGGTTGTTAGAGAAGAAAAACTCTCAGTATCACATCAGAACTTTTGTT-CATC 791
Query 836 AAAGATGGAGATATGGATAACCAATA-ACATTGA 868
||||||||| || ||||| ||||||| | |||||
Sbjct 792 AAAGATGGATATTTGGATGACCAATAGA-ATTGA 824
> AT3G22730.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8031341-8032459 REVERSE LENGTH=1119
Length=1119
Score = 355 bits (192), Expect = 4e-97
Identities = 669/884 (76%), Gaps = 94/884 (11%)
Strand=Plus/Plus
Query 20 GATGATGTCCGATCTTCCTTTAGATTTGGTAGAGGAAATACTCGCAAGGGTTCCAGCCAC 79
|||||||||||||||| |||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 3 GATGATGTCCGATCTTTCTTTGGATTTGGTAGAGGAAATACTCTCTAGGGTTCCAGCCAC 62
Query 80 ATCTTTCAAACGATTACGATCGACTTGTAGACGATGGGACGCTTTA-TTAAAAGACCAAA 138
|||| |||||||||||||||| ||||| | || |||| |||||||| |||||| |||
Sbjct 63 ATCTCTCAAACGATTACGATCTACTTGCAAACTATGGAACGCTTTATTTAAAA-ACCCGG 121
Query 139 AATTCACTGAGAAGCACTCTCGTAAAGCACCAAAGGAGTCTA-TGGTTCTCATGTTGAAA 197
||| || ||||||| | || |||||||||||||||||| | ||||||||||||||||
Sbjct 122 GATTTACCAAGAAGCAATTTCTTAAAGCACCAAAGGAGTC-ACTGGTTCTCATGTTGAAG 180
Query 198 GAGTATAGGGTTTGTCCAATAAGCGTCAATCTCAACGTTACTCCTCCATCTATAGAGTTT 257
|||||||| ||||||||||| | || |||||||| |||| || |||| ||||||||||||
Sbjct 181 GAGTATAGCGTTTGTCCAATGATCGCCAATCTCAGCGTTTCTGCTCCGTCTATAGAGTTT 240
Query 258 AAAGGTGCACTT--GGT----TATT-CCCATTC-TAGTTCAGAACAAGTCGAGATAAC-C 308
|||||||||||| | ||| || | | || ||||||| ||||||| || ||
Sbjct 241 AAAGGTGCACTTAACCTAAAGAATTATCC-TCCTTA-TTCAGAAGAAGTCGATAT-ACAT 297
Query 309 GAAG-TTATTCACTGCGATGGTTTGTTGTTATGCACCACCAAT-GACAATAGACTCTTGG 366
|||| || |||||| |||||||| ||| |||| | || | || ||| ||||| | |||
Sbjct 298 GAAGCTT-GTCACTGTGATGGTTTATTGCTATGTA-CAACTATGGACTATAGAATAGTGG 355
Query 367 TTTGGAATCCGTGTTTGGGGGAAACCAA-GTGTATCC-A--ACTCAAAGTTGATTACGGG 422
||||||| |||||||||||||||| ||| ||| |||| | | |||| | ||
Sbjct 356 TTTGGAACCCGTGTTTGGGGGAAA-CAAGGTGGATCCGATGGCCCAAA----A--AC--- 405
Query 423 AGAAACTACTCCAGCTTTGCTCTAGGATATATCCA-AAACAACGAATCTTGCCGTAGCTA 481
| ||||| || ||||||||||| ||| | | ||| ||| ||| | |||||| |||
Sbjct 406 ---ATTTACTCTAGGTTTGCTCTAGG--ATA-CGAGAAA-AACAAATATGGCCGTATCTA 458
Query 482 CAAAATCTTGTGGAGTT-GGAGTAGT-AAAGATTACGAATCATCACCGCCCGAAAGAGGT 539
|||||||||| || ||| ||| | || | | ||| | | || || | ||| || |
Sbjct 459 CAAAATCTTGAGGTGTTGGGA-TCGTCACA-ATT-C--ACCA--ACTGGCCG--AGTTG- 508
Query 540 TTGGGGTTTGAAATATACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGATGACATTAAT 599
| | ||||||||| || ||||||||||||||||||||||||||||||||| | | |
Sbjct 509 AT-GAGTTTGAAATCTATGAGTTTAGCTCTGATTCATGGAGGGTTCTTGAT--C-TCG-T 563
Query 600 CACGACTCCTTGGTCAAGC-ACAACTCCGTATTAGGA-AGTGGCGTGTCTTTGAAGGGAA 657
| | ||| ||| | || ||| | | || | | | |||||| ||||| |||||||
Sbjct 564 C--G-CTC-TTGATT--GCCACA--TA-GCATCAC-ATATTGGCGTTTCTTTCAAGGGAA 613
Query 658 ATACTTACTTG--TTCGCGTATGATGTTGAAGA-AAATTCTAGATTTTTACTTATGTTT- 713
||||||| ||| || |||| |||| |||| |||| | || | || ||| || ||
Sbjct 614 ATACTTA-TTGGCTT-GCGTCTGATAAAAAAGACAAATA-TGGACTCTTGCTT-TGCTTC 669
