BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930275
Length=1471
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22810.1 | Symbols: | Plant protein of unknown function (DU... 2218 0.0
AT4G14740.1 | Symbols: | Plant protein of unknown function (DU... 1014 0.0
> AT3G22810.1 | Symbols: | Plant protein of unknown function (DUF828)
with plant pleckstrin homology-like region | chr3:8068516-8071559
FORWARD LENGTH=1498
Length=1498
Score = 2218 bits (1201), Expect = 0.0
Identities = 1374/1455 (94%), Gaps = 21/1455 (1%)
Strand=Plus/Plus
Query 1 TtctctctctctctGTAAAAATGGAAAAACCAGTGCTTCCACCATGGCGTTCCGACCCAA 60
|||||| ||||||||| |||||||| ||||||||| || |||||||||||||||| ||||
Sbjct 61 TTCTCTTTCTCTCTGT-AAAATGGAGAAACCAGTGTTTGCACCATGGCGTTCCGA-CCAA 118
Query 61 -TTTTCCGGCCACCGGAGACACCATTAGAGCCGATGGAGTTTCTCTCTCGCTCTTGGAGT 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 119 GTTTTCCGGCCACCGGAGACACCATTAGAGCCGATGGAGTTTCTCTCTCGCTCCTGGAGC 178
Query 120 GTTTCAGCTCACGAAGTCTCCAAAGCTCTCACTCCTTCTCAGCAAATCCTCTC-TAAGAA 178
|| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 179 GTATCAGCTCACGAAGTCTCCAAAGCTCTCACTCCTTCTCAGCAACTCCTCTCAAAAGCC 238
Query 179 TACAATCGAAAGCACCACCGTCATTCTCGAAGAAGAACAACCCATCACCGCCGGCGAGAC 238
| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||||
Sbjct 239 T-CAATCGAAAACACCACCGTCATTCTC---GAAG---AACCCATCGCCGCCGGCGAGAC 291
Query 239 TGAAACGGAGGAGAACAGCTTCGTCTCCGGAAACCCTTTCTCCTTCGCTTGCTCCGAAAC 298
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 292 CGAAACGGAGGACAACAGCTTCGTCTCCGGAAACCCTTTCTCCTTCGCTTGCTCAGAAAC 351
Query 299 TTCTCAGATGGTCATGGATCGTATCTTGTCTCAGTCTCAGGAAGTGTCGCCACGAACATC 358
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 352 TTCTCAGATGGTCATGGATCGTATCTTATCTCAGTCTCAGGAAGTGTCGCCACGAACATC 411
Query 359 TGGTCGGCTTTCTCATAGCAGCGGTCCTCTCAATGGTTCTTTAACCGACAGTCCTCCGAT 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 TGGTCGGCTTTCTCATAGCAGCGGTCCTCTCAATGGTTCTTTAACCGACAGTCCTCCGAT 471
Query 419 TTCACCGCATGAAGTCGACGACATTAAGCAATTTTGTCGATCAAACAATAACTTCAACTC 478
||| |||||| ||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct 472 TTCGCCGCATCAAGTCGACGACATTAAGCAATTTTGCCGATCAAACAACAATTTCAACTC 531
Query 479 TCAATTCCGTTCAACGGGAACAACTCCGGGACCTATAACGGCAACAACCACACAGTCCAA 538
||||| |||||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 532 TCAATACCGTTCAACGGGAACAACTCCGGGACCTATCACTGCAACAACTACACAGTCCAA 591
Query 539 GACGGTTGGACGGTGGTTGAAAGACCGGAGGGAGAAAAAGAAGGAAGAGACT-AGGGCAC 597
||| ||||||||||||||||||||| |||||||||||||||||||||||| | || ||||
Sbjct 592 GACAGTTGGACGGTGGTTGAAAGACAGGAGGGAGAAAAAGAAGGAAGAGA-TGAGAGCAC 650
Query 598 ACAATGCTCAGATACATGCTGCTGTATCCGTTGCTGGTGTGGCAGCTGCGGTGGCTGCTA 657
|||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct 651 ACAATGCTCAGATACATGCTGCTGTATCAGTAGCTGGTGTGGCAGCCGCGGTGGCTGCTA 710
Query 658 TCGCGGCTGCAACCGCTGCTTCGTCGAGCT-CTGGGAAAGATGAGAATATGGCTAAAACG 716
||||||||||||| |||||||||||||| | |||| |||||||||||||||||||| |||
Sbjct 711 TCGCGGCTGCAACTGCTGCTTCGTCGAG-TGCTGGAAAAGATGAGAATATGGCTAAGACG 769
Query 717 GATATGGCTGTGGCTTCTGCTGCAACACTTGTGGCTGCTCAATGTGTGGAGGCTGCTGAA 776
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 770 GATATGGCTGTGGCTTCTGCTGCAACACTTGTGGCTGCTCAATGTGTGGAAGCTGCTGAA 829
Query 777 GTTATGGGAGCTGAGAGGGATCATTTAGCTTCTGTTGTTAGTTCTGCTGTTAATGTTCGA 836
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 830 GTTATGGGAGCTGAGAGGGATCATTTAGCTTCCGTTGTTAGTTCTGCTGTTAATGTTCGA 889
Query 837 TCCGCCGGAGATATCATGACATTAACTGCTGGAGCAGCTACAGCGTTAAGAGGAGTGGCT 896
|| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 890 TCTGCGGGAGATATCATGACATTAACCGCTGGAGCAGCCACAGCGTTAAGAGGAGTGGCT 949
Query 897 ACATTGAAGGCGAGGGCGATGAAGGAGGTGTGGAACATTGCATCAGTTATTCCAATGGAT 956
||||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 950 ACATTGAAGGCTAGAGCTATGAAGGAGGTGTGGCACATTGCATCAGTTATTCCAATGGAT 1009
Query 957 AAAGGAATCAATCCCGGAGGTTGCAGCAATGTTAATGGTAACGGTAATGGTAGCAATGTC 1016
||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||
Sbjct 1010 AAAGGAATCAATCTCGGAGGTTGCAGCAATGTTAATGGTAACGG----G--AGCTATGTC 1063
Query 1017 AGCTCAAGCAGCAGTCACAGTGGCGAATTTCTAGTTGAGGATAATTTCTTGGGACATTGC 1076
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064 AGCTCAAGCAGCAGTCATAGTGGCGAATTTCTAGTTGAGGATAATTTCTTGGGACATTGC 1123
Query 1077 AACAGAGAATGGCTTGCTCGAGGTGGCCAGCTTCTTAAACGTACCCGCAAAGGTGATCTT 1136
|| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1124 AATAGAGAATGGCTTGCTCGAGGTGGCCAACTTCTTAAACGCACCCGCAAAGGTGATCTT 1183
Query 1137 CATTGGAAAATAGTTTCTGTTTACATAAATAGGCTAAATCAAGTTATATTGAAGATGAAG 1196
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1184 CATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAAGTTATATTGAAGATGAAG 1243
Query 1197 AGCAGGCATGTAGGAGGGACCTTCACAAAGAAGAACAAAAATGTTGTGATTGATGTGATC 1256
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1244 AGCAGGCATGTAGGAGGGACCTTCACGAAGAAGAACAAAAATGTTGTGATTGATGTGATC 1303
Query 1257 AAAAACATTCCGGCTTGGCCAGGCCGCCATTTGCTGGAAGGAGGAGAGGATTTGAGATAC 1316
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1304 AAAAACGTTCAAGCTTGGCCAGGCCGCCATTTGCTGGAAGGAGGAGAGGATTTGAGATAC 1363
Query 1317 TTTGGGTTAAAGACGGTTCCGCGAGGGATTGTAGAATTTGAGTGCAAGAGTCAGAGAGAG 1376
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1364 TTTGGGTTAAAGACGGTTCCGCGAGGGATTGTAGAATTTCAGTGCAAGAGCCAGAGAGAG 1423
Query 1377 TATGAAATGTGGACACAAGGTGTCTCAAGGCTTCTTGCTGTTGCTGCCGAGAGGAATAAC 1436
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1424 TATGAAATGTGGACACAAGGTGTCTCAAGGCTTATTGCTGTTGCTGCCGAGAGGAATAAC 1483
Query 1437 AGATATAGGATATGA 1451
|||||||||||||||
Sbjct 1484 AGATATAGGATATGA 1498