Query 714 GATTTTACAACAGAGAGATTGAAACGTCTATGCCTTCCGC-ATTTCCAAGATGTTGGTC- 771
|||||||||||||| ||||| | ||||| || ||||| | || || | ||||| | ||
Sbjct 670 GATTTTACAACAGAAAGATTTACGCGTCTGTGTCTTCCACCATCTC-AGGATGT-G-TCT 726
Query 772 AC-ATGGTTCTATCAGTTGTTAGAG-AAGAACACCTCTCAATATTACATTGGAC-TCG-T 827
| |||| ||||||||||||| ||| || |||| |||||| | ||| | | | | | |
Sbjct 727 AAGATGGCTCTATCAGTTGTTGGAGGAA-AACAACTCTCACTGTTA-AGTCAAAGT-GAT 783
Query 828 ACTACATCAAAGAT---GGAGATATGGATAACCAATAACATTGA 868
| |||||||||||| |||||| ||| | ||||||| |||||
Sbjct 784 AGTACATCAAAGATAATGGAGATGTGGGTGACCAATATTATTGA 827
> AT4G17200.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:9651108-9652253 FORWARD LENGTH=1146
Length=1146
Score = 69.4 bits (37), Expect = 6e-11
Identities = 41/43 (95%), Gaps = 0/43 (0%)
Strand=Plus/Plus
Query 549 GAAATATACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGATG 591
||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 490 GAAATCTACGACTTTAGCTCTGATTCATGGAGGGTTCTTGATG 532
> AT3G49510.1 | Symbols: | F-box family protein | chr3:18353842-18356508
FORWARD LENGTH=2038
Length=2038
Score = 67.6 bits (36), Expect = 2e-10
Identities = 38/39 (97%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 553 TATACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGATG 591
||||||| |||||||||||||||||||||||||||||||
Sbjct 579 TATACGATTTTAGCTCTGATTCATGGAGGGTTCTTGATG 617
> AT1G54550.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:20369651-20370986 FORWARD LENGTH=1336
Length=1336
Score = 62.1 bits (33), Expect = 1e-08
Identities = 35/36 (97%), Gaps = 0/36 (0%)
Strand=Plus/Plus
Query 555 TACGAGTTTAGCTCTGATTCATGGAGGGTTCTTGAT 590
||||| ||||||||||||||||||||||||||||||
Sbjct 552 TACGATTTTAGCTCTGATTCATGGAGGGTTCTTGAT 587
Score = 52.8 bits (28), Expect = 6e-06
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 640 GCGTGTCTTTGAAGGGAAATACTTACTT 667
||||||||||||||||||||||||||||
Sbjct 625 GCGTGTCTTTGAAGGGAAATACTTACTT 652
> AT3G44120.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:15878399-15879817 REVERSE LENGTH=1419
Length=1419
Score = 60.2 bits (32), Expect = 4e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 948 GACGAGGAGAAGAAAGTCGTCTTGTGTTGTAA 979
||||||||||||||||||||||||||||||||
Sbjct 994 GACGAGGAGAAGAAAGTCGTCTTGTGTTGTAA 1025
> AT3G20690.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7231570-7232682 REVERSE LENGTH=1113
Length=1113
Score = 56.5 bits (30), Expect = 5e-07
Identities = 83/106 (78%), Gaps = 13/106 (12%)
Strand=Plus/Plus
Query 635 AAG-TGGCGTGTCTTTGAAGGGAAATACTTACTTGT-TCGCGTAT-GAT-GTTGA--AGA 688
||| ||||||||||||||||||||||||||||| || | || || ||| | || |||
Sbjct 605 AAGATGGCGTGTCTTTGAAGGGAAATACTTACTGGTAT-GC-TAAAGATAGAAGATCAGA 662
Query 689 AAATTCTAGATTTTTACTTATG-TTTGATTTTACAACAGAGAGATT 733
| ||| | |||| | | ||| ||||||||||| | |||||||||
Sbjct 663 AGATTGTT-ATTTA-A-T-ATGCTTTGATTTTACTAGAGAGAGATT 704
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51138361646
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5