> AT4G14740.1 | Symbols: | Plant protein of unknown function (DUF828)
with plant pleckstrin homology-like region | chr4:8450289-8454028
REVERSE LENGTH=1788
Length=1788
Score = 1014 bits (549), Expect = 0.0
Identities = 1175/1469 (80%), Gaps = 75/1469 (5%)
Strand=Plus/Plus
Query 3 ctctctctctctGTAAAAATGGAAAAAC-CAGTGCTTCC-ACCATGGCGTTCCGACCCAA 60
|||||||| ||| | ||||||||||||| || || |||| | ||||| | |||||||
Sbjct 65 CTCTCTCTTTCTTTCAAAATGGAAAAACTCA-TGGTTCCGA-CATGGAGACCCGACCCGG 122
Query 61 TTTTCCGGCCACCGGAGACACCATTAGAGCCGATGGAGTTTCTCTCTCGCTCTTGGAGTG 120
||| ||| |||||||| |||||| | || |||||||||||| | |||| || ||||| |
Sbjct 123 TTTACCGTCCACCGGAAACACCACTCGAACCGATGGAGTTTTTAGCTCGTTCATGGAGCG 182
Query 121 TTTCAGCTCACGAAGTCTCCAAAGCTCTCACTCCTTCTCAGCAAATCCTCTCTAAGAATA 180
| || |||| |||||||||||| ||||| || || | | | || || ||| || ||
Sbjct 183 TCTCTGCTCTCGAAGTCTCCAAGGCTCTAACACC-AC-C--C-AA-CC-CTC--AG-ATT 232
Query 181 CAATCGAAAGCACCACCGTCA-TTCTCGAAGAAGAACAACCCATCACCGCCGGCG-AGAC 238
| || || |||| | ||||||||| |||||||| || | | || ||||
Sbjct 233 C--TCCTCTCCAAAACCG-AAGAAGAAGAAGAAGAAGAACCCATCTCCTCTGTCGTAGAC 289
Query 239 TGAAAC-G-G--A-GG-AGA-A-CAG-CTTCGTCTCCGGAAACCCTTTCTCCTTCGCTTG 289
| || | | | || ||| | | | ||| ||| |||||||||| ||||||||||||||
Sbjct 290 GGCGACGGCGACACGGAAGACACCGGACTT-GTCACCGGAAACCCATTCTCCTTCGCTTG 348
Query 290 CTCCGAAACTTCTCAGATGGTCATGGATCGTATCTTGTCTCAGTCTCAGGAAGTGTCGCC 349
|| ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || ||
Sbjct 349 TTCAGAAACTTCTCAAATGGTCATGGATCGTATCTTGTCTCACTCTCAAGAAGTATCACC 408
Query 350 ACGAACATCTGGTCGGCTTTCTCATAGCAGCGGTCCTCTCAATGGTTCTTTAACCGACAG 409
| |||||||||||||||| ||||| || || ||||| || ||||||||||| ||||||||
Sbjct 409 AAGAACATCTGGTCGGCTATCTCACAGTAGTGGTCCACTTAATGGTTCTTTGACCGACAG 468
Query 410 TCCTCC-GATTTCACCGCATGAAGT-CGACGACATTAAGCAATTTT---G-TCGATC--A 461
|||||| | | || || | ||| | |||||||||||||||||||| | ||| | |
Sbjct 469 TCCTCCTG-TGTCTCCTCCCGAA-TCCGACGACATTAAGCAATTTTGCAGAGCGAACAAA 526
Query 462 AA--CAAT-AAC--T-TCAACTCTCAATTCCGTTCAACGG-GAACAACTCCGGGACCTAT 514
|| || | ||| | | || ||||| ||||||||||||| | ||||||||||||||||
Sbjct 527 AATTCATTGAACAGTGTAAATTCTCAGTTCCGTTCAACGGCG-GCAACTCCGGGACCTAT 585
Query 515 AACGGCAACAACCACACAGTCCAAGACGGTTGGACGGTGG-TTGAAAGACCGGAGGGAGA 573
||| || ||| | ||||||||||||||||| ||||||||| || || |||||||| ||||
Sbjct 586 AACCGCTACAGCTACACAGTCCAAGACGGTGGGACGGTGGCTT-AAGGACCGGAGAGAGA 644
Query 574 AAAAGAAGGAAGAGACTAGGGCACACAATGCTCAGATACATGCTGCTGTATCCGTTGCTG 633
||||||| || |||||| |||| || || |||||||| || |||||||| || || || |
Sbjct 645 AAAAGAAAGAGGAGACTCGGGCTCATAACGCTCAGATTCACGCTGCTGTCTCTGTCGCCG 704
Query 634 GTGTGGCAGCTGCGGTGGCTGCTATCGCGGCTGCAACCGCTGCTTCGTCGAGCTCTGGGA 693
| || || || || || |||||||| || || || |||||||| || || |||| ||| |
Sbjct 705 GCGTTGCTGCAGCTGTTGCTGCTATTGCAGCAGCCACCGCTGCGTCTTCTAGCTGTGGTA 764
Query 694 AAGATGAGAATATGGCTAAAACGGATATGGCTGTGGCTTCTGCTGCAACACTTGTGGCTG 753
| |||||| | ||||||||||| || ||||| || ||||||||||| || ||||||||||
Sbjct 765 AGGATGAGCAGATGGCTAAAACTGACATGGCCGTTGCTTCTGCTGCGACCCTTGTGGCTG 824
Query 754 CTCAATGTGTGGAGGCTGCTGAAGTTATGGGAGCTGAGAGGGA-TCATTTAGCTTCTGTT 812
|||| |||||||| |||||||||||||||||||||||||| || | |||| |||||||||
Sbjct 825 CTCAGTGTGTGGAAGCTGCTGAAGTTATGGGAGCTGAGAGAGAGT-ATTTGGCTTCTGTT 883
Query 813 GTTAGTTCTGCTGTTAATGTTCGATCCGCCGGAGATATCATGACAT-TAACTGCTGGAGC 871
||||| || || || |||||||| || ||||||||||| ||||| | | || || |||||
Sbjct 884 GTTAGCTCCGCCGTCAATGTTCGTTCTGCCGGAGATATTATGAC-TCTCACCGCCGGAGC 942
Query 872 AGCTACAGCGTTAAGAGGAGTGGC-TACATTGAAGGCGAGGGCGATGAAGGAGGTGTGGA 930
||||||||| ||||||||||| || ||||||||||| ||||| |||||||| |||||||
Sbjct 943 AGCTACAGCTTTAAGAGGAGT-GCAAACATTGAAGGCAAGGGCAATGAAGGAAGTGTGGA 1001
Query 931 ACATTGCATCAGTTATTCCAATGGATAAAGGAATCA-ATC--CCGGAGGTTGCAGCAATG 987
|||| |||||||| || ||||||||||||||| ||| || | ||||| |||||||
Sbjct 1002 ACATAGCATCAGTGATACCAATGGATAAAGGACTCACTTCTACAGGAGGAAGCAGCAA-- 1059
Query 988 TTAATGGTAACGGTAATGGTAGCAATGTCAGCTCAAGCAGCAGTCACAGTGGCGAATTTC 1047
|||| || |||||||||||||| ||||||||||| ||||||||||| ||| ||
Sbjct 1060 -TAAT-GT-----TAATGGTAGCAATGGAAGCTCAAGCAGTAGTCACAGTGGTGAACTTG 1112
Query 1048 TAGTTGAGGATAATTTCTTGGG-ACATTGCAACAGAGAATGGCTTGCTCGAGGTGGCCAG 1106
|| |||| ||||||||||| || ||| | ||||||||||| ||| ||||| | |
Sbjct 1113 TACAACAGGAGAATTTCTTGGGAAC-TTGTAGTAGAGAATGGCTCGCTAGAGGTTGTGAA 1171
Query 1107 CTTCTTAAACGTACCCGCAAAGGTGATCTTCATTGGAAAATAGTTTCTGTTTACATAAAT 1166
|| || ||||| || |||||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct 1172 CTCCTCAAACGCACTCGCAAAGGTGATCTCCACTGGAAGATAGTATCTGTTTACATCAAC 1231
Query 1167 AGGCTAAATCAAGTTATATTGAAGATGAAGAGCAGGCATGTAGGAGGGACCTTCACAAAG 1226
| | ||||| ||||| ||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 1232 AAAATGAATCAGGTTATGTTGAAGATGAAGAGCAGGCATGTTGGAGGAACCTTCACCAAG 1291
Query 1227 AAGAACAAA-AATGTTGTGATTGATGTGATCAAAAACATTCCGGCTTGGCCAGGCCGCCA 1285
||||| ||| || ||||| ||||||||||||| || | ||||| ||||| || || ||
Sbjct 1292 AAGAA-AAAGAACATTGTGCTTGATGTGATCAAGAATGTCCCGGCCTGGCCTGGACGACA 1350
Query 1286 TTTGCTGGAAGGAGGAGAGGATTTGAGATACTTTGGGTTAAAGACGGTTCCGCGAGG-GA 1344
|||||| || |||||||| ||| | |||||||| || || ||||||||| |||||| ||
Sbjct 1351 TTTGCTAGAGGGAGGAGATGATCTAAGATACTTCGGTTTGAAGACGGTTATGCGAGGTGA 1410
Query 1345 TTGTAGAATTTGA-GTGCAAGAGTCAGAGAGAGTATGAAATGTGGACACAAGGTGTCTCA 1403
||| ||||| || || |||||| || || || |||||||||||||||||||||||||||
Sbjct 1411 -TGTTGAATTCGAGGT-CAAGAGCCAAAGGGAATATGAAATGTGGACACAAGGTGTCTCA 1468
Query 1404 AGGCTTCTTGCTGTTGCTGCCGAGAGGAA 1432
|||||||||| | ||||||| ||||||||
Sbjct 1469 AGGCTTCTTGTTCTTGCTGCTGAGAGGAA 1497
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72539787525
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